RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C SEY1Q99287 776 aa1.2□□□□□ -2.22
CMS1YLR003C CDC7P06243 507 aa1.19□□□□□ -2.22
CMS1YLR003C APS1P35181 156 aa1.19□□□□□ -2.22
CMS1YLR003C MRPL28P36527 147 aa1.19□□□□□ -2.22
CMS1YLR003C RSM25P40496 264 aa1.19□□□□□ -2.22
CMS1YLR003C TIR3P40552 269 aa1.19□□□□□ -2.22
CMS1YLR003C EAF6P47128 113 aa1.19□□□□□ -2.22
CMS1YLR003C SML1Q04964 104 aa1.19□□□□□ -2.22
CMS1YLR003C GIS3Q12418 502 aa1.19□□□□□ -2.22
CMS1YLR003C YKL183C-AQ3E765 70 aa1.19□□□□□ -2.22
CMS1YLR003C COQ1P18900 473 aa1.18□□□□□ -2.22
CMS1YLR003C PBN1P25580 416 aa1.18□□□□□ -2.22
CMS1YLR003C PRP18P33411 251 aaPredicted RBP1.18□□□□□ -2.22
CMS1YLR003C YNL217WP40152 326 aa1.18□□□□□ -2.22
CMS1YLR003C RAD17P48581 401 aa1.18□□□□□ -2.22
CMS1YLR003C YNL010WP53981 241 aaKnown RBP1.18□□□□□ -2.22
CMS1YLR003C RUD3Q12234 484 aaKnown RBP1.18□□□□□ -2.22
CMS1YLR003C YHR214C-EQ8TGK0 99 aa1.18□□□□□ -2.22
CMS1YLR003C ARG80P07249 177 aa1.17□□□□□ -2.22
CMS1YLR003C RPL27BP0C2H7 136 aaKnown RBP1.17□□□□□ -2.22
CMS1YLR003C IDH1P28834 360 aaKnown RBP RIP-Chip data1.17□□□□□ -2.22not detected
CMS1YLR003C MEI4P29467 408 aa1.17□□□□□ -2.22
CMS1YLR003C MGM101P32787 269 aaKnown RBP1.17□□□□□ -2.22
CMS1YLR003C FZF1P32805 299 aa1.17□□□□□ -2.22
CMS1YLR003C PTM1P32857 523 aa1.17□□□□□ -2.22
CMS1YLR003C AVT2P39981 480 aa1.17□□□□□ -2.22
CMS1YLR003C GLE2P40066 365 aa1.17□□□□□ -2.22
CMS1YLR003C ICE2P40499 491 aa1.17□□□□□ -2.22
CMS1YLR003C MSS2P40990 351 aa1.17□□□□□ -2.22
CMS1YLR003C YRB1P41920 201 aaKnown RBP1.17□□□□□ -2.22
CMS1YLR003C FAR7P43592 221 aa1.17□□□□□ -2.22
CMS1YLR003C BOL2P53082 120 aa1.17□□□□□ -2.22
CMS1YLR003C YNR077CP53758 84 aa1.17□□□□□ -2.22
CMS1YLR003C BUD25P85052 153 aa1.17□□□□□ -2.22
CMS1YLR003C REP2P03872 296 aa1.16□□□□□ -2.22
CMS1YLR003C CDC33P07260 213 aaKnown RBP1.16□□□□□ -2.22
CMS1YLR003C SPS18P32572 300 aa1.16□□□□□ -2.22
CMS1YLR003C YET1P35723 206 aa1.16□□□□□ -2.22
CMS1YLR003C CWC23P52868 283 aaPredicted RBP1.16□□□□□ -2.22
CMS1YLR003C BNA7Q04066 261 aa1.16□□□□□ -2.22
CMS1YLR003C RNH1Q04740 348 aa1.16□□□□□ -2.22
CMS1YLR003C YPL162CQ12042 273 aa1.16□□□□□ -2.22
CMS1YLR003C TSC3Q3E790 80 aa1.16□□□□□ -2.22
CMS1YLR003C PDR18P53756 1333 aa1.15□□□□□ -2.22
CMS1YLR003C CYR1P08678 2026 aaKnown RBP1.15□□□□□ -2.22
CMS1YLR003C YDR157WA0A023PZE8 133 aa1.15□□□□□ -2.23
CMS1YLR003C TIM9O74700 87 aa1.15□□□□□ -2.23
CMS1YLR003C GCN3P14741 305 aa1.15□□□□□ -2.23
CMS1YLR003C SVP26P38869 228 aa1.15□□□□□ -2.23
CMS1YLR003C YRB2P40517 327 aa1.15□□□□□ -2.23
CMS1YLR003C MGA1P53050 456 aa1.15□□□□□ -2.23
CMS1YLR003C DID2P69771 204 aa1.15□□□□□ -2.23
CMS1YLR003C SWP1Q02795 286 aa1.15□□□□□ -2.23
CMS1YLR003C CSI2Q08054 341 aa1.15□□□□□ -2.23
CMS1YLR003C MDM32Q12171 622 aa1.15□□□□□ -2.23
CMS1YLR003C PRX1P34227 261 aaKnown RBP1.14□□□□□ -2.23
CMS1YLR003C MRPL17P36528 281 aa1.14□□□□□ -2.23
CMS1YLR003C SAY1P53324 424 aa1.14□□□□□ -2.23
CMS1YLR003C PDR17P53844 350 aa1.14□□□□□ -2.23
CMS1YLR003C PGA2P53903 129 aa1.14□□□□□ -2.23
CMS1YLR003C YRA1Q12159 226 aaKnown RBP1.14□□□□□ -2.23
CMS1YLR003C RPL25P04456 142 aaKnown RBP1.13□□□□□ -2.23
CMS1YLR003C QCR8P08525 94 aa1.13□□□□□ -2.23
CMS1YLR003C KSS1P14681 368 aa1.13□□□□□ -2.23
CMS1YLR003C SNC2P33328 115 aa1.13□□□□□ -2.23
CMS1YLR003C UTP30P36144 274 aaKnown RBP1.13□□□□□ -2.23
CMS1YLR003C UMP1P38293 148 aa1.13□□□□□ -2.23
CMS1YLR003C DOC1P53068 250 aa1.13□□□□□ -2.23
CMS1YLR003C YLR162WQ06235 118 aa1.13□□□□□ -2.23
CMS1YLR003C MCP1Q12106 302 aa1.13□□□□□ -2.23
CMS1YLR003C YFR032C-BQ8TGU2 87 aa1.13□□□□□ -2.23
CMS1YLR003C URA5P13298 226 aaKnown RBP1.12□□□□□ -2.23
CMS1YLR003C CBF1P17106 351 aa1.12□□□□□ -2.23
CMS1YLR003C FPR1P20081 114 aaKnown RBP1.12□□□□□ -2.23
CMS1YLR003C BET1P22804 142 aa1.12□□□□□ -2.23
CMS1YLR003C TCA17P32613 152 aa1.12□□□□□ -2.23
CMS1YLR003C TRM5P38793 499 aa1.12□□□□□ -2.23
CMS1YLR003C YER135CP40082 130 aa1.12□□□□□ -2.23
CMS1YLR003C GVP36P40531 326 aaKnown RBP1.12□□□□□ -2.23
CMS1YLR003C GCN20P43535 752 aaKnown RBP1.12□□□□□ -2.23
CMS1YLR003C YDR274CP87283 123 aa1.12□□□□□ -2.23
CMS1YLR003C YOL160WQ08321 113 aa1.12□□□□□ -2.23
CMS1YLR003C NCB2Q92317 146 aa1.12□□□□□ -2.23
CMS1YLR003C HTB1P02293 131 aaKnown RBP1.11□□□□□ -2.23
CMS1YLR003C HTB2P02294 131 aa1.11□□□□□ -2.23
CMS1YLR003C CPA1P07258 411 aaKnown RBP1.11□□□□□ -2.23
CMS1YLR003C MER1P16523 270 aa1.11□□□□□ -2.23
CMS1YLR003C YGL010WP25338 174 aa1.11□□□□□ -2.23
CMS1YLR003C NTG1P31378 399 aa1.11□□□□□ -2.23
CMS1YLR003C GAA1P39012 614 aa1.11□□□□□ -2.23
CMS1YLR003C ERJ5P43613 295 aaPredicted RBP1.11□□□□□ -2.23
CMS1YLR003C IRC18P47056 224 aa1.11□□□□□ -2.23
CMS1YLR003C AIM25P47140 327 aa1.11□□□□□ -2.23
CMS1YLR003C NUP49Q02199 472 aa1.11□□□□□ -2.23
CMS1YLR003C CDC36P06100 191 aaPredicted RBP1.1□□□□□ -2.23
CMS1YLR003C CKS1P20486 150 aaKnown RBP1.1□□□□□ -2.23
CMS1YLR003C SEC17P32602 292 aa1.1□□□□□ -2.23
CMS1YLR003C YCR087C-AP37263 153 aa1.1□□□□□ -2.23
CMS1YLR003C SIP3P38717 1229 aa1.1□□□□□ -2.23
CMS1YLR003C TVP23P38962 199 aa1.1□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 96.3 ms