RNA–Protein interactions for RNA: YKR101W

SIR1, Transcript of Protein involved in silencing at mating-type loci HML and HMR, yeastyeast

Gene SIR1, Length 1,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR1YKR101W CUP2P15315 225 aa3.42□□□□□ -1.86
SIR1YKR101W MAK31P23059 88 aa3.42□□□□□ -1.86
SIR1YKR101W OAC1P32332 324 aa3.42□□□□□ -1.86
SIR1YKR101W ERG10P41338 398 aaKnown RBP3.42□□□□□ -1.86
SIR1YKR101W DIA1P54005 336 aa3.42□□□□□ -1.86
SIR1YKR101W YPL150WQ12152 901 aa3.42□□□□□ -1.86
SIR1YKR101W SMT3Q12306 101 aaKnown RBP3.42□□□□□ -1.86
SIR1YKR101W EMP46Q12396 444 aa3.42□□□□□ -1.86
SIR1YKR101W SOD1P00445 154 aaKnown RBP3.41□□□□□ -1.86
SIR1YKR101W SEC22P22214 214 aa3.41□□□□□ -1.86
SIR1YKR101W PDR17P53844 350 aa3.41□□□□□ -1.86
SIR1YKR101W YOL163WP0CF20 169 aa3.4□□□□□ -1.86
SIR1YKR101W ATP7P30902 174 aa3.4□□□□□ -1.86
SIR1YKR101W TRR2P38816 342 aa3.4□□□□□ -1.86
SIR1YKR101W TEM1P38987 245 aa3.4□□□□□ -1.86
SIR1YKR101W BXI1P48558 297 aa3.4□□□□□ -1.86
SIR1YKR101W NOT5Q12514 560 aaPredicted RBP3.4□□□□□ -1.86
SIR1YKR101W MRPS9P38120 278 aa3.4□□□□□ -1.87
SIR1YKR101W GRE3P38715 327 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
SIR1YKR101W CAT5P41735 233 aa3.4□□□□□ -1.87
SIR1YKR101W YFR045WP43617 309 aa3.4□□□□□ -1.87
SIR1YKR101W ERV29P53337 310 aa3.4□□□□□ -1.87
SIR1YKR101W HST4P53688 370 aa3.4□□□□□ -1.87
SIR1YKR101W MSA2P36157 363 aa3.39□□□□□ -1.87
SIR1YKR101W SSH1P38353 490 aaKnown RBP3.39□□□□□ -1.87
SIR1YKR101W YER189WP40104 122 aa3.39□□□□□ -1.87
SIR1YKR101W YGL159WP53110 370 aa3.39□□□□□ -1.87
SIR1YKR101W PET191Q02772 108 aa3.39□□□□□ -1.87
SIR1YKR101W YLR030WQ07967 263 aa3.39□□□□□ -1.87
SIR1YKR101W GPM2Q12008 311 aa3.39□□□□□ -1.87
SIR1YKR101W ARC19P33204 171 aaKnown RBP3.38□□□□□ -1.87
SIR1YKR101W SFC1P33303 322 aa3.38□□□□□ -1.87
SIR1YKR101W ECM4P36156 370 aa3.38□□□□□ -1.87
SIR1YKR101W HOP2P53187 214 aa3.38□□□□□ -1.87
SIR1YKR101W FCF1Q05498 189 aaPredicted RBP3.38□□□□□ -1.87
SIR1YKR101W IES3Q12345 250 aa3.38□□□□□ -1.87
SIR1YKR101W ISD11Q6Q560 94 aa3.38□□□□□ -1.87
SIR1YKR101W DUR1,2P32528 1835 aaKnown RBP3.38□□□□□ -1.87
SIR1YKR101W YIL001WP40560 513 aa3.38□□□□□ -1.87
SIR1YKR101W FLO1P32768 1537 aa3.37□□□□□ -1.87
SIR1YKR101W BMH1P29311 267 aaKnown RBP3.37□□□□□ -1.87
SIR1YKR101W PHO88P38264 188 aaPredicted RBP3.37□□□□□ -1.87
SIR1YKR101W ALG9P53868 555 aaKnown RBP3.37□□□□□ -1.87
SIR1YKR101W YDR248CQ03786 193 aa3.37□□□□□ -1.87
SIR1YKR101W SLD7Q08457 257 aa3.37□□□□□ -1.87
SIR1YKR101W GEP5Q12393 293 aa3.37□□□□□ -1.87
SIR1YKR101W YEL009C-AA0A023PZF2 135 aa3.36□□□□□ -1.87
SIR1YKR101W IPP1P00817 287 aaKnown RBP3.36□□□□□ -1.87
SIR1YKR101W GCN3P14741 305 aa3.36□□□□□ -1.87
SIR1YKR101W MIG2P53035 382 aa3.36□□□□□ -1.87
SIR1YKR101W GIM5Q04493 163 aa3.36□□□□□ -1.87
SIR1YKR101W PST1Q12355 444 aa3.36□□□□□ -1.87
SIR1YKR101W YLR462WO13556 202 aa3.36□□□□□ -1.87
SIR1YKR101W RPL35AP0CX84 120 aaKnown RBP3.36□□□□□ -1.87
SIR1YKR101W RPL35BP0CX85 120 aaKnown RBP3.36□□□□□ -1.87
SIR1YKR101W ZWF1P11412 505 aaKnown RBP3.36□□□□□ -1.87
SIR1YKR101W TRM5P38793 499 aa3.36□□□□□ -1.87
SIR1YKR101W YEL075CP39972 122 aa3.36□□□□□ -1.87
SIR1YKR101W COG3P40094 801 aa3.36□□□□□ -1.87
SIR1YKR101W RPA43P46669 326 aa3.36□□□□□ -1.87
SIR1YKR101W FLC3P53121 802 aa3.36□□□□□ -1.87
SIR1YKR101W MMS2P53152 137 aa3.36□□□□□ -1.87
SIR1YKR101W RSM10Q03201 203 aa3.36□□□□□ -1.87
SIR1YKR101W YMR279CQ03263 540 aa3.36□□□□□ -1.87
SIR1YKR101W TAO3P40468 2376 aa3.35□□□□□ -1.87
SIR1YKR101W RNP1P32385 249 aa3.35□□□□□ -1.87
SIR1YKR101W EGD2P38879 174 aaKnown RBP3.35□□□□□ -1.87
SIR1YKR101W SEC72P39742 193 aaKnown RBP3.35□□□□□ -1.87
SIR1YKR101W PFS2P42841 465 aaKnown RBP3.35□□□□□ -1.87
SIR1YKR101W RSM27P53305 110 aa3.35□□□□□ -1.87
SIR1YKR101W NIP7Q08962 181 aaKnown RBP3.35□□□□□ -1.87
SIR1YKR101W AGC1Q12482 902 aa3.35□□□□□ -1.87
SIR1YKR101W SEC4P07560 215 aaKnown RBP3.34□□□□□ -1.87
SIR1YKR101W ERG24P32462 438 aaKnown RBP3.34□□□□□ -1.87
SIR1YKR101W APS1P35181 156 aa3.34□□□□□ -1.87
SIR1YKR101W MRPL28P36527 147 aa3.34□□□□□ -1.87
SIR1YKR101W ECM14P38836 430 aa3.34□□□□□ -1.87
SIR1YKR101W HMF1P40037 129 aaKnown RBP3.34□□□□□ -1.87
SIR1YKR101W RTC4P53850 401 aa3.34□□□□□ -1.87
SIR1YKR101W USB1Q12208 290 aaKnown RBP3.34□□□□□ -1.87
SIR1YKR101W SGA1P08019 549 aa3.34□□□□□ -1.88
SIR1YKR101W KSS1P14681 368 aa3.34□□□□□ -1.88
SIR1YKR101W PRY2P36110 329 aa3.34□□□□□ -1.88
SIR1YKR101W GIS2P53849 153 aaKnown RBP RIP-Chip data3.34□□□□□ -1.88not detected
SIR1YKR101W FUS2Q05670 677 aa3.34□□□□□ -1.88
SIR1YKR101W YNG1Q08465 219 aa3.34□□□□□ -1.88
SIR1YKR101W GSC2P40989 1895 aa3.33□□□□□ -1.88
SIR1YKR101W RAD10P06838 210 aa3.33□□□□□ -1.88
SIR1YKR101W AST1P35183 429 aa3.33□□□□□ -1.88
SIR1YKR101W FAR7P43592 221 aa3.33□□□□□ -1.88
SIR1YKR101W ECO1P43605 281 aa3.33□□□□□ -1.88
SIR1YKR101W YML096WQ04489 525 aa3.33□□□□□ -1.88
SIR1YKR101W SUE1Q06524 206 aa3.33□□□□□ -1.88
SIR1YKR101W TVP38P36164 337 aa3.32□□□□□ -1.88
SIR1YKR101W ILM1P47155 203 aa3.32□□□□□ -1.88
SIR1YKR101W HTL1Q9URQ5 78 aa3.32□□□□□ -1.88
SIR1YKR101W HIS3P06633 220 aa3.32□□□□□ -1.88
SIR1YKR101W DSF1P0CX08 502 aa3.32□□□□□ -1.88
SIR1YKR101W YNR073CP0CX09 502 aa3.32□□□□□ -1.88
SIR1YKR101W TKL2P33315 681 aa3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms