RNA–Protein interactions for RNA: YIL156W

UBP7, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeast

Gene UBP7, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP7	YIL156W	LSM4	P40070	187 aa	Known RBP	4.09	□□□□□ -1.76
UBP7	YIL156W	BIR1	P47134	954 aa		4.09	□□□□□ -1.76
UBP7	YIL156W	YDR124W	Q04608	324 aa		4.09	□□□□□ -1.76
UBP7	YIL156W	YLR281C	Q05863	155 aa		4.09	□□□□□ -1.76
UBP7	YIL156W	YLR031W	Q07978	186 aa		4.09	□□□□□ -1.76
UBP7	YIL156W	FDH1	Q08911	376 aa		4.09	□□□□□ -1.76
UBP7	YIL156W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.09	□□□□□ -1.76
UBP7	YIL156W	YCR023C	P25351	611 aa		4.08	□□□□□ -1.76
UBP7	YIL156W	VMA22	P38784	181 aa		4.08	□□□□□ -1.76
UBP7	YIL156W	BDH1	P39714	382 aa		4.08	□□□□□ -1.76
UBP7	YIL156W	FMP32	P43557	207 aa		4.08	□□□□□ -1.76
UBP7	YIL156W	MPA43	P53583	542 aa	Predicted RBP	4.08	□□□□□ -1.76
UBP7	YIL156W	HRI1	Q05905	244 aa	Known RBP	4.08	□□□□□ -1.76
UBP7	YIL156W	YER186C	P40101	306 aa		4.08	□□□□□ -1.76
UBP7	YIL156W	STB1	P42845	420 aa		4.08	□□□□□ -1.76
UBP7	YIL156W	LSM7	P53905	115 aa	Known RBP	4.08	□□□□□ -1.76
UBP7	YIL156W	AIM34	Q03673	198 aa		4.08	□□□□□ -1.76
UBP7	YIL156W	SPC24	Q04477	213 aa		4.08	□□□□□ -1.76
UBP7	YIL156W	YOL160W	Q08321	113 aa		4.08	□□□□□ -1.76
UBP7	YIL156W	CMD1	P06787	147 aa	Known RBP	4.08	□□□□□ -1.76
UBP7	YIL156W	FLC3	P53121	802 aa		4.08	□□□□□ -1.76
UBP7	YIL156W	ERV29	P53337	310 aa		4.08	□□□□□ -1.76
UBP7	YIL156W	EFG1	Q3E705	233 aa	Known RBP	4.08	□□□□□ -1.76
UBP7	YIL156W	YBL008W-A	Q3E821	79 aa		4.08	□□□□□ -1.76
UBP7	YIL156W	YCR090C	P25654	182 aa	Known RBP	4.07	□□□□□ -1.76
UBP7	YIL156W	FMP48	P53233	369 aa		4.07	□□□□□ -1.76
UBP7	YIL156W	HNT1	Q04344	158 aa	Known RBP	4.07	□□□□□ -1.76
UBP7	YIL156W	JID1	Q12350	301 aa		4.07	□□□□□ -1.76
UBP7	YIL156W	IZH2	Q12442	317 aa		4.07	□□□□□ -1.76
UBP7	YIL156W	MAK3	Q03503	176 aa		4.07	□□□□□ -1.76
UBP7	YIL156W	YMR317W	Q04893	1140 aa		4.07	□□□□□ -1.76
UBP7	YIL156W	RPL21B	Q12672	160 aa	Known RBP	4.07	□□□□□ -1.76
UBP7	YIL156W	YAL063C-A	Q3E791	96 aa		4.07	□□□□□ -1.76
UBP7	YIL156W	YHR214C-E	Q8TGK0	99 aa		4.07	□□□□□ -1.76
UBP7	YIL156W	KRE5	P22023	1365 aa		4.07	□□□□□ -1.76
UBP7	YIL156W	SDH3	P33421	198 aa		4.06	□□□□□ -1.76
UBP7	YIL156W	SHE3	P38272	425 aa	Known RBP	4.06	□□□□□ -1.76
UBP7	YIL156W	NKP2	Q06162	153 aa		4.06	□□□□□ -1.76
UBP7	YIL156W	HSK3	P69852	69 aa		4.06	□□□□□ -1.76
UBP7	YIL156W	LYS2	P07702	1392 aa		4.06	□□□□□ -1.76
UBP7	YIL156W	IDP1	P21954	428 aa	Known RBP	4.06	□□□□□ -1.76
UBP7	YIL156W	SLM6	P38343	150 aa		4.06	□□□□□ -1.76
UBP7	YIL156W	XBP1	P40489	647 aa		4.06	□□□□□ -1.76
UBP7	YIL156W	VMA10	P48836	114 aa	Known RBP	4.06	□□□□□ -1.76
UBP7	YIL156W	HST4	P53688	370 aa		4.06	□□□□□ -1.76
UBP7	YIL156W	SWI1	P09547	1314 aa		4.06	□□□□□ -1.76
UBP7	YIL156W	RAD50	P12753	1312 aa		4.06	□□□□□ -1.76
UBP7	YIL156W	SCO1	P23833	295 aa		4.05	□□□□□ -1.76
UBP7	YIL156W	YCR043C	P25361	127 aa		4.05	□□□□□ -1.76
UBP7	YIL156W	BUB2	P26448	306 aa	Predicted RBP	4.05	□□□□□ -1.76
UBP7	YIL156W	DOG1	P38774	246 aa		4.05	□□□□□ -1.76
UBP7	YIL156W	EDC2	P40023	145 aa	Predicted RBP	4.05	□□□□□ -1.76
UBP7	YIL156W	CAT5	P41735	233 aa		4.05	□□□□□ -1.76
UBP7	YIL156W	RRG7	Q08774	242 aa	Predicted RBP	4.05	□□□□□ -1.76
UBP7	YIL156W	PTM1	P32857	523 aa		4.05	□□□□□ -1.76
UBP7	YIL156W	PHO89	P38361	574 aa		4.05	□□□□□ -1.76
UBP7	YIL156W	EFM1	P38732	585 aa		4.05	□□□□□ -1.76
UBP7	YIL156W	CIN5	P40917	295 aa		4.05	□□□□□ -1.76
UBP7	YIL156W	COQ5	P49017	307 aa		4.05	□□□□□ -1.76
UBP7	YIL156W	PRM8	P53174	237 aa		4.05	□□□□□ -1.76
UBP7	YIL156W	RNH201	P53942	307 aa		4.05	□□□□□ -1.76
UBP7	YIL156W	RPL25	P04456	142 aa	Known RBP	4.04	□□□□□ -1.76
UBP7	YIL156W	VHS1	Q03785	461 aa		4.04	□□□□□ -1.76
UBP7	YIL156W	TRM10	Q12400	293 aa		4.04	□□□□□ -1.76
UBP7	YIL156W	MHT1	Q12525	324 aa		4.04	□□□□□ -1.76
UBP7	YIL156W	YCL021W-A	Q96VH3	125 aa		4.04	□□□□□ -1.76
UBP7	YIL156W	SML1	Q04964	104 aa		4.04	□□□□□ -1.76
UBP7	YIL156W	RFU1	Q08003	200 aa		4.04	□□□□□ -1.76
UBP7	YIL156W	YPR011C	Q12251	326 aa		4.04	□□□□□ -1.76
UBP7	YIL156W	ERG24	P32462	438 aa	Known RBP	4.04	□□□□□ -1.76
UBP7	YIL156W	TCA17	P32613	152 aa		4.04	□□□□□ -1.76
UBP7	YIL156W	ILM1	P47155	203 aa		4.04	□□□□□ -1.76
UBP7	YIL156W	SWP1	Q02795	286 aa		4.04	□□□□□ -1.76
UBP7	YIL156W	YOL019W	Q08157	551 aa		4.04	□□□□□ -1.76
UBP7	YIL156W	YER078W-A	Q3E7A2	54 aa		4.04	□□□□□ -1.76
UBP7	YIL156W	SIR2	P06700	562 aa		4.03	□□□□□ -1.76
UBP7	YIL156W	SEC14	P24280	304 aa	Known RBP	4.03	□□□□□ -1.76
UBP7	YIL156W	AHC2	P25649	128 aa		4.03	□□□□□ -1.76
UBP7	YIL156W	RMI1	Q02685	241 aa		4.03	□□□□□ -1.76
UBP7	YIL156W	NDD1	Q08887	554 aa		4.03	□□□□□ -1.76
UBP7	YIL156W	MLP1	Q02455	1875 aa	Known RBP	4.03	□□□□□ -1.76
UBP7	YIL156W	EPT1	P22140	391 aa		4.03	□□□□□ -1.76
UBP7	YIL156W	ERG2	P32352	222 aa		4.03	□□□□□ -1.76
UBP7	YIL156W	DOG2	P38773	246 aa		4.03	□□□□□ -1.76
UBP7	YIL156W	TIM17	P39515	158 aa		4.03	□□□□□ -1.76
UBP7	YIL156W	YGR201C	P42936	225 aa		4.03	□□□□□ -1.76
UBP7	YIL156W	MRX11	Q03079	207 aa		4.03	□□□□□ -1.76
UBP7	YIL156W	SUE1	Q06524	206 aa		4.03	□□□□□ -1.76
UBP7	YIL156W	SNF4	P12904	322 aa		4.02	□□□□□ -1.77
UBP7	YIL156W	SSH1	P38353	490 aa	Known RBP	4.02	□□□□□ -1.77
UBP7	YIL156W	YHL044W	P38727	235 aa		4.02	□□□□□ -1.77
UBP7	YIL156W	BAT1	P38891	393 aa	Known RBP	4.02	□□□□□ -1.77
UBP7	YIL156W	GLE2	P40066	365 aa		4.02	□□□□□ -1.77
UBP7	YIL156W	YJR111C	P47148	283 aa	Known RBP	4.02	□□□□□ -1.77
UBP7	YIL156W	YMR244W	Q04018	355 aa		4.02	□□□□□ -1.77
UBP7	YIL156W	YDR115W	Q04598	105 aa		4.02	□□□□□ -1.77
UBP7	YIL156W	YKL068W-A	Q3E826	78 aa		4.02	□□□□□ -1.77
UBP7	YIL156W	SMP1	P38128	452 aa		4.02	□□□□□ -1.77
UBP7	YIL156W	PTH1	P38876	190 aa	Known RBP	4.02	□□□□□ -1.77
UBP7	YIL156W	RPL21A	Q02753	160 aa	Known RBP	4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms