RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C YDR286CQ05530 114 aa3.08□□□□□ -1.92
SSM4YIL030C Q0182Q9ZZW1 134 aa3.08□□□□□ -1.92
SSM4YIL030C CET1O13297 549 aaPredicted RBP3.07□□□□□ -1.92
SSM4YIL030C MBF1O14467 151 aaKnown RBP3.07□□□□□ -1.92
SSM4YIL030C YBR220CP38318 560 aa3.07□□□□□ -1.92
SSM4YIL030C ERJ5P43613 295 aaPredicted RBP3.07□□□□□ -1.92
SSM4YIL030C YJR056CP47115 236 aa3.07□□□□□ -1.92
SSM4YIL030C MOG1P47123 218 aa3.07□□□□□ -1.92
SSM4YIL030C MSY1P48527 492 aa3.07□□□□□ -1.92
SSM4YIL030C SRP1Q02821 542 aaKnown RBP3.07□□□□□ -1.92
SSM4YIL030C ELP4Q02884 456 aaKnown RBP3.07□□□□□ -1.92
SSM4YIL030C YOR292CQ08743 309 aa3.07□□□□□ -1.92
SSM4YIL030C MSW1P04803 379 aa3.07□□□□□ -1.92
SSM4YIL030C RNP1P32385 249 aa3.07□□□□□ -1.92
SSM4YIL030C PMT3P47190 753 aa3.07□□□□□ -1.92
SSM4YIL030C BXI1P48558 297 aa3.07□□□□□ -1.92
SSM4YIL030C MIX17Q03667 156 aa3.07□□□□□ -1.92
SSM4YIL030C MCH1Q07376 486 aa3.07□□□□□ -1.92
SSM4YIL030C RPL9AP05738 191 aaKnown RBP3.07□□□□□ -1.92
SSM4YIL030C PUP1P25043 261 aa3.07□□□□□ -1.92
SSM4YIL030C EGT2P42835 1041 aa3.07□□□□□ -1.92
SSM4YIL030C NIT3P49954 291 aa3.07□□□□□ -1.92
SSM4YIL030C RPL9BP51401 191 aaKnown RBP3.07□□□□□ -1.92
SSM4YIL030C LST7P53237 242 aa3.07□□□□□ -1.92
SSM4YIL030C GMC1Q04399 608 aa3.07□□□□□ -1.92
SSM4YIL030C SHH3Q04487 196 aa3.07□□□□□ -1.92
SSM4YIL030C YLR296WQ05898 108 aa3.07□□□□□ -1.92
SSM4YIL030C YDL242WQ07746 117 aa3.07□□□□□ -1.92
SSM4YIL030C YLR030WQ07967 263 aa3.07□□□□□ -1.92
SSM4YIL030C TAD3Q9URQ3 322 aa3.07□□□□□ -1.92
SSM4YIL030C RPL20AP0CX23 172 aaKnown RBP3.06□□□□□ -1.92
SSM4YIL030C RPL20BP0CX24 172 aaPredicted RBP3.06□□□□□ -1.92
SSM4YIL030C RNA15P25299 296 aaPredicted RBP3.06□□□□□ -1.92
SSM4YIL030C YUH1P35127 236 aa3.06□□□□□ -1.92
SSM4YIL030C FMC1P40491 155 aa3.06□□□□□ -1.92
SSM4YIL030C AVT4P50944 713 aa3.06□□□□□ -1.92
SSM4YIL030C SLX9P53251 210 aaPredicted RBP3.06□□□□□ -1.92
SSM4YIL030C ATP19P81451 68 aa3.06□□□□□ -1.92
SSM4YIL030C ENB1Q08299 606 aa3.06□□□□□ -1.92
SSM4YIL030C HNT3Q08702 217 aa3.06□□□□□ -1.92
SSM4YIL030C RPS22BQ3E7Y3 130 aaKnown RBP3.06□□□□□ -1.92
SSM4YIL030C YMR31P19955 123 aa3.06□□□□□ -1.92
SSM4YIL030C ERG4P25340 473 aa3.06□□□□□ -1.92
SSM4YIL030C RML2P32611 393 aa3.06□□□□□ -1.92
SSM4YIL030C YJL118WP47022 219 aa3.06□□□□□ -1.92
SSM4YIL030C YMR178WQ03219 274 aaKnown RBP3.06□□□□□ -1.92
SSM4YIL030C CSF1Q12150 2958 aa3.06□□□□□ -1.92
SSM4YIL030C RIP1P08067 215 aa3.06□□□□□ -1.92
SSM4YIL030C ARF2P19146 181 aaKnown RBP3.06□□□□□ -1.92
SSM4YIL030C YKL107WP34251 309 aa3.06□□□□□ -1.92
SSM4YIL030C UBX6P47049 396 aa3.06□□□□□ -1.92
SSM4YIL030C RPS12P48589 143 aaKnown RBP3.06□□□□□ -1.92
SSM4YIL030C RDI1Q12434 202 aa3.06□□□□□ -1.92
SSM4YIL030C AGC1Q12482 902 aa3.06□□□□□ -1.92
SSM4YIL030C ODC2Q99297 307 aa3.06□□□□□ -1.92
SSM4YIL030C GLT1Q12680 2145 aaKnown RBP3.05□□□□□ -1.92
SSM4YIL030C GAS1P22146 559 aaKnown RBP3.05□□□□□ -1.92
SSM4YIL030C CYB5P40312 120 aa3.05□□□□□ -1.92
SSM4YIL030C ARC18Q05933 178 aaKnown RBP3.05□□□□□ -1.92
SSM4YIL030C UBA3Q99344 299 aa3.05□□□□□ -1.92
SSM4YIL030C MES1P00958 751 aaKnown RBP3.05□□□□□ -1.92
SSM4YIL030C YCR101CP25607 182 aa3.05□□□□□ -1.92
SSM4YIL030C DEG1P31115 442 aaKnown RBP3.05□□□□□ -1.92
SSM4YIL030C CTK2P46962 323 aa3.05□□□□□ -1.92
SSM4YIL030C UFD1P53044 361 aa3.05□□□□□ -1.92
SSM4YIL030C YGR050CP53231 118 aa3.05□□□□□ -1.92
SSM4YIL030C TEX1P53851 422 aaKnown RBP3.05□□□□□ -1.92
SSM4YIL030C YMR166CQ03829 368 aa3.05□□□□□ -1.92
SSM4YIL030C MIM1Q08176 113 aa3.05□□□□□ -1.92
SSM4YIL030C NAG1Q8TGN9 163 aa3.05□□□□□ -1.92
SSM4YIL030C IRA2P19158 3079 aa3.05□□□□□ -1.92
SSM4YIL030C EMP70P32802 667 aa3.05□□□□□ -1.92
SSM4YIL030C SKN1P33336 771 aa3.05□□□□□ -1.92
SSM4YIL030C SPT23P35210 1082 aa3.05□□□□□ -1.92
SSM4YIL030C RPS20P38701 121 aaKnown RBP3.05□□□□□ -1.92
SSM4YIL030C FLO5P38894 1075 aa3.05□□□□□ -1.92
SSM4YIL030C YJL028WP47062 111 aa3.05□□□□□ -1.92
SSM4YIL030C NNF1P47149 201 aa3.05□□□□□ -1.92
SSM4YIL030C YJR120WP47157 116 aa3.05□□□□□ -1.92
SSM4YIL030C RIB4P50861 169 aaPredicted RBP3.05□□□□□ -1.92
SSM4YIL030C CRH1P53301 507 aa3.05□□□□□ -1.92
SSM4YIL030C RFU1Q08003 200 aa3.05□□□□□ -1.92
SSM4YIL030C DDI2P0CH63 225 aa3.04□□□□□ -1.92
SSM4YIL030C DDI3P0CH64 225 aa3.04□□□□□ -1.92
SSM4YIL030C RPB8P20436 146 aa3.04□□□□□ -1.92
SSM4YIL030C ERV1P27882 189 aa3.04□□□□□ -1.92
SSM4YIL030C YOX1P34161 385 aa3.04□□□□□ -1.92
SSM4YIL030C CFD1P40558 293 aa3.04□□□□□ -1.92
SSM4YIL030C YGR149WP48236 432 aa3.04□□□□□ -1.92
SSM4YIL030C YIP5P53108 310 aa3.04□□□□□ -1.92
SSM4YIL030C MRX8Q05473 314 aa3.04□□□□□ -1.92
SSM4YIL030C HTB1P02293 131 aaKnown RBP3.04□□□□□ -1.92
SSM4YIL030C HTB2P02294 131 aa3.04□□□□□ -1.92
SSM4YIL030C FRS1P15624 595 aaKnown RBP3.04□□□□□ -1.92
SSM4YIL030C ATP10P18496 279 aa3.04□□□□□ -1.92
SSM4YIL030C QCR9P22289 66 aa3.04□□□□□ -1.92
SSM4YIL030C ACP1P32463 125 aa3.04□□□□□ -1.92
SSM4YIL030C TTI2P47168 421 aa3.04□□□□□ -1.92
SSM4YIL030C COQ5P49017 307 aa3.04□□□□□ -1.92
SSM4YIL030C YGR042WP53227 271 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 66 ms