RNA–Protein interactions for RNA: YGR150C

CCM1, Transcript of Mitochondrial 15S rRNA-binding protein, yeast

Gene CCM1, Length 2,595 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCM1	YGR150C	PGA1	P53896	198 aa		2.75	□□□□□ -1.97
CCM1	YGR150C	PRR2	Q12310	699 aa		2.75	□□□□□ -1.97
CCM1	YGR150C	PDR18	P53756	1333 aa		2.74	□□□□□ -1.97
CCM1	YGR150C	RPL15A	P05748	204 aa	Known RBP	2.74	□□□□□ -1.97
CCM1	YGR150C	NMT1	P14743	455 aa		2.74	□□□□□ -1.97
CCM1	YGR150C	SPO13	P23624	291 aa		2.74	□□□□□ -1.97
CCM1	YGR150C	ERJ5	P43613	295 aa	Predicted RBP	2.74	□□□□□ -1.97
CCM1	YGR150C	MDM34	P53083	459 aa		2.74	□□□□□ -1.97
CCM1	YGR150C	YGR015C	P53208	328 aa		2.74	□□□□□ -1.97
CCM1	YGR150C	CLD1	P53264	445 aa		2.74	□□□□□ -1.97
CCM1	YGR150C	HHT1	P61830	136 aa		2.74	□□□□□ -1.97
CCM1	YGR150C	YOR376W	Q08900	122 aa		2.74	□□□□□ -1.97
CCM1	YGR150C	YOR342C	Q12182	319 aa		2.74	□□□□□ -1.97
CCM1	YGR150C	CRC1	Q12289	327 aa		2.74	□□□□□ -1.97
CCM1	YGR150C	RPB5	P20434	215 aa		2.74	□□□□□ -1.97
CCM1	YGR150C	MRPL24	P36525	258 aa	Predicted RBP	2.74	□□□□□ -1.97
CCM1	YGR150C	POP4	P38336	279 aa		2.74	□□□□□ -1.97
CCM1	YGR150C	MED6	P38782	295 aa		2.74	□□□□□ -1.97
CCM1	YGR150C	YNL208W	P40159	199 aa	Known RBP	2.74	□□□□□ -1.97
CCM1	YGR150C	PGD1	P40356	397 aa		2.74	□□□□□ -1.97
CCM1	YGR150C	PRM5	P40476	318 aa		2.74	□□□□□ -1.97
CCM1	YGR150C	RPR2	P40571	144 aa		2.74	□□□□□ -1.97
CCM1	YGR150C	BUD13	P46947	266 aa	Predicted RBP	2.74	□□□□□ -1.97
CCM1	YGR150C	BNS1	P50084	137 aa		2.74	□□□□□ -1.97
CCM1	YGR150C	ORM1	P53224	222 aa		2.74	□□□□□ -1.97
CCM1	YGR150C	MRX8	Q05473	314 aa		2.74	□□□□□ -1.97
CCM1	YGR150C	NKP2	Q06162	153 aa		2.74	□□□□□ -1.97
CCM1	YGR150C	FYV7	Q12247	151 aa		2.74	□□□□□ -1.97
CCM1	YGR150C	YPR011C	Q12251	326 aa		2.74	□□□□□ -1.97
CCM1	YGR150C	YIR021W-A	Q3E739	70 aa		2.74	□□□□□ -1.97
CCM1	YGR150C	YAL063C-A	Q3E791	96 aa		2.74	□□□□□ -1.97
CCM1	YGR150C	YER190C-B	P0CX94	160 aa		2.73	□□□□□ -1.97
CCM1	YGR150C	YEL077W-A	P0CX95	160 aa		2.73	□□□□□ -1.97
CCM1	YGR150C	YGR296C-B	P0CX96	160 aa		2.73	□□□□□ -1.97
CCM1	YGR150C	YPL283W-B	P0CX97	160 aa		2.73	□□□□□ -1.97
CCM1	YGR150C	YPR204C-A	P0CX98	160 aa		2.73	□□□□□ -1.97
CCM1	YGR150C	CPR1	P14832	162 aa	Known RBP	2.73	□□□□□ -1.97
CCM1	YGR150C	STP22	P25604	385 aa		2.73	□□□□□ -1.97
CCM1	YGR150C	MRP49	P32388	137 aa		2.73	□□□□□ -1.97
CCM1	YGR150C	SMP1	P38128	452 aa		2.73	□□□□□ -1.97
CCM1	YGR150C	OPY1	P38271	328 aa		2.73	□□□□□ -1.97
CCM1	YGR150C	YER186C	P40101	306 aa		2.73	□□□□□ -1.97
CCM1	YGR150C	YIL012W	P40551	113 aa		2.73	□□□□□ -1.97
CCM1	YGR150C	FMP48	P53233	369 aa		2.73	□□□□□ -1.97
CCM1	YGR150C	COF1	Q03048	143 aa	Known RBP	2.73	□□□□□ -1.97
CCM1	YGR150C	ERP1	Q05359	219 aa	Known RBP	2.73	□□□□□ -1.97
CCM1	YGR150C	SHE1	P38200	338 aa		2.73	□□□□□ -1.97
CCM1	YGR150C	CHS7	P38843	316 aa		2.73	□□□□□ -1.97
CCM1	YGR150C	VMA7	P39111	118 aa		2.73	□□□□□ -1.97
CCM1	YGR150C	RFC2	P40348	353 aa		2.73	□□□□□ -1.97
CCM1	YGR150C	YBL112C	Q3E7Y4	105 aa		2.73	□□□□□ -1.97
CCM1	YGR150C	CCH1	P50077	2039 aa		2.72	□□□□□ -1.97
CCM1	YGR150C	RPL30	P14120	105 aa	Known RBP	2.72	□□□□□ -1.97
CCM1	YGR150C	RNQ1	P25367	405 aa		2.72	□□□□□ -1.97
CCM1	YGR150C	BUD23	P25627	275 aa	Predicted RBP	2.72	□□□□□ -1.97
CCM1	YGR150C	RPC19	P28000	142 aa	Known RBP	2.72	□□□□□ -1.97
CCM1	YGR150C	CSH1	P38287	376 aa		2.72	□□□□□ -1.97
CCM1	YGR150C	RPS20	P38701	121 aa	Known RBP	2.72	□□□□□ -1.97
CCM1	YGR150C	YHI9	P38765	294 aa		2.72	□□□□□ -1.97
CCM1	YGR150C	FCY21	P40039	528 aa		2.72	□□□□□ -1.97
CCM1	YGR150C	YPL073C	P40323	161 aa		2.72	□□□□□ -1.97
CCM1	YGR150C	BOR1	P53838	576 aa		2.72	□□□□□ -1.97
CCM1	YGR150C	YDL180W	Q12301	547 aa		2.72	□□□□□ -1.97
CCM1	YGR150C	TSC3	Q3E790	80 aa		2.72	□□□□□ -1.97
CCM1	YGR150C	YFL068W	P0CX99	160 aa		2.72	□□□□□ -1.97
CCM1	YGR150C	YLL066W-A	P0CY00	160 aa		2.72	□□□□□ -1.97
CCM1	YGR150C	YLL067W-A	P0CY01	160 aa		2.72	□□□□□ -1.97
CCM1	YGR150C	BGL2	P15703	313 aa	Known RBP	2.72	□□□□□ -1.97
CCM1	YGR150C	PET9	P18239	318 aa	Known RBP	2.72	□□□□□ -1.97
CCM1	YGR150C	CKS1	P20486	150 aa	Known RBP	2.72	□□□□□ -1.97
CCM1	YGR150C	ERG2	P32352	222 aa		2.72	□□□□□ -1.97
CCM1	YGR150C	LHP1	P33399	275 aa	Known RBP	2.72	□□□□□ -1.97
CCM1	YGR150C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	2.72	□□□□□ -1.97	not detected
CCM1	YGR150C	MOH1	P38191	138 aa		2.72	□□□□□ -1.97
CCM1	YGR150C	PHO89	P38361	574 aa		2.72	□□□□□ -1.97
CCM1	YGR150C	IRC22	P40006	225 aa		2.72	□□□□□ -1.97
CCM1	YGR150C	ATG18	P43601	500 aa		2.72	□□□□□ -1.97
CCM1	YGR150C	OST2	P46964	130 aa		2.72	□□□□□ -1.97
CCM1	YGR150C	BIR1	P47134	954 aa		2.72	□□□□□ -1.97
CCM1	YGR150C	CRH1	P53301	507 aa		2.72	□□□□□ -1.97
CCM1	YGR150C	ACT1	P60010	375 aa	Known RBP	2.72	□□□□□ -1.97
CCM1	YGR150C	APS2	Q00381	147 aa		2.72	□□□□□ -1.97
CCM1	YGR150C	THI74	Q04083	370 aa		2.72	□□□□□ -1.97
CCM1	YGR150C	CNL1	Q06333	122 aa		2.72	□□□□□ -1.97
CCM1	YGR150C	YPR014C	Q6B0W2	109 aa		2.72	□□□□□ -1.97
CCM1	YGR150C	TDA8	Q6B2U8	126 aa		2.72	□□□□□ -1.97
CCM1	YGR150C	ADH1	P00330	348 aa	Known RBP	2.71	□□□□□ -1.98
CCM1	YGR150C	RSA4	P25382	515 aa	Known RBP	2.71	□□□□□ -1.98
CCM1	YGR150C	LDB16	P25587	256 aa		2.71	□□□□□ -1.98
CCM1	YGR150C	SFC1	P33303	322 aa		2.71	□□□□□ -1.98
CCM1	YGR150C	DLS1	P40366	167 aa		2.71	□□□□□ -1.98
CCM1	YGR150C	STB1	P42845	420 aa		2.71	□□□□□ -1.98
CCM1	YGR150C	FMP42	Q04991	504 aa		2.71	□□□□□ -1.98
CCM1	YGR150C	GEP5	Q12393	293 aa		2.71	□□□□□ -1.98
CCM1	YGR150C	NAG1	Q8TGN9	163 aa		2.71	□□□□□ -1.98
CCM1	YGR150C	RPS8A	P0CX39	200 aa	Known RBP	2.71	□□□□□ -1.98
CCM1	YGR150C	RPS8B	P0CX40	200 aa	Known RBP	2.71	□□□□□ -1.98
CCM1	YGR150C	TIM17	P39515	158 aa		2.71	□□□□□ -1.98
CCM1	YGR150C	AST2	P39945	430 aa	Known RBP	2.71	□□□□□ -1.98
CCM1	YGR150C	YER189W	P40104	122 aa		2.71	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms