RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C CGR1P53188 120 aa1.78□□□□□ -2.12
VAB2YEL005C YMR226CQ05016 267 aaKnown RBP1.78□□□□□ -2.12
VAB2YEL005C PSF1Q12488 208 aa1.78□□□□□ -2.12
VAB2YEL005C YIL177CP40434 1758 aa1.77□□□□□ -2.13
VAB2YEL005C YJL225CP40889 1758 aa1.77□□□□□ -2.13
VAB2YEL005C YKT6P36015 200 aaKnown RBP1.77□□□□□ -2.13
VAB2YEL005C YHR180WP38868 163 aa1.77□□□□□ -2.13
VAB2YEL005C IRC22P40006 225 aa1.77□□□□□ -2.13
VAB2YEL005C LSM4P40070 187 aaKnown RBP1.77□□□□□ -2.13
VAB2YEL005C AYR1P40471 297 aa1.77□□□□□ -2.13
VAB2YEL005C TDA8Q6B2U8 126 aa1.77□□□□□ -2.13
VAB2YEL005C YHR139C-AO13536 103 aa1.76□□□□□ -2.13
VAB2YEL005C PET9P18239 318 aaKnown RBP1.76□□□□□ -2.13
VAB2YEL005C MDH2P22133 377 aa1.76□□□□□ -2.13
VAB2YEL005C CWC23P52868 283 aaPredicted RBP1.76□□□□□ -2.13
VAB2YEL005C YNR062CP53748 327 aa1.76□□□□□ -2.13
VAB2YEL005C GAS3Q03655 524 aa1.76□□□□□ -2.13
VAB2YEL005C GIS3Q12418 502 aa1.76□□□□□ -2.13
VAB2YEL005C TSC3Q3E790 80 aa1.76□□□□□ -2.13
VAB2YEL005C REP2P03872 296 aa1.75□□□□□ -2.13
VAB2YEL005C ARG80P07249 177 aa1.75□□□□□ -2.13
VAB2YEL005C YLR156WP0CE96 114 aa1.75□□□□□ -2.13
VAB2YEL005C YLR159WP0CE97 114 aa1.75□□□□□ -2.13
VAB2YEL005C YLR161WP0CE98 114 aa1.75□□□□□ -2.13
VAB2YEL005C GCN3P14741 305 aa1.75□□□□□ -2.13
VAB2YEL005C MEI4P29467 408 aa1.75□□□□□ -2.13
VAB2YEL005C TCA17P32613 152 aa1.75□□□□□ -2.13
VAB2YEL005C TRM5P38793 499 aa1.75□□□□□ -2.13
VAB2YEL005C SVP26P38869 228 aa1.75□□□□□ -2.13
VAB2YEL005C IKI1P38874 309 aa1.75□□□□□ -2.13
VAB2YEL005C ICE2P40499 491 aa1.75□□□□□ -2.13
VAB2YEL005C AGE2P40529 298 aa1.75□□□□□ -2.13
VAB2YEL005C TIR3P40552 269 aa1.75□□□□□ -2.13
VAB2YEL005C PDR17P53844 350 aa1.75□□□□□ -2.13
VAB2YEL005C MDM32Q12171 622 aa1.75□□□□□ -2.13
VAB2YEL005C MET5P47169 1442 aa1.74□□□□□ -2.13
VAB2YEL005C RAS2P01120 322 aaKnown RBP1.74□□□□□ -2.13
VAB2YEL005C RPL25P04456 142 aaKnown RBP1.74□□□□□ -2.13
VAB2YEL005C SIP3P38717 1229 aa1.74□□□□□ -2.13
VAB2YEL005C RFC4P40339 323 aaKnown RBP1.74□□□□□ -2.13
VAB2YEL005C MRPS17Q03246 237 aaPredicted RBP1.74□□□□□ -2.13
VAB2YEL005C TRM12Q04235 462 aa1.74□□□□□ -2.13
VAB2YEL005C YRA1Q12159 226 aaKnown RBP1.74□□□□□ -2.13
VAB2YEL005C ADF1Q2V2Q1 113 aa1.74□□□□□ -2.13
VAB2YEL005C YDR157WA0A023PZE8 133 aa1.73□□□□□ -2.13
VAB2YEL005C SEC4P07560 215 aaKnown RBP1.73□□□□□ -2.13
VAB2YEL005C MAG1P22134 296 aaKnown RBP1.73□□□□□ -2.13
VAB2YEL005C PTM1P32857 523 aa1.73□□□□□ -2.13
VAB2YEL005C YET1P35723 206 aa1.73□□□□□ -2.13
VAB2YEL005C YCR087C-AP37263 153 aa1.73□□□□□ -2.13
VAB2YEL005C CUS2P53830 285 aaPredicted RBP1.73□□□□□ -2.13
VAB2YEL005C BUD25P85052 153 aa1.73□□□□□ -2.13
VAB2YEL005C JIP3O13555 125 aa1.72□□□□□ -2.13
VAB2YEL005C HTB1P02293 131 aaKnown RBP1.72□□□□□ -2.13
VAB2YEL005C HTB2P02294 131 aa1.72□□□□□ -2.13
VAB2YEL005C CDC36P06100 191 aaPredicted RBP1.72□□□□□ -2.13
VAB2YEL005C CDC7P06243 507 aa1.72□□□□□ -2.13
VAB2YEL005C DDI2P0CH63 225 aa1.72□□□□□ -2.13
VAB2YEL005C DDI3P0CH64 225 aa1.72□□□□□ -2.13
VAB2YEL005C SNC2P33328 115 aa1.72□□□□□ -2.13
VAB2YEL005C TAF14P35189 244 aa1.72□□□□□ -2.13
VAB2YEL005C YNL217WP40152 326 aa1.72□□□□□ -2.13
VAB2YEL005C SWP1Q02795 286 aa1.72□□□□□ -2.13
VAB2YEL005C SPG3Q04398 127 aaPredicted RBP1.72□□□□□ -2.13
VAB2YEL005C YPL162CQ12042 273 aa1.72□□□□□ -2.13
VAB2YEL005C GET4Q12125 312 aa1.72□□□□□ -2.13
VAB2YEL005C TUS1Q06412 1307 aa1.71□□□□□ -2.14
VAB2YEL005C URA5P13298 226 aaKnown RBP1.71□□□□□ -2.14
VAB2YEL005C KSS1P14681 368 aa1.71□□□□□ -2.14
VAB2YEL005C BET1P22804 142 aa1.71□□□□□ -2.14
VAB2YEL005C UMP1P38293 148 aa1.71□□□□□ -2.14
VAB2YEL005C EAF6P47128 113 aa1.71□□□□□ -2.14
VAB2YEL005C GET1P53192 235 aa1.71□□□□□ -2.14
VAB2YEL005C LSM7P53905 115 aaKnown RBP1.71□□□□□ -2.14
VAB2YEL005C SML1Q04964 104 aa1.71□□□□□ -2.14
VAB2YEL005C ABP140Q08641 628 aaKnown RBP1.71□□□□□ -2.14
VAB2YEL005C YHR214C-EQ8TGK0 99 aa1.71□□□□□ -2.14
VAB2YEL005C RPL27BP0C2H7 136 aaKnown RBP1.7□□□□□ -2.14
VAB2YEL005C RFA3P26755 122 aaKnown RBP1.7□□□□□ -2.14
VAB2YEL005C SPS18P32572 300 aa1.7□□□□□ -2.14
VAB2YEL005C SEC17P32602 292 aa1.7□□□□□ -2.14
VAB2YEL005C AVT2P39981 480 aa1.7□□□□□ -2.14
VAB2YEL005C YRB2P40517 327 aa1.7□□□□□ -2.14
VAB2YEL005C DOC1P53068 250 aa1.7□□□□□ -2.14
VAB2YEL005C YGR050CP53231 118 aa1.7□□□□□ -2.14
VAB2YEL005C SAY1P53324 424 aa1.7□□□□□ -2.14
VAB2YEL005C COG5P53951 403 aa1.7□□□□□ -2.14
VAB2YEL005C FLO9P39712 1322 aa1.69□□□□□ -2.14
VAB2YEL005C TIM9O74700 87 aa1.69□□□□□ -2.14
VAB2YEL005C YOL162WP0CF19 215 aa1.69□□□□□ -2.14
VAB2YEL005C MER1P16523 270 aa1.69□□□□□ -2.14
VAB2YEL005C CBF1P17106 351 aa1.69□□□□□ -2.14
VAB2YEL005C FZF1P32805 299 aa1.69□□□□□ -2.14
VAB2YEL005C MRPL17P36528 281 aa1.69□□□□□ -2.14
VAB2YEL005C YBR219CP38317 127 aa1.69□□□□□ -2.14
VAB2YEL005C HMF1P40037 129 aaKnown RBP1.69□□□□□ -2.14
VAB2YEL005C GVP36P40531 326 aaKnown RBP1.69□□□□□ -2.14
VAB2YEL005C BOL2P53082 120 aa1.69□□□□□ -2.14
VAB2YEL005C YDR249CQ03787 373 aa1.69□□□□□ -2.14
VAB2YEL005C RPL27AP0C2H6 136 aaKnown RBP1.68□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 178 ms