RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC20	YDR498C	YCT1	Q12235	531 aa		4.87	□□□□□ -1.63
SEC20	YDR498C	RNH203	Q12338	110 aa		4.87	□□□□□ -1.63
SEC20	YDR498C	MED4	Q12343	284 aa		4.87	□□□□□ -1.63
SEC20	YDR498C	COA2	Q3E823	68 aa		4.87	□□□□□ -1.63
SEC20	YDR498C	Q0142	Q9ZZW4	58 aa		4.87	□□□□□ -1.63
SEC20	YDR498C	TOR1	P35169	2470 aa		4.86	□□□□□ -1.63
SEC20	YDR498C	RPL7A	P05737	244 aa	Known RBP	4.86	□□□□□ -1.63
SEC20	YDR498C	RPI1	P23250	407 aa	Known RBP	4.86	□□□□□ -1.63
SEC20	YDR498C	CNB1	P25296	175 aa		4.86	□□□□□ -1.63
SEC20	YDR498C	YCR025C	P25352	136 aa		4.86	□□□□□ -1.63
SEC20	YDR498C	LSM12	P38828	187 aa	Known RBP	4.86	□□□□□ -1.63
SEC20	YDR498C	GPI16	P38875	610 aa		4.86	□□□□□ -1.63
SEC20	YDR498C	YEA6	P39953	335 aa		4.86	□□□□□ -1.63
SEC20	YDR498C	CCS1	P40202	249 aa	Known RBP	4.86	□□□□□ -1.63
SEC20	YDR498C	YIL029C	P40538	142 aa		4.86	□□□□□ -1.63
SEC20	YDR498C	EGT2	P42835	1041 aa		4.86	□□□□□ -1.63
SEC20	YDR498C	ACT1	P60010	375 aa	Known RBP	4.86	□□□□□ -1.63
SEC20	YDR498C	YDR286C	Q05530	114 aa		4.86	□□□□□ -1.63
SEC20	YDR498C	RPL7B	Q12213	244 aa	Known RBP	4.86	□□□□□ -1.63
SEC20	YDR498C	VAM3	Q12241	283 aa		4.86	□□□□□ -1.63
SEC20	YDR498C	YLR122C	Q12312	125 aa		4.86	□□□□□ -1.63
SEC20	YDR498C	PRM4	Q12498	284 aa		4.86	□□□□□ -1.63
SEC20	YDR498C	YBR255C-A	Q3E776	120 aa		4.86	□□□□□ -1.63
SEC20	YDR498C	VMA9	Q3E7B6	73 aa		4.86	□□□□□ -1.63
SEC20	YDR498C	MET3	P08536	511 aa		4.85	□□□□□ -1.63
SEC20	YDR498C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.85	□□□□□ -1.63
SEC20	YDR498C	TY1A-DR6	P0CX70	440 aa		4.85	□□□□□ -1.63
SEC20	YDR498C	TY1A-ER1	P0CX71	440 aa		4.85	□□□□□ -1.63
SEC20	YDR498C	TY1A-LR2	P0CX72	440 aa		4.85	□□□□□ -1.63
SEC20	YDR498C	TY1A-PL	P0CX73	440 aa		4.85	□□□□□ -1.63
SEC20	YDR498C	TY1A-JR1	P0CX74	440 aa		4.85	□□□□□ -1.63
SEC20	YDR498C	TY1A-LR3	P0CX75	440 aa		4.85	□□□□□ -1.63
SEC20	YDR498C	TY1A-ML2	P0CX76	440 aa		4.85	□□□□□ -1.63
SEC20	YDR498C	YOX1	P34161	385 aa		4.85	□□□□□ -1.63
SEC20	YDR498C	YHL037C	P38733	133 aa		4.85	□□□□□ -1.63
SEC20	YDR498C	SEN34	P39707	275 aa		4.85	□□□□□ -1.63
SEC20	YDR498C	PIG2	P40187	538 aa		4.85	□□□□□ -1.63
SEC20	YDR498C	XBP1	P40489	647 aa		4.85	□□□□□ -1.63
SEC20	YDR498C	RPA34	P47006	233 aa	Predicted RBP	4.85	□□□□□ -1.63
SEC20	YDR498C	MRX5	P47007	382 aa		4.85	□□□□□ -1.63
SEC20	YDR498C	HNT2	P49775	206 aa		4.85	□□□□□ -1.63
SEC20	YDR498C	SIP18	P50263	79 aa		4.85	□□□□□ -1.63
SEC20	YDR498C	YIF1	P53845	314 aa	Known RBP	4.85	□□□□□ -1.63
SEC20	YDR498C	ERV25	P54837	211 aa	Known RBP	4.85	□□□□□ -1.63
SEC20	YDR498C	ERP1	Q05359	219 aa	Known RBP	4.85	□□□□□ -1.63
SEC20	YDR498C	YPR098C	Q06089	161 aa		4.85	□□□□□ -1.63
SEC20	YDR498C	YOL024W	Q08172	172 aa		4.85	□□□□□ -1.63
SEC20	YDR498C	TY1A-GR1	Q12085	440 aa		4.85	□□□□□ -1.63
SEC20	YDR498C	PRS5	Q12265	496 aa	Known RBP	4.85	□□□□□ -1.63
SEC20	YDR498C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.85	□□□□□ -1.63
SEC20	YDR498C	TY1A-OL	Q92392	440 aa	Known RBP	4.85	□□□□□ -1.63
SEC20	YDR498C	RPL25	P04456	142 aa	Known RBP	4.84	□□□□□ -1.63
SEC20	YDR498C	UBI4	P0CG63	381 aa	Known RBP	4.84	□□□□□ -1.63
SEC20	YDR498C	CKA1	P15790	372 aa		4.84	□□□□□ -1.63
SEC20	YDR498C	MAK32	P23060	363 aa		4.84	□□□□□ -1.63
SEC20	YDR498C	SIP1	P32578	815 aa		4.84	□□□□□ -1.63
SEC20	YDR498C	PAC2	P39937	518 aa		4.84	□□□□□ -1.63
SEC20	YDR498C	GON7	P46984	123 aa		4.84	□□□□□ -1.63
SEC20	YDR498C	YJR012C	P47087	207 aa		4.84	□□□□□ -1.63
SEC20	YDR498C	SNN1	P48232	102 aa		4.84	□□□□□ -1.63
SEC20	YDR498C	BUL1	P48524	976 aa		4.84	□□□□□ -1.63
SEC20	YDR498C	GNP1	P48813	663 aa		4.84	□□□□□ -1.63
SEC20	YDR498C	SOL1	P50278	321 aa		4.84	□□□□□ -1.63
SEC20	YDR498C	SLX9	P53251	210 aa	Predicted RBP	4.84	□□□□□ -1.63
SEC20	YDR498C	FMP41	P53889	259 aa	Known RBP	4.84	□□□□□ -1.63
SEC20	YDR498C	YMR082C	Q04276	118 aa		4.84	□□□□□ -1.63
SEC20	YDR498C	PIN3	Q06449	215 aa		4.84	□□□□□ -1.63
SEC20	YDR498C	MRL1	Q06815	381 aa		4.84	□□□□□ -1.63
SEC20	YDR498C	YOR029W	Q12243	111 aa		4.84	□□□□□ -1.63
SEC20	YDR498C	ATG5	Q12380	294 aa		4.84	□□□□□ -1.63
SEC20	YDR498C	YLR146W-A	Q2V2P1	62 aa		4.84	□□□□□ -1.63
SEC20	YDR498C	YHR213W-A	Q8TGT4	77 aa		4.84	□□□□□ -1.63
SEC20	YDR498C	MEC1	P38111	2368 aa		4.84	□□□□□ -1.64
SEC20	YDR498C	OLE1	P21147	510 aa	Known RBP	4.83	□□□□□ -1.64
SEC20	YDR498C	CLB6	P32943	380 aa		4.83	□□□□□ -1.64
SEC20	YDR498C	CUE1	P38428	203 aa		4.83	□□□□□ -1.64
SEC20	YDR498C	PRS2	P38620	318 aa	Known RBP	4.83	□□□□□ -1.64
SEC20	YDR498C	LAG1	P38703	411 aa		4.83	□□□□□ -1.64
SEC20	YDR498C	LNP1	P38878	278 aa		4.83	□□□□□ -1.64
SEC20	YDR498C	RMD6	P39975	231 aa		4.83	□□□□□ -1.64
SEC20	YDR498C	SWM2	P40342	146 aa		4.83	□□□□□ -1.64
SEC20	YDR498C	PRM5	P40476	318 aa		4.83	□□□□□ -1.64
SEC20	YDR498C	YIL024C	P40543	189 aa		4.83	□□□□□ -1.64
SEC20	YDR498C	IRC24	P40580	263 aa		4.83	□□□□□ -1.64
SEC20	YDR498C	TAF4	P50105	388 aa		4.83	□□□□□ -1.64
SEC20	YDR498C	MSO1	P53604	210 aa	Known RBP	4.83	□□□□□ -1.64
SEC20	YDR498C	GPI15	P53961	229 aa		4.83	□□□□□ -1.64
SEC20	YDR498C	YDC1	Q02896	317 aa		4.83	□□□□□ -1.64
SEC20	YDR498C	YML108W	Q03759	105 aa		4.83	□□□□□ -1.64
SEC20	YDR498C	FIT1	Q04433	528 aa		4.83	□□□□□ -1.64
SEC20	YDR498C	YDL218W	Q07629	317 aa		4.83	□□□□□ -1.64
SEC20	YDR498C	YOR292C	Q08743	309 aa		4.83	□□□□□ -1.64
SEC20	YDR498C	SWT1	Q12104	458 aa		4.83	□□□□□ -1.64
SEC20	YDR498C	ISN1	Q99312	450 aa		4.83	□□□□□ -1.64
SEC20	YDR498C	YCR101C	P25607	182 aa		4.82	□□□□□ -1.64
SEC20	YDR498C	YKL162C	P36052	402 aa		4.82	□□□□□ -1.64
SEC20	YDR498C	YFL015C	P43578	164 aa		4.82	□□□□□ -1.64
SEC20	YDR498C	MCM22	P47167	239 aa		4.82	□□□□□ -1.64
SEC20	YDR498C	CWC25	P53854	179 aa	Known RBP	4.82	□□□□□ -1.64
SEC20	YDR498C	SNO1	Q03144	224 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms