RNA–Protein interactions for RNA: YDR330W

UBX5, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX5, Length 1,503 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX5YDR330W YER078W-AQ3E7A2 54 aa3.26□□□□□ -1.89
UBX5YDR330W UBA3Q99344 299 aa3.26□□□□□ -1.89
UBX5YDR330W YSF3P0C074 85 aaPredicted RBP3.25□□□□□ -1.89
UBX5YDR330W CWP1P28319 239 aa3.25□□□□□ -1.89
UBX5YDR330W MSN4P33749 630 aa3.25□□□□□ -1.89
UBX5YDR330W YBL059WP34224 193 aa3.25□□□□□ -1.89
UBX5YDR330W SFK1P35735 353 aa3.25□□□□□ -1.89
UBX5YDR330W MRPL15P36523 253 aa3.25□□□□□ -1.89
UBX5YDR330W NSG1P38837 291 aa3.25□□□□□ -1.89
UBX5YDR330W YNL208WP40159 199 aaKnown RBP3.25□□□□□ -1.89
UBX5YDR330W SEH1P53011 349 aaKnown RBP3.25□□□□□ -1.89
UBX5YDR330W YGL204CP53089 101 aa3.25□□□□□ -1.89
UBX5YDR330W NMA1Q06178 401 aaKnown RBP3.25□□□□□ -1.89
UBX5YDR330W MCP1Q12106 302 aa3.25□□□□□ -1.89
UBX5YDR330W HMS1Q12398 434 aa3.25□□□□□ -1.89
UBX5YDR330W BEM2P39960 2167 aaKnown RBP3.25□□□□□ -1.89
UBX5YDR330W ADK1P07170 222 aaKnown RBP3.24□□□□□ -1.89
UBX5YDR330W NHP6BP11633 99 aaKnown RBP3.24□□□□□ -1.89
UBX5YDR330W MEK1P24719 497 aaPredicted RBP3.24□□□□□ -1.89
UBX5YDR330W DEG1P31115 442 aaKnown RBP3.24□□□□□ -1.89
UBX5YDR330W ERG24P32462 438 aaKnown RBP3.24□□□□□ -1.89
UBX5YDR330W MRPL3P36516 390 aa3.24□□□□□ -1.89
UBX5YDR330W AVT5P38176 459 aa3.24□□□□□ -1.89
UBX5YDR330W PET100P38958 111 aa3.24□□□□□ -1.89
UBX5YDR330W DFG10P40526 253 aa3.24□□□□□ -1.89
UBX5YDR330W COX16P47081 118 aa3.24□□□□□ -1.89
UBX5YDR330W AIM25P47140 327 aa3.24□□□□□ -1.89
UBX5YDR330W YJR141WP47172 347 aaPredicted RBP3.24□□□□□ -1.89
UBX5YDR330W CCC1P47818 322 aa3.24□□□□□ -1.89
UBX5YDR330W TRM9P49957 279 aa3.24□□□□□ -1.89
UBX5YDR330W YGR266WP53326 701 aa3.24□□□□□ -1.89
UBX5YDR330W YLR460CP54007 376 aa3.24□□□□□ -1.89
UBX5YDR330W PAL1Q05518 499 aaKnown RBP3.24□□□□□ -1.89
UBX5YDR330W YLR283WQ05867 314 aa3.24□□□□□ -1.89
UBX5YDR330W PEX30Q06169 523 aa3.24□□□□□ -1.89
UBX5YDR330W KEI1Q06346 221 aa3.24□□□□□ -1.89
UBX5YDR330W COQ10Q08058 207 aa3.24□□□□□ -1.89
UBX5YDR330W HRT1Q08273 121 aa3.24□□□□□ -1.89
UBX5YDR330W BSC6Q08280 497 aa3.24□□□□□ -1.89
UBX5YDR330W BTS1Q12051 335 aa3.24□□□□□ -1.89
UBX5YDR330W BBP1Q12365 385 aa3.24□□□□□ -1.89
UBX5YDR330W MSI1P13712 422 aa3.24□□□□□ -1.89
UBX5YDR330W YKL063CP35725 167 aa3.24□□□□□ -1.89
UBX5YDR330W YKL162CP36052 402 aa3.24□□□□□ -1.89
UBX5YDR330W UTH1P36135 365 aa3.24□□□□□ -1.89
UBX5YDR330W SDS24P38314 527 aa3.24□□□□□ -1.89
UBX5YDR330W YER184CP39961 794 aa3.24□□□□□ -1.89
UBX5YDR330W CAT5P41735 233 aa3.24□□□□□ -1.89
UBX5YDR330W YGR210CP42942 411 aa3.24□□□□□ -1.89
UBX5YDR330W YFR054CP43622 192 aa3.24□□□□□ -1.89
UBX5YDR330W YJR085CP47131 105 aaKnown RBP3.24□□□□□ -1.89
UBX5YDR330W YGL260WP53056 76 aa3.24□□□□□ -1.89
UBX5YDR330W MST27P53176 234 aa3.24□□□□□ -1.89
UBX5YDR330W ASI3P53983 676 aa3.24□□□□□ -1.89
UBX5YDR330W COX20Q04935 205 aa3.24□□□□□ -1.89
UBX5YDR330W YNG1Q08465 219 aa3.24□□□□□ -1.89
UBX5YDR330W TMS1Q12116 473 aa3.24□□□□□ -1.89
UBX5YDR330W ERV2Q12284 196 aa3.24□□□□□ -1.89
UBX5YDR330W HEM4P06174 275 aa3.23□□□□□ -1.89
UBX5YDR330W ARO2P28777 376 aaKnown RBP3.23□□□□□ -1.89
UBX5YDR330W PMT2P31382 759 aa3.23□□□□□ -1.89
UBX5YDR330W TAF14P35189 244 aa3.23□□□□□ -1.89
UBX5YDR330W YHR180WP38868 163 aa3.23□□□□□ -1.89
UBX5YDR330W SMB1P40018 196 aaKnown RBP3.23□□□□□ -1.89
UBX5YDR330W YCH1P42937 148 aa3.23□□□□□ -1.89
UBX5YDR330W YFR057WP43625 151 aa3.23□□□□□ -1.89
UBX5YDR330W SNX4P47057 423 aa3.23□□□□□ -1.89
UBX5YDR330W VHT1P53241 593 aa3.23□□□□□ -1.89
UBX5YDR330W HCH1P53834 153 aa3.23□□□□□ -1.89
UBX5YDR330W ATC1Q04005 294 aa3.23□□□□□ -1.89
UBX5YDR330W UTP15Q04305 513 aaKnown RBP3.23□□□□□ -1.89
UBX5YDR330W HRI1Q05905 244 aaKnown RBP3.23□□□□□ -1.89
UBX5YDR330W DCR2Q05924 578 aa3.23□□□□□ -1.89
UBX5YDR330W GAS2Q06135 555 aa3.23□□□□□ -1.89
UBX5YDR330W JID1Q12350 301 aa3.23□□□□□ -1.89
UBX5YDR330W RTR2Q12378 196 aa3.23□□□□□ -1.89
UBX5YDR330W YOR343CQ12484 108 aa3.23□□□□□ -1.89
UBX5YDR330W FMP16Q12497 93 aa3.23□□□□□ -1.89
UBX5YDR330W RPS8AP0CX39 200 aaKnown RBP3.22□□□□□ -1.89
UBX5YDR330W RPS8BP0CX40 200 aaKnown RBP3.22□□□□□ -1.89
UBX5YDR330W CKS1P20486 150 aaKnown RBP3.22□□□□□ -1.89
UBX5YDR330W HSP150P32478 413 aa3.22□□□□□ -1.89
UBX5YDR330W SRP102P36057 244 aaPredicted RBP3.22□□□□□ -1.89
UBX5YDR330W VMA7P39111 118 aa3.22□□□□□ -1.89
UBX5YDR330W YER137CP40083 148 aaKnown RBP3.22□□□□□ -1.89
UBX5YDR330W RFC4P40339 323 aaKnown RBP3.22□□□□□ -1.89
UBX5YDR330W REE1P40893 198 aa3.22□□□□□ -1.89
UBX5YDR330W CIN2P46670 268 aa3.22□□□□□ -1.89
UBX5YDR330W BRR6P53062 197 aa3.22□□□□□ -1.89
UBX5YDR330W FMP48P53233 369 aa3.22□□□□□ -1.89
UBX5YDR330W OKP1P53298 406 aa3.22□□□□□ -1.89
UBX5YDR330W SCS7Q03529 384 aa3.22□□□□□ -1.89
UBX5YDR330W SNX41Q04053 625 aa3.22□□□□□ -1.89
UBX5YDR330W BNA7Q04066 261 aa3.22□□□□□ -1.89
UBX5YDR330W MRX8Q05473 314 aa3.22□□□□□ -1.89
UBX5YDR330W SEI1Q06058 285 aa3.22□□□□□ -1.89
UBX5YDR330W IRC25Q07951 179 aa3.22□□□□□ -1.89
UBX5YDR330W PRP46Q12417 451 aaPredicted RBP3.22□□□□□ -1.89
UBX5YDR330W RDI1Q12434 202 aa3.22□□□□□ -1.89
UBX5YDR330W YOS9Q99220 542 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms