RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeastyeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTP1YDL230W YCL001W-AP87012 153 aa10.57□□□□□ -0.72
PTP1YDL230W FIT3Q08907 204 aa10.57□□□□□ -0.72
PTP1YDL230W IPP1P00817 287 aaKnown RBP10.56□□□□□ -0.72
PTP1YDL230W MRP2P10663 115 aaPredicted RBP10.56□□□□□ -0.72
PTP1YDL230W RPB10P22139 70 aa10.56□□□□□ -0.72
PTP1YDL230W ERV15P38312 142 aa10.56□□□□□ -0.72
PTP1YDL230W QRI1P43123 477 aaKnown RBP10.56□□□□□ -0.72
PTP1YDL230W SNO1Q03144 224 aa10.56□□□□□ -0.72
PTP1YDL230W YMR279CQ03263 540 aa10.56□□□□□ -0.72
PTP1YDL230W YDR415CQ04033 374 aaPredicted RBP10.56□□□□□ -0.72
PTP1YDL230W YDR391CQ04170 232 aa10.56□□□□□ -0.72
PTP1YDL230W COA2Q3E823 68 aa10.56□□□□□ -0.72
PTP1YDL230W RPL7AP05737 244 aaKnown RBP10.55□□□□□ -0.72
PTP1YDL230W GDH1P07262 454 aaKnown RBP10.55□□□□□ -0.72
PTP1YDL230W TY1A-LR4P0C2I8 440 aaKnown RBP10.55□□□□□ -0.72
PTP1YDL230W TY1A-DR6P0CX70 440 aa10.55□□□□□ -0.72
PTP1YDL230W TY1A-ER1P0CX71 440 aa10.55□□□□□ -0.72
PTP1YDL230W TY1A-LR2P0CX72 440 aa10.55□□□□□ -0.72
PTP1YDL230W TY1A-PLP0CX73 440 aa10.55□□□□□ -0.72
PTP1YDL230W TY1A-JR1P0CX74 440 aa10.55□□□□□ -0.72
PTP1YDL230W TY1A-LR3P0CX75 440 aa10.55□□□□□ -0.72
PTP1YDL230W TY1A-ML2P0CX76 440 aa10.55□□□□□ -0.72
PTP1YDL230W YKL162CP36052 402 aa10.55□□□□□ -0.72
PTP1YDL230W PRS2P38620 318 aaKnown RBP10.55□□□□□ -0.72
PTP1YDL230W YEA4P40004 342 aa10.55□□□□□ -0.72
PTP1YDL230W MRX5P47007 382 aa10.55□□□□□ -0.72
PTP1YDL230W ADD37Q03233 198 aa10.55□□□□□ -0.72
PTP1YDL230W PIN3Q06449 215 aa10.55□□□□□ -0.72
PTP1YDL230W RAF1Q06891 181 aa10.55□□□□□ -0.72
PTP1YDL230W SDO1Q07953 250 aaKnown RBP10.55□□□□□ -0.72
PTP1YDL230W RRS1Q08746 203 aaKnown RBP10.55□□□□□ -0.72
PTP1YDL230W TY1A-GR1Q12085 440 aa10.55□□□□□ -0.72
PTP1YDL230W RPL7BQ12213 244 aaKnown RBP10.55□□□□□ -0.72
PTP1YDL230W TY1A-PR3Q6Q5H1 440 aaKnown RBP10.55□□□□□ -0.72
PTP1YDL230W TY1A-OLQ92392 440 aaKnown RBP10.55□□□□□ -0.72
PTP1YDL230W SEC62P21825 274 aa10.54□□□□□ -0.72
PTP1YDL230W MRPL22P53881 309 aa10.54□□□□□ -0.72
PTP1YDL230W YPR098CQ06089 161 aa10.54□□□□□ -0.72
PTP1YDL230W RNH203Q12338 110 aa10.54□□□□□ -0.72
PTP1YDL230W TDH1P00360 332 aaKnown RBP10.53□□□□□ -0.72
PTP1YDL230W YML003WP0CF16 290 aa10.53□□□□□ -0.72
PTP1YDL230W MSO1P53604 210 aaKnown RBP10.53□□□□□ -0.72
PTP1YDL230W MRPS17Q03246 237 aaPredicted RBP10.53□□□□□ -0.72
PTP1YDL230W YMR082CQ04276 118 aa10.53□□□□□ -0.72
PTP1YDL230W YMR254CQ04838 102 aa10.53□□□□□ -0.72
PTP1YDL230W HOF1Q05080 669 aa10.53□□□□□ -0.72
PTP1YDL230W SWT1Q12104 458 aa10.53□□□□□ -0.72
PTP1YDL230W ATP16Q12165 160 aa10.53□□□□□ -0.72
PTP1YDL230W ATG40Q99325 256 aa10.53□□□□□ -0.72
PTP1YDL230W SPS4P09937 338 aa10.52□□□□□ -0.73
PTP1YDL230W ECM31P38122 312 aa10.52□□□□□ -0.73
PTP1YDL230W MOH1P38191 138 aa10.52□□□□□ -0.73
PTP1YDL230W RSM10Q03201 203 aa10.52□□□□□ -0.73
PTP1YDL230W GMC1Q04399 608 aa10.52□□□□□ -0.73
PTP1YDL230W FIT1Q04433 528 aa10.52□□□□□ -0.73
PTP1YDL230W FOL3Q12676 427 aaPredicted RBP10.52□□□□□ -0.73
PTP1YDL230W COX19Q3E731 98 aa10.52□□□□□ -0.73
PTP1YDL230W MET3P08536 511 aa10.51□□□□□ -0.73
PTP1YDL230W YUH1P35127 236 aa10.51□□□□□ -0.73
PTP1YDL230W NTC20P38302 140 aaPredicted RBP10.51□□□□□ -0.73
PTP1YDL230W PIG2P40187 538 aa10.51□□□□□ -0.73
PTP1YDL230W SEC24P40482 926 aaKnown RBP10.51□□□□□ -0.73
PTP1YDL230W TDA6Q06466 467 aa10.51□□□□□ -0.73
PTP1YDL230W YOR015WQ12169 119 aa10.51□□□□□ -0.73
PTP1YDL230W ATG5Q12380 294 aa10.51□□□□□ -0.73
PTP1YDL230W AIM45Q12480 344 aaKnown RBP10.51□□□□□ -0.73
PTP1YDL230W RPL35AP0CX84 120 aaKnown RBP10.5□□□□□ -0.73
PTP1YDL230W RPL35BP0CX85 120 aaKnown RBP10.5□□□□□ -0.73
PTP1YDL230W SLM6P38343 150 aa10.5□□□□□ -0.73
PTP1YDL230W YIP5P53108 310 aa10.5□□□□□ -0.73
PTP1YDL230W ASM4Q05166 528 aa10.5□□□□□ -0.73
PTP1YDL230W ALG6Q12001 544 aaKnown RBP10.5□□□□□ -0.73
PTP1YDL230W WHI5Q12416 295 aa10.5□□□□□ -0.73
PTP1YDL230W YCR025CP25352 136 aa10.49□□□□□ -0.73
PTP1YDL230W CLB6P32943 380 aa10.49□□□□□ -0.73
PTP1YDL230W PRS3P38689 320 aaKnown RBP10.49□□□□□ -0.73
PTP1YDL230W SPC25P40014 221 aa10.49□□□□□ -0.73
PTP1YDL230W EGT2P42835 1041 aa10.49□□□□□ -0.73
PTP1YDL230W SIP18P50263 79 aa10.49□□□□□ -0.73
PTP1YDL230W TEX1P53851 422 aaKnown RBP10.49□□□□□ -0.73
PTP1YDL230W TMA23Q03525 211 aa10.49□□□□□ -0.73
PTP1YDL230W YMR090WQ04304 227 aaKnown RBP10.49□□□□□ -0.73
PTP1YDL230W DPB4Q04603 196 aaKnown RBP10.49□□□□□ -0.73
PTP1YDL230W RIM9Q04734 239 aa10.49□□□□□ -0.73
PTP1YDL230W YOR292CQ08743 309 aa10.49□□□□□ -0.73
PTP1YDL230W MSL5Q12186 476 aaKnown RBP RIP-Chip data10.49□□□□□ -0.73not detected
PTP1YDL230W YBR255C-AQ3E776 120 aa10.49□□□□□ -0.73
PTP1YDL230W SEN1Q00416 2231 aaKnown RBP10.49□□□□□ -0.73
PTP1YDL230W HEM4P06174 275 aa10.48□□□□□ -0.73
PTP1YDL230W MRPL33P20084 86 aa10.48□□□□□ -0.73
PTP1YDL230W ELO2P25358 347 aa10.48□□□□□ -0.73
PTP1YDL230W IKI1P38874 309 aa10.48□□□□□ -0.73
PTP1YDL230W FLO5P38894 1075 aa10.48□□□□□ -0.73
PTP1YDL230W TAF4P50105 388 aa10.48□□□□□ -0.73
PTP1YDL230W YDC1Q02896 317 aa10.48□□□□□ -0.73
PTP1YDL230W SHG1P38337 142 aa10.47□□□□□ -0.73
PTP1YDL230W YMR262WP38430 313 aa10.47□□□□□ -0.73
PTP1YDL230W POG1P40473 351 aa10.47□□□□□ -0.73
PTP1YDL230W XPT1P47165 209 aa10.47□□□□□ -0.73
PTP1YDL230W HHO1P53551 258 aa10.47□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms