RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeastyeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH3YCR092C COX15P40086 486 aa1.11□□□□□ -2.23
MSH3YCR092C GPP2P40106 250 aaKnown RBP1.11□□□□□ -2.23
MSH3YCR092C RTS2P40962 232 aa1.11□□□□□ -2.23
MSH3YCR092C MSS2P40990 351 aa1.11□□□□□ -2.23
MSH3YCR092C FMP32P43557 207 aa1.11□□□□□ -2.23
MSH3YCR092C YJR096WP47137 282 aa1.11□□□□□ -2.23
MSH3YCR092C TDA4P47153 279 aa1.11□□□□□ -2.23
MSH3YCR092C MRH4P53166 561 aa1.11□□□□□ -2.23
MSH3YCR092C MET31Q03081 177 aa1.11□□□□□ -2.23
MSH3YCR092C ATG39Q06159 398 aa1.11□□□□□ -2.23
MSH3YCR092C STP4Q07351 490 aa1.11□□□□□ -2.23
MSH3YCR092C IRC25Q07951 179 aa1.11□□□□□ -2.23
MSH3YCR092C TMA17Q12513 150 aa1.11□□□□□ -2.23
MSH3YCR092C CDC31P06704 161 aaKnown RBP1.1□□□□□ -2.23
MSH3YCR092C MRS3P10566 314 aa1.1□□□□□ -2.23
MSH3YCR092C MDM10P18409 493 aa1.1□□□□□ -2.23
MSH3YCR092C PEX3P28795 441 aa1.1□□□□□ -2.23
MSH3YCR092C FUN26P31381 517 aa1.1□□□□□ -2.23
MSH3YCR092C HBS1P32769 611 aaKnown RBP1.1□□□□□ -2.23
MSH3YCR092C LHP1P33399 275 aaKnown RBP1.1□□□□□ -2.23
MSH3YCR092C COS9P36034 407 aa1.1□□□□□ -2.23
MSH3YCR092C PMU1P36069 295 aa1.1□□□□□ -2.23
MSH3YCR092C DOG2P38773 246 aa1.1□□□□□ -2.23
MSH3YCR092C DOG1P38774 246 aa1.1□□□□□ -2.23
MSH3YCR092C AVT6P40074 448 aa1.1□□□□□ -2.23
MSH3YCR092C SPC1P46965 94 aa1.1□□□□□ -2.23
MSH3YCR092C YAE1P47118 141 aaPredicted RBP1.1□□□□□ -2.23
MSH3YCR092C VMA10P48836 114 aaKnown RBP1.1□□□□□ -2.23
MSH3YCR092C CAF40P53829 373 aa1.1□□□□□ -2.23
MSH3YCR092C YMR315WQ04869 349 aaKnown RBP1.1□□□□□ -2.23
MSH3YCR092C YPD1Q07688 167 aa1.1□□□□□ -2.23
MSH3YCR092C YCL048W-AQ2V2Q2 79 aa1.1□□□□□ -2.23
MSH3YCR092C PRP8P33334 2413 aaKnown RBP1.1□□□□□ -2.23
MSH3YCR092C HTB1P02293 131 aaKnown RBP1.1□□□□□ -2.23
MSH3YCR092C ATR1P13090 542 aa1.1□□□□□ -2.23
MSH3YCR092C CCA1P21269 546 aa1.1□□□□□ -2.23
MSH3YCR092C IDP1P21954 428 aaKnown RBP1.1□□□□□ -2.23
MSH3YCR092C GIT1P25346 518 aa1.1□□□□□ -2.23
MSH3YCR092C RRP43P25359 394 aaPredicted RBP1.1□□□□□ -2.23
MSH3YCR092C HOM6P31116 359 aaKnown RBP1.1□□□□□ -2.23
MSH3YCR092C SNC2P33328 115 aa1.1□□□□□ -2.23
MSH3YCR092C NAT2P37293 288 aa1.1□□□□□ -2.23
MSH3YCR092C RTC2P38279 296 aa1.1□□□□□ -2.23
MSH3YCR092C CIN4P39110 191 aa1.1□□□□□ -2.23
MSH3YCR092C RRG9P40156 214 aa1.1□□□□□ -2.23
MSH3YCR092C SNL1P40548 159 aa1.1□□□□□ -2.23
MSH3YCR092C SNX4P47057 423 aa1.1□□□□□ -2.23
MSH3YCR092C COS6P53344 381 aa1.1□□□□□ -2.23
MSH3YCR092C ATP23P53722 227 aa1.1□□□□□ -2.23
MSH3YCR092C ASI2P53895 289 aa1.1□□□□□ -2.23
MSH3YCR092C APJ1P53940 528 aa1.1□□□□□ -2.23
MSH3YCR092C ERI1P62651 68 aaKnown RBP1.1□□□□□ -2.23
MSH3YCR092C COX12Q01519 83 aa1.1□□□□□ -2.23
MSH3YCR092C RGC1Q06108 1083 aaKnown RBP1.1□□□□□ -2.23
MSH3YCR092C LDS2Q08218 356 aa1.1□□□□□ -2.23
MSH3YCR092C SCM3Q12334 223 aa1.1□□□□□ -2.23
MSH3YCR092C PST2Q12335 198 aaKnown RBP1.1□□□□□ -2.23
MSH3YCR092C MPD1Q12404 318 aaKnown RBP1.1□□□□□ -2.23
MSH3YCR092C NKP1Q12493 238 aa1.1□□□□□ -2.23
MSH3YCR092C YKL068W-AQ3E826 78 aa1.1□□□□□ -2.23
MSH3YCR092C ATG40Q99325 256 aa1.1□□□□□ -2.23
MSH3YCR092C RPS11AP0CX47 156 aaKnown RBP1.09□□□□□ -2.23
MSH3YCR092C RPS11BP0CX48 156 aaKnown RBP1.09□□□□□ -2.23
MSH3YCR092C MRPL20P22354 195 aaPredicted RBP1.09□□□□□ -2.23
MSH3YCR092C RHB1P25378 209 aa1.09□□□□□ -2.23
MSH3YCR092C YCR061WP25639 631 aa1.09□□□□□ -2.23
MSH3YCR092C ERV1P27882 189 aa1.09□□□□□ -2.23
MSH3YCR092C YPS1P32329 569 aa1.09□□□□□ -2.23
MSH3YCR092C YBR063CP38083 404 aa1.09□□□□□ -2.23
MSH3YCR092C ECM8P38246 354 aa1.09□□□□□ -2.23
MSH3YCR092C RPS20P38701 121 aaKnown RBP1.09□□□□□ -2.23
MSH3YCR092C HTD2P38790 280 aaKnown RBP1.09□□□□□ -2.23
MSH3YCR092C YNL200CP40165 246 aaKnown RBP1.09□□□□□ -2.23
MSH3YCR092C YNL195CP40168 261 aa1.09□□□□□ -2.23
MSH3YCR092C SAS2P40963 338 aa1.09□□□□□ -2.23
MSH3YCR092C RMR1P53060 241 aa1.09□□□□□ -2.23
MSH3YCR092C ALG13P53178 202 aa1.09□□□□□ -2.23
MSH3YCR092C POP6P53218 158 aa1.09□□□□□ -2.23
MSH3YCR092C NUP49Q02199 472 aa1.09□□□□□ -2.23
MSH3YCR092C MSS11Q03825 758 aa1.09□□□□□ -2.23
MSH3YCR092C UTP15Q04305 513 aaKnown RBP1.09□□□□□ -2.23
MSH3YCR092C YLR345WQ06137 509 aa1.09□□□□□ -2.23
MSH3YCR092C BTS1Q12051 335 aa1.09□□□□□ -2.23
MSH3YCR092C YDL009CQ12210 107 aa1.09□□□□□ -2.23
MSH3YCR092C VAM3Q12241 283 aa1.09□□□□□ -2.23
MSH3YCR092C MED11Q99278 115 aa1.09□□□□□ -2.23
MSH3YCR092C ADK1P07170 222 aaKnown RBP1.09□□□□□ -2.23
MSH3YCR092C DST1P07273 309 aa1.09□□□□□ -2.23
MSH3YCR092C PPA2P28239 310 aa1.09□□□□□ -2.23
MSH3YCR092C MRP49P32388 137 aa1.09□□□□□ -2.23
MSH3YCR092C PRP21P32524 280 aaPredicted RBP1.09□□□□□ -2.23
MSH3YCR092C YKL069WP36088 180 aa1.09□□□□□ -2.23
MSH3YCR092C PEX32P38292 413 aa1.09□□□□□ -2.23
MSH3YCR092C SDH8P38345 138 aa1.09□□□□□ -2.23
MSH3YCR092C AGE2P40529 298 aa1.09□□□□□ -2.23
MSH3YCR092C CAK1P43568 368 aaPredicted RBP1.09□□□□□ -2.23
MSH3YCR092C MSO1P53604 210 aaKnown RBP1.09□□□□□ -2.23
MSH3YCR092C GIS2P53849 153 aaKnown RBP RIP-Chip data1.09□□□□□ -2.23not detected
MSH3YCR092C LOA1Q06508 300 aa1.09□□□□□ -2.23
MSH3YCR092C PBP4Q07362 185 aaKnown RBP1.09□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms