RNA–Protein interactions for RNA: YBR289W

SNF5, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF5, Length 2,718 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF5YBR289W RFA3P26755 122 aaKnown RBP1.17□□□□□ -2.22
SNF5YBR289W PPA2P28239 310 aa1.17□□□□□ -2.22
SNF5YBR289W RME1P32338 300 aaKnown RBP1.17□□□□□ -2.22
SNF5YBR289W COS8P38723 381 aa1.17□□□□□ -2.22
SNF5YBR289W SNX4P47057 423 aa1.17□□□□□ -2.22
SNF5YBR289W MIC26P50087 233 aa1.17□□□□□ -2.22
SNF5YBR289W SNZ1Q03148 297 aa1.17□□□□□ -2.22
SNF5YBR289W TUS1Q06412 1307 aa1.16□□□□□ -2.22
SNF5YBR289W NHP6BP11633 99 aaKnown RBP1.16□□□□□ -2.22
SNF5YBR289W COQ1P18900 473 aa1.16□□□□□ -2.22
SNF5YBR289W OAC1P32332 324 aa1.16□□□□□ -2.22
SNF5YBR289W PRP18P33411 251 aaPredicted RBP1.16□□□□□ -2.22
SNF5YBR289W CBT1P36038 271 aaPredicted RBP1.16□□□□□ -2.22
SNF5YBR289W UTP30P36144 274 aaKnown RBP1.16□□□□□ -2.22
SNF5YBR289W YNL194CP40169 301 aa1.16□□□□□ -2.22
SNF5YBR289W BNA7Q04066 261 aa1.16□□□□□ -2.22
SNF5YBR289W BBP1Q12365 385 aa1.16□□□□□ -2.22
SNF5YBR289W NUM1Q00402 2748 aa1.16□□□□□ -2.22
SNF5YBR289W ULS1Q08562 1619 aa1.16□□□□□ -2.22
SNF5YBR289W IML1P47170 1584 aa1.16□□□□□ -2.22
SNF5YBR289W RPO21P04050 1733 aaKnown RBP1.16□□□□□ -2.22
SNF5YBR289W SNF2P22082 1703 aa1.16□□□□□ -2.22
SNF5YBR289W PDR12Q02785 1511 aa1.16□□□□□ -2.22
SNF5YBR289W IQG1Q12280 1495 aa1.16□□□□□ -2.22
SNF5YBR289W SCL1P21243 252 aaKnown RBP1.16□□□□□ -2.22
SNF5YBR289W DBF2P22204 572 aa1.16□□□□□ -2.22
SNF5YBR289W MEI4P29467 408 aa1.16□□□□□ -2.22
SNF5YBR289W MRPL39P36533 70 aa1.16□□□□□ -2.22
SNF5YBR289W AST2P39945 430 aaKnown RBP1.16□□□□□ -2.22
SNF5YBR289W ARC15P40518 154 aaRIP-Chip data1.16□□□□□ -2.22not detected
SNF5YBR289W HAM1P47119 197 aaKnown RBP1.16□□□□□ -2.22
SNF5YBR289W YNL010WP53981 241 aaKnown RBP1.16□□□□□ -2.22
SNF5YBR289W GOT1Q03554 138 aa1.16□□□□□ -2.22
SNF5YBR289W SNU23Q12368 194 aaPredicted RBP1.16□□□□□ -2.22
SNF5YBR289W EMC6Q12431 108 aa1.16□□□□□ -2.22
SNF5YBR289W CDC28P00546 298 aaKnown RBP1.15□□□□□ -2.23
SNF5YBR289W RPL24BP24000 155 aaKnown RBP1.15□□□□□ -2.23
SNF5YBR289W BRR6P53062 197 aa1.15□□□□□ -2.23
SNF5YBR289W YGR050CP53231 118 aa1.15□□□□□ -2.23
SNF5YBR289W RHO3Q00245 231 aaKnown RBP1.15□□□□□ -2.23
SNF5YBR289W SMD2Q06217 110 aaKnown RBP1.15□□□□□ -2.23
SNF5YBR289W GET4Q12125 312 aa1.15□□□□□ -2.23
SNF5YBR289W DCN1Q12395 269 aa1.15□□□□□ -2.23
SNF5YBR289W TY1B-HO13535 1793 aa1.15□□□□□ -2.23
SNF5YBR289W TY1B-DR5P0C2I2 1755 aa1.15□□□□□ -2.23
SNF5YBR289W TY1B-DR6P0C2I3 1755 aa1.15□□□□□ -2.23
SNF5YBR289W TY1B-LR2P0C2I5 1755 aa1.15□□□□□ -2.23
SNF5YBR289W TY1B-LR3P0C2I6 1755 aaKnown RBP1.15□□□□□ -2.23
SNF5YBR289W TY1B-PR1P0C2I9 1755 aaKnown RBP1.15□□□□□ -2.23
SNF5YBR289W TY1B-PR2P0C2J0 1756 aa1.15□□□□□ -2.23
SNF5YBR289W TY1B-PR3P0C2J1 1755 aaKnown RBP1.15□□□□□ -2.23
SNF5YBR289W TY1B-JR1P47098 1755 aa1.15□□□□□ -2.23
SNF5YBR289W TY1B-ML2Q03434 1755 aaKnown RBP1.15□□□□□ -2.23
SNF5YBR289W TY1B-ER1Q03612 1755 aa1.15□□□□□ -2.23
SNF5YBR289W TY1B-ML1Q04711 1755 aaKnown RBP1.15□□□□□ -2.23
SNF5YBR289W TY1B-GR2Q12269 1755 aa1.15□□□□□ -2.23
SNF5YBR289W TY1B-OLQ12273 1755 aa1.15□□□□□ -2.23
SNF5YBR289W TY1B-PLQ12414 1755 aaKnown RBP1.15□□□□□ -2.23
SNF5YBR289W DDI2P0CH63 225 aa1.15□□□□□ -2.23
SNF5YBR289W DDI3P0CH64 225 aa1.15□□□□□ -2.23
SNF5YBR289W URA6P15700 204 aa1.15□□□□□ -2.23
SNF5YBR289W YPK2P18961 677 aa1.15□□□□□ -2.23
SNF5YBR289W MNN5P46982 586 aa1.15□□□□□ -2.23
SNF5YBR289W YJR056CP47115 236 aa1.15□□□□□ -2.23
SNF5YBR289W DSK2P48510 373 aa1.15□□□□□ -2.23
SNF5YBR289W YNR062CP53748 327 aa1.15□□□□□ -2.23
SNF5YBR289W MCP1Q12106 302 aa1.15□□□□□ -2.23
SNF5YBR289W YHR086W-AQ3E746 53 aa1.15□□□□□ -2.23
SNF5YBR289W POL1P13382 1468 aa1.14□□□□□ -2.23
SNF5YBR289W SMC4Q12267 1418 aa1.14□□□□□ -2.23
SNF5YBR289W TY2B-LR1P0C2J3 1770 aa1.14□□□□□ -2.23
SNF5YBR289W TY2B-FP0CX63 1770 aa1.14□□□□□ -2.23
SNF5YBR289W TY2B-GR2P0CX64 1770 aa1.14□□□□□ -2.23
SNF5YBR289W TY2B-CP25384 1770 aa1.14□□□□□ -2.23
SNF5YBR289W TY2B-DR2Q03494 1770 aa1.14□□□□□ -2.23
SNF5YBR289W TY1B-DR1Q03855 1755 aa1.14□□□□□ -2.23
SNF5YBR289W TY2B-DR3Q07791 1770 aaKnown RBP1.14□□□□□ -2.23
SNF5YBR289W TY2B-OR1Q12113 1770 aa1.14□□□□□ -2.23
SNF5YBR289W TY2B-DR1Q12472 1770 aa1.14□□□□□ -2.23
SNF5YBR289W TY2B-OR2Q12501 1770 aa1.14□□□□□ -2.23
SNF5YBR289W MATALPHA2P0CY08 210 aa1.14□□□□□ -2.23
SNF5YBR289W HMLALPHA2P0CY09 210 aa1.14□□□□□ -2.23
SNF5YBR289W YGP1P38616 354 aaKnown RBP1.14□□□□□ -2.23
SNF5YBR289W YRB2P40517 327 aa1.14□□□□□ -2.23
SNF5YBR289W CUS2P53830 285 aaPredicted RBP1.14□□□□□ -2.23
SNF5YBR289W MRPS8Q03799 155 aa1.14□□□□□ -2.23
SNF5YBR289W LPP1Q04396 274 aa1.14□□□□□ -2.23
SNF5YBR289W RAD9P14737 1309 aa1.14□□□□□ -2.23
SNF5YBR289W CBF1P17106 351 aa1.14□□□□□ -2.23
SNF5YBR289W STE18P18852 110 aa1.14□□□□□ -2.23
SNF5YBR289W ADE1P27616 306 aa1.14□□□□□ -2.23
SNF5YBR289W ARC19P33204 171 aaKnown RBP1.14□□□□□ -2.23
SNF5YBR289W NRG2P38082 220 aa1.14□□□□□ -2.23
SNF5YBR289W YHL026CP38740 315 aa1.14□□□□□ -2.23
SNF5YBR289W RFC4P40339 323 aaKnown RBP1.14□□□□□ -2.23
SNF5YBR289W BOL2P53082 120 aa1.14□□□□□ -2.23
SNF5YBR289W NSA1P53136 463 aaPredicted RBP1.14□□□□□ -2.23
SNF5YBR289W ATG39Q06159 398 aa1.14□□□□□ -2.23
SNF5YBR289W HEM25Q07534 307 aa1.14□□□□□ -2.23
SNF5YBR289W YRA1Q12159 226 aaKnown RBP1.14□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms