RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W NVJ1P38881 321 aa1.89□□□□□ -2.11
NUP170YBL079W LYS20P48570 428 aaKnown RBP1.89□□□□□ -2.11
NUP170YBL079W PRM8P53174 237 aa1.89□□□□□ -2.11
NUP170YBL079W SMX3P54999 86 aaPredicted RBP1.89□□□□□ -2.11
NUP170YBL079W OST6Q03723 332 aa1.89□□□□□ -2.11
NUP170YBL079W PAM18Q07914 168 aa1.89□□□□□ -2.11
NUP170YBL079W HRT1Q08273 121 aa1.89□□□□□ -2.11
NUP170YBL079W VPS63O13549 108 aa1.88□□□□□ -2.11
NUP170YBL079W CDS1P38221 457 aa1.88□□□□□ -2.11
NUP170YBL079W TRM5P38793 499 aa1.88□□□□□ -2.11
NUP170YBL079W YJL118WP47022 219 aa1.88□□□□□ -2.11
NUP170YBL079W ERI1P62651 68 aaKnown RBP1.88□□□□□ -2.11
NUP170YBL079W NDC1P32500 655 aa1.88□□□□□ -2.11
NUP170YBL079W YBR184WP38299 523 aa1.88□□□□□ -2.11
NUP170YBL079W EGD2P38879 174 aaKnown RBP1.88□□□□□ -2.11
NUP170YBL079W TIR3P40552 269 aa1.88□□□□□ -2.11
NUP170YBL079W YAE1P47118 141 aaPredicted RBP1.88□□□□□ -2.11
NUP170YBL079W MSE1P48525 536 aa1.88□□□□□ -2.11
NUP170YBL079W SGF11Q03067 99 aa1.88□□□□□ -2.11
NUP170YBL079W MIX17Q03667 156 aa1.88□□□□□ -2.11
NUP170YBL079W GRH1Q04410 372 aaKnown RBP1.88□□□□□ -2.11
NUP170YBL079W UTP23Q12339 254 aaKnown RBP1.88□□□□□ -2.11
NUP170YBL079W RPL39P04650 51 aa1.88□□□□□ -2.11
NUP170YBL079W SNL1P40548 159 aa1.88□□□□□ -2.11
NUP170YBL079W OST1P41543 476 aaKnown RBP1.88□□□□□ -2.11
NUP170YBL079W PIR5P46999 287 aa1.88□□□□□ -2.11
NUP170YBL079W WSC2P53832 503 aa1.88□□□□□ -2.11
NUP170YBL079W ACT1P60010 375 aaKnown RBP1.88□□□□□ -2.11
NUP170YBL079W SDS24P38314 527 aa1.87□□□□□ -2.11
NUP170YBL079W MTC6P38849 526 aa1.87□□□□□ -2.11
NUP170YBL079W YFR054CP43622 192 aa1.87□□□□□ -2.11
NUP170YBL079W CPR8P53728 308 aa1.87□□□□□ -2.11
NUP170YBL079W ERV25P54837 211 aaKnown RBP1.87□□□□□ -2.11
NUP170YBL079W FIT1Q04433 528 aa1.87□□□□□ -2.11
NUP170YBL079W MCH1Q07376 486 aa1.87□□□□□ -2.11
NUP170YBL079W FRE5Q08908 694 aa1.87□□□□□ -2.11
NUP170YBL079W TFC7Q12415 435 aa1.87□□□□□ -2.11
NUP170YBL079W EAF3Q12432 401 aa1.87□□□□□ -2.11
NUP170YBL079W UBA3Q99344 299 aa1.87□□□□□ -2.11
NUP170YBL079W ERS1P17261 260 aa1.87□□□□□ -2.11
NUP170YBL079W IMP1P28627 190 aa1.87□□□□□ -2.11
NUP170YBL079W MIX23P38162 196 aa1.87□□□□□ -2.11
NUP170YBL079W MCM22P47167 239 aa1.87□□□□□ -2.11
NUP170YBL079W GNP1P48813 663 aa1.87□□□□□ -2.11
NUP170YBL079W SNZ1Q03148 297 aa1.87□□□□□ -2.11
NUP170YBL079W MSC3Q05812 728 aa1.87□□□□□ -2.11
NUP170YBL079W LOA1Q06508 300 aa1.87□□□□□ -2.11
NUP170YBL079W SDO1Q07953 250 aaKnown RBP1.87□□□□□ -2.11
NUP170YBL079W NKP1Q12493 238 aa1.87□□□□□ -2.11
NUP170YBL079W YPR145C-AQ2V2P0 78 aa1.87□□□□□ -2.11
NUP170YBL079W YGL258W-AQ3E740 77 aa1.87□□□□□ -2.11
NUP170YBL079W GPM1P00950 247 aaKnown RBP1.87□□□□□ -2.11
NUP170YBL079W PRE7P23724 241 aaKnown RBP1.87□□□□□ -2.11
NUP170YBL079W ERV1P27882 189 aa1.87□□□□□ -2.11
NUP170YBL079W BAP2P38084 609 aa1.87□□□□□ -2.11
NUP170YBL079W YHR122WP38829 231 aa1.87□□□□□ -2.11
NUP170YBL079W POR2P40478 281 aa1.87□□□□□ -2.11
NUP170YBL079W YCH1P42937 148 aa1.87□□□□□ -2.11
NUP170YBL079W HED1Q03937 162 aa1.87□□□□□ -2.11
NUP170YBL079W YHP1Q04116 353 aa1.87□□□□□ -2.11
NUP170YBL079W SSK1Q07084 712 aa1.87□□□□□ -2.11
NUP170YBL079W ADE8P04161 214 aa1.87□□□□□ -2.11
NUP170YBL079W MLF3P32047 452 aa1.87□□□□□ -2.11
NUP170YBL079W FLO10P36170 1169 aa1.87□□□□□ -2.11
NUP170YBL079W SWD3P38123 315 aa1.87□□□□□ -2.11
NUP170YBL079W CIN4P39110 191 aa1.87□□□□□ -2.11
NUP170YBL079W MPM1P40364 252 aa1.87□□□□□ -2.11
NUP170YBL079W GON7P46984 123 aa1.87□□□□□ -2.11
NUP170YBL079W GWT1P47026 490 aa1.87□□□□□ -2.11
NUP170YBL079W YGL185CP53100 379 aa1.87□□□□□ -2.11
NUP170YBL079W ALG9P53868 555 aaKnown RBP1.87□□□□□ -2.11
NUP170YBL079W SNO1Q03144 224 aa1.87□□□□□ -2.11
NUP170YBL079W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
NUP170YBL079W SLF1Q12034 447 aaKnown RBP1.87□□□□□ -2.11
NUP170YBL079W PHD1P36093 366 aa1.86□□□□□ -2.11
NUP170YBL079W YLR179CQ06252 201 aaKnown RBP1.86□□□□□ -2.11
NUP170YBL079W SOG2Q08817 791 aa1.86□□□□□ -2.11
NUP170YBL079W JID1Q12350 301 aa1.86□□□□□ -2.11
NUP170YBL079W YKL018C-AQ3E7A7 99 aa1.86□□□□□ -2.11
NUP170YBL079W COX5BP00425 151 aa1.86□□□□□ -2.11
NUP170YBL079W RAS1P01119 309 aa1.86□□□□□ -2.11
NUP170YBL079W NTG1P31378 399 aa1.86□□□□□ -2.11
NUP170YBL079W MRPL38P35996 138 aaPredicted RBP1.86□□□□□ -2.11
NUP170YBL079W ECM8P38246 354 aa1.86□□□□□ -2.11
NUP170YBL079W YBR137WP38276 179 aa1.86□□□□□ -2.11
NUP170YBL079W MBA1P38300 278 aa1.86□□□□□ -2.11
NUP170YBL079W SCP1Q08873 200 aa1.86□□□□□ -2.11
NUP170YBL079W YLR365WQ7LIF2 110 aa1.86□□□□□ -2.11
NUP170YBL079W RPL11AP0C0W9 174 aaKnown RBP1.86□□□□□ -2.11
NUP170YBL079W YBL010CP32788 280 aa1.86□□□□□ -2.11
NUP170YBL079W COS8P38723 381 aa1.86□□□□□ -2.11
NUP170YBL079W HPM1P40481 377 aa1.86□□□□□ -2.11
NUP170YBL079W TIM21P53220 239 aa1.86□□□□□ -2.11
NUP170YBL079W SLX9P53251 210 aaPredicted RBP1.86□□□□□ -2.11
NUP170YBL079W CAB5Q03941 241 aa1.86□□□□□ -2.11
NUP170YBL079W YOR292CQ08743 309 aa1.86□□□□□ -2.11
NUP170YBL079W RPL11BQ3E757 174 aaPredicted RBP1.86□□□□□ -2.11
NUP170YBL079W GCN4P03069 281 aa1.85□□□□□ -2.11
NUP170YBL079W STE18P18852 110 aa1.85□□□□□ -2.11
NUP170YBL079W MRP17P28778 131 aa1.85□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 110.2 ms