RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 CLSTN1O94985 981 aa18.87■□□□□ 0.61
PHGDH-232ENST00000641947 MOCS3O95396 460 aa18.87■□□□□ 0.61
PHGDH-232ENST00000641947 MMEP08473 750 aa18.87■□□□□ 0.61
PHGDH-232ENST00000641947 KRT19P08727 400 aa18.87■□□□□ 0.61
PHGDH-232ENST00000641947 HSPA6P17066 643 aa18.87■□□□□ 0.61
PHGDH-232ENST00000641947 CASQ1P31415 396 aa18.87■□□□□ 0.61
PHGDH-232ENST00000641947 PTK7Q13308 1070 aa18.87■□□□□ 0.61
PHGDH-232ENST00000641947 SCARA5Q6ZMJ2 495 aa18.87■□□□□ 0.61
PHGDH-232ENST00000641947 VPS36Q86VN1 386 aa18.87■□□□□ 0.61
PHGDH-232ENST00000641947 ARRDC4Q8NCT1 418 aa18.87■□□□□ 0.61
PHGDH-232ENST00000641947 KIF12Q96FN5 646 aa18.87■□□□□ 0.61
PHGDH-232ENST00000641947 FAM81BQ96LP2 452 aa18.87■□□□□ 0.61
PHGDH-232ENST00000641947 NIF3L1Q9GZT8 377 aa18.87■□□□□ 0.61
PHGDH-232ENST00000641947 MYO1AQ9UBC5 1043 aa18.87■□□□□ 0.61
PHGDH-232ENST00000641947 CNTN6Q9UQ52 1028 aa18.87■□□□□ 0.61
PHGDH-232ENST00000641947 IPPQ9Y573 584 aa18.87■□□□□ 0.61
PHGDH-232ENST00000641947 TNFAIP3P21580 790 aa18.86■□□□□ 0.61
PHGDH-232ENST00000641947 TBXAS1P24557 533 aaPredicted RBP18.86■□□□□ 0.61
PHGDH-232ENST00000641947 POLR2BP30876 1174 aaKnown RBP18.86■□□□□ 0.61
PHGDH-232ENST00000641947 PTPN11Q06124 597 aaPredicted RBP18.86■□□□□ 0.61
PHGDH-232ENST00000641947 GLRA4Q5JXX5 417 aa18.86■□□□□ 0.61
PHGDH-232ENST00000641947 APBB1IPQ7Z5R6 666 aaPredicted RBP18.86■□□□□ 0.61
PHGDH-232ENST00000641947 SECISBP2LQ93073 1101 aaKnown RBP18.86■□□□□ 0.61
PHGDH-232ENST00000641947 BEGAINQ9BUH8 593 aa18.86■□□□□ 0.61
PHGDH-232ENST00000641947 IMPG2Q9BZV3 1241 aa18.86■□□□□ 0.61
PHGDH-232ENST00000641947 PAK6Q9NQU5 681 aaPredicted RBP18.86■□□□□ 0.61
PHGDH-232ENST00000641947 SEPT11Q9NVA2 429 aaKnown RBP18.86■□□□□ 0.61
PHGDH-232ENST00000641947 KLK14Q9P0G3 267 aa18.86■□□□□ 0.61
PHGDH-232ENST00000641947 CNTN3Q9P232 1028 aa18.86■□□□□ 0.61
PHGDH-232ENST00000641947 TUBGCP4Q9UGJ1 667 aa18.86■□□□□ 0.61
PHGDH-232ENST00000641947 PHF24Q9UPV7 400 aa18.86■□□□□ 0.61
PHGDH-232ENST00000641947 PPEF2O14830 753 aa18.86■□□□□ 0.61
PHGDH-232ENST00000641947 ZNF132P52740 706 aa18.86■□□□□ 0.61
PHGDH-232ENST00000641947 NFX1Q12986 1120 aaKnown RBP18.86■□□□□ 0.61
PHGDH-232ENST00000641947 ZBTB6Q15916 424 aa18.86■□□□□ 0.61
PHGDH-232ENST00000641947 FBXO47Q5MNV8 452 aa18.86■□□□□ 0.61
PHGDH-232ENST00000641947 C10orf76Q5T2E6 689 aa18.86■□□□□ 0.61
PHGDH-232ENST00000641947 TWF2Q6IBS0 349 aaKnown RBP18.86■□□□□ 0.61
PHGDH-232ENST00000641947 TRAF7Q6Q0C0 670 aa18.86■□□□□ 0.61
PHGDH-232ENST00000641947 TMEM270Q6UE05 265 aa18.86■□□□□ 0.61
PHGDH-232ENST00000641947 C18orf25Q96B23 403 aaPredicted RBP18.86■□□□□ 0.61
PHGDH-232ENST00000641947 PLEKHA5Q9HAU0 1116 aa18.86■□□□□ 0.61
PHGDH-232ENST00000641947 STARD7Q9NQZ5 370 aa18.86■□□□□ 0.61
PHGDH-232ENST00000641947 DPP3Q9NY33 737 aa18.86■□□□□ 0.61
PHGDH-232ENST00000641947 PCDHB4Q9Y5E5 795 aa18.86■□□□□ 0.61
PHGDH-232ENST00000641947 ATP8B3O60423 1300 aa18.85■□□□□ 0.61
PHGDH-232ENST00000641947 MEIS3P2A8K0S8 358 aa18.85■□□□□ 0.61
PHGDH-232ENST00000641947 BUB1O43683 1085 aa18.85■□□□□ 0.61
PHGDH-232ENST00000641947 GHRP10912 638 aa18.85■□□□□ 0.61
PHGDH-232ENST00000641947 CD52P31358 61 aa18.85■□□□□ 0.61
PHGDH-232ENST00000641947 RAP1GAPP47736 663 aa18.85■□□□□ 0.61
PHGDH-232ENST00000641947 PDE6CP51160 858 aa18.85■□□□□ 0.61
PHGDH-232ENST00000641947 GALCP54803 685 aa18.85■□□□□ 0.61
PHGDH-232ENST00000641947 CDR2Q01850 454 aa18.85■□□□□ 0.61
PHGDH-232ENST00000641947 LPIN1Q14693 890 aa18.85■□□□□ 0.61
PHGDH-232ENST00000641947 ZNF618Q5T7W0 954 aa18.85■□□□□ 0.61
PHGDH-232ENST00000641947 CD302Q8IX05 232 aa18.85■□□□□ 0.61
PHGDH-232ENST00000641947 SDCBP2Q9H190 292 aa18.85■□□□□ 0.61
PHGDH-232ENST00000641947 L2HGDHQ9H9P8 463 aa18.85■□□□□ 0.61
PHGDH-232ENST00000641947 ERVK-5Q9HDB9 667 aa18.85■□□□□ 0.61
PHGDH-232ENST00000641947 NOD1Q9Y239 953 aa18.85■□□□□ 0.61
PHGDH-232ENST00000641947 MKI67P46013 3256 aaKnown RBP18.85■□□□□ 0.61
PHGDH-232ENST00000641947 MGEA5O60502 916 aa18.84■□□□□ 0.61
PHGDH-232ENST00000641947 CFHP08603 1231 aa18.84■□□□□ 0.61
PHGDH-232ENST00000641947 WEE2P0C1S8 567 aa18.84■□□□□ 0.61
PHGDH-232ENST00000641947 CD58P19256 250 aa18.84■□□□□ 0.61
PHGDH-232ENST00000641947 XKR4Q5GH76 650 aa18.84■□□□□ 0.61
PHGDH-232ENST00000641947 FAM26DQ5JW98 314 aa18.84■□□□□ 0.61
PHGDH-232ENST00000641947 NT5DC4Q86YG4 428 aa18.84■□□□□ 0.61
PHGDH-232ENST00000641947 RBBP8NLQ8NC74 664 aaPredicted RBP18.84■□□□□ 0.61
PHGDH-232ENST00000641947 CISHQ9NSE2 258 aa18.84■□□□□ 0.61
PHGDH-232ENST00000641947 NXF1Q9UBU9 619 aaKnown RBP18.84■□□□□ 0.61
PHGDH-232ENST00000641947 ITGA11Q9UKX5 1188 aa18.84■□□□□ 0.61
PHGDH-232ENST00000641947 AGAP1Q9UPQ3 857 aa18.84■□□□□ 0.61
PHGDH-232ENST00000641947 DERAQ9Y315 318 aa18.84■□□□□ 0.61
PHGDH-232ENST00000641947 TDRD15B5MCY1 1934 aaKnown RBP18.84■□□□□ 0.61
PHGDH-232ENST00000641947 A0A0U1RQG5 324 aaPredicted RBP18.83■□□□□ 0.61
PHGDH-232ENST00000641947 RPLP2P05387 115 aaKnown RBP18.83■□□□□ 0.61
PHGDH-232ENST00000641947 YARSP54577 528 aaKnown RBP18.83■□□□□ 0.61
PHGDH-232ENST00000641947 DEFB118Q96PH6 123 aa18.83■□□□□ 0.61
PHGDH-232ENST00000641947 BCO2Q9BYV7 579 aa18.83■□□□□ 0.61
PHGDH-232ENST00000641947 SMYD3Q9H7B4 428 aa18.83■□□□□ 0.61
PHGDH-232ENST00000641947 VRTNQ9H8Y1 702 aa18.83■□□□□ 0.61
PHGDH-232ENST00000641947 LUC7LQ9NQ29 371 aaKnown RBP18.83■□□□□ 0.61
PHGDH-232ENST00000641947 PADI3Q9ULW8 664 aa18.83■□□□□ 0.61
PHGDH-232ENST00000641947 PCDHB2Q9Y5E7 798 aa18.83■□□□□ 0.61
PHGDH-232ENST00000641947 SMIM28A0A1B0GU29 152 aa18.83■□□□□ 0.6
PHGDH-232ENST00000641947 ENC1O14682 589 aa18.83■□□□□ 0.6
PHGDH-232ENST00000641947 URI1O94763 535 aaPredicted RBP18.83■□□□□ 0.6
PHGDH-232ENST00000641947 H2AFZP0C0S5 128 aa18.83■□□□□ 0.6
PHGDH-232ENST00000641947 MBTPS1Q14703 1052 aa18.83■□□□□ 0.6
PHGDH-232ENST00000641947 WDR72Q3MJ13 1102 aa18.83■□□□□ 0.6
PHGDH-232ENST00000641947 H2AFVQ71UI9 128 aa18.83■□□□□ 0.6
PHGDH-232ENST00000641947 LRRN4CLQ8ND94 238 aa18.83■□□□□ 0.6
PHGDH-232ENST00000641947 TAF4BQ92750 862 aa18.83■□□□□ 0.6
PHGDH-232ENST00000641947 ARHGEF26Q96DR7 871 aa18.83■□□□□ 0.6
PHGDH-232ENST00000641947 PARP2Q9UGN5 583 aa18.83■□□□□ 0.6
PHGDH-232ENST00000641947 BTNL10A8MVZ5 291 aa18.82■□□□□ 0.6
PHGDH-232ENST00000641947 KBTBD13C9JR72 458 aa18.82■□□□□ 0.6
PHGDH-232ENST00000641947 ARVCFO00192 962 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms