RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 PACSIN3Q9UKS6 424 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 LRCH1Q9Y2L9 728 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.58□□□□□ -0.08
SCARB2-227ENST00000640957 CCDC195A0A1B0GUA6 201 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 MEI4A8MW99 385 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 ASMTLO95671 621 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 PTPN4P29074 926 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 NPEPPSP55786 919 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 USP46P62068 366 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 PLCB3Q01970 1234 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 BTKQ06187 659 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 MOGSQ13724 837 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 ALYREFQ86V81 257 aaKnown RBP14.58□□□□□ -0.08
SCARB2-227ENST00000640957 PASD1Q8IV76 773 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 RIBC1Q8N443 379 aaPredicted RBP14.58□□□□□ -0.08
SCARB2-227ENST00000640957 CPA5Q8WXQ8 436 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 TTC17Q96AE7 1141 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 LZTS2Q9BRK4 669 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 SMYD3Q9H7B4 428 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 DAGLAQ9Y4D2 1042 aa14.58□□□□□ -0.08
SCARB2-227ENST00000640957 SORBS2O94875 1100 aaKnown RBP14.57□□□□□ -0.08
SCARB2-227ENST00000640957 PSMG1O95456 288 aa14.57□□□□□ -0.08
SCARB2-227ENST00000640957 SPATA31C1P0DKV0 1188 aa14.57□□□□□ -0.08
SCARB2-227ENST00000640957 MAGEA4P43358 317 aa14.57□□□□□ -0.08
SCARB2-227ENST00000640957 PARP6Q2NL67 630 aa14.57□□□□□ -0.08
SCARB2-227ENST00000640957 IRGCQ6NXR0 463 aa14.57□□□□□ -0.08
SCARB2-227ENST00000640957 PPP1R21Q6ZMI0 780 aa14.57□□□□□ -0.08
SCARB2-227ENST00000640957 ZNF75CPQ92670 426 aaPredicted RBP14.57□□□□□ -0.08
SCARB2-227ENST00000640957 CCDC124Q96CT7 223 aaKnown RBP14.57□□□□□ -0.08
SCARB2-227ENST00000640957 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.57□□□□□ -0.08
SCARB2-227ENST00000640957 TRAF3IP3Q9Y228 551 aa14.57□□□□□ -0.08
SCARB2-227ENST00000640957 FRMD4BQ9Y2L6 1034 aa14.57□□□□□ -0.08
SCARB2-227ENST00000640957 MYOCOSA0A1B0GUC4 107 aa14.57□□□□□ -0.08
SCARB2-227ENST00000640957 PDXKO00764 312 aa14.57□□□□□ -0.08
SCARB2-227ENST00000640957 GSC2O15499 205 aa14.57□□□□□ -0.08
SCARB2-227ENST00000640957 PFDN1O60925 122 aa14.57□□□□□ -0.08
SCARB2-227ENST00000640957 ESRRAP11474 423 aaPredicted RBP14.57□□□□□ -0.08
SCARB2-227ENST00000640957 YARSP54577 528 aaKnown RBP14.57□□□□□ -0.08
SCARB2-227ENST00000640957 SH3TC2Q8TF17 1288 aa14.57□□□□□ -0.08
SCARB2-227ENST00000640957 SAE1Q9UBE0 346 aaPredicted RBP14.57□□□□□ -0.08
SCARB2-227ENST00000640957 NCANO14594 1321 aa14.57□□□□□ -0.08
SCARB2-227ENST00000640957 EDF1O60869 148 aaKnown RBP14.56□□□□□ -0.08
SCARB2-227ENST00000640957 DCTN3O75935 186 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 HAUS5O94927 633 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 LYNP07948 512 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 KRT5P13647 590 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 ATF7P17544 494 aaPredicted RBP14.56□□□□□ -0.08
SCARB2-227ENST00000640957 PPP3CAQ08209 521 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.56□□□□□ -0.08
SCARB2-227ENST00000640957 PPP1R18Q6NYC8 613 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 ANKS1BQ7Z6G8 1248 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 CCDC77Q9BR77 488 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 PI4K2AQ9BTU6 479 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 THTPAQ9BU02 230 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 TMEM117Q9H0C3 514 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 MTMR4Q9NYA4 1195 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 SSTR1P30872 391 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 PGM1P36871 562 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 SLC34A1Q06495 639 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 NR1H3Q13133 447 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 LBRQ14739 615 aaKnown RBP14.56□□□□□ -0.08
SCARB2-227ENST00000640957 ODR4Q5SWX8 454 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 ZFPM1Q8IX07 1006 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 DDX4Q9NQI0 724 aaKnown RBP14.56□□□□□ -0.08
SCARB2-227ENST00000640957 TAS2R1Q9NYW7 299 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 KANSL3Q9P2N6 904 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 FAM237BA0A1B0GVD1 139 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 SIGLEC16A6NMB1 481 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 FAM86B1E9PN63 330 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 CREB3O43889 395 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 FAM86B2P0C5J1 330 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 IVDP26440 423 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 NRLP54845 237 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 IRX4P78413 519 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 PYDC1Q8WXC3 89 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 METTL14Q9HCE5 456 aaKnown RBP14.56□□□□□ -0.08
SCARB2-227ENST00000640957 RABGAP1Q9Y3P9 1069 aa14.56□□□□□ -0.08
SCARB2-227ENST00000640957 B2RBV5 119 aa14.55□□□□□ -0.08
SCARB2-227ENST00000640957 MAGEA10P43363 369 aaPredicted RBP14.55□□□□□ -0.08
SCARB2-227ENST00000640957 PPP2R5EQ16537 467 aa14.55□□□□□ -0.08
SCARB2-227ENST00000640957 LPCAT4Q643R3 524 aa14.55□□□□□ -0.08
SCARB2-227ENST00000640957 C16orf86Q6ZW13 317 aa14.55□□□□□ -0.08
SCARB2-227ENST00000640957 RHOT2Q8IXI1 618 aa14.55□□□□□ -0.08
SCARB2-227ENST00000640957 TMEM109Q9BVC6 243 aa14.55□□□□□ -0.08
SCARB2-227ENST00000640957 ANO3Q9BYT9 981 aa14.55□□□□□ -0.08
SCARB2-227ENST00000640957 RNASEH1O60930 286 aaKnown RBP14.55□□□□□ -0.08
SCARB2-227ENST00000640957 CFBP00751 764 aa14.55□□□□□ -0.08
SCARB2-227ENST00000640957 ATP2B4P23634 1241 aa14.55□□□□□ -0.08
SCARB2-227ENST00000640957 DYNLT1P63172 113 aa14.55□□□□□ -0.08
SCARB2-227ENST00000640957 ALCAMQ13740 583 aa14.55□□□□□ -0.08
SCARB2-227ENST00000640957 PAOXQ6QHF9 649 aa14.55□□□□□ -0.08
SCARB2-227ENST00000640957 ARHGAP27Q6ZUM4 889 aa14.55□□□□□ -0.08
SCARB2-227ENST00000640957 TRABD2AQ86V40 505 aa14.55□□□□□ -0.08
SCARB2-227ENST00000640957 SATL1Q86VE3 508 aa14.55□□□□□ -0.08
SCARB2-227ENST00000640957 FAM178BQ8IXR5 827 aa14.55□□□□□ -0.08
SCARB2-227ENST00000640957 EBF3Q9H4W6 596 aa14.55□□□□□ -0.08
SCARB2-227ENST00000640957 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.55□□□□□ -0.08
SCARB2-227ENST00000640957 CACNA1SQ13698 1873 aa14.55□□□□□ -0.08
SCARB2-227ENST00000640957 TMEM150BA6NC51 233 aa14.54□□□□□ -0.08
SCARB2-227ENST00000640957 MAGEB3O15480 346 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms