RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 Q9Y3F1 56 aa8.88□□□□□ -0.99
PNKP-231ENST00000640501 GOLGA6L10A6NI86 522 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 TMEM110-MUSTN1A8MSY1 372 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 GOLGA8KD6RF30 607 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 NDC80O14777 642 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 XPOTO43592 962 aaKnown RBP8.87□□□□□ -0.99
PNKP-231ENST00000640501 VNN1O95497 513 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 TFRCP02786 760 aaKnown RBP8.87□□□□□ -0.99
PNKP-231ENST00000640501 CYP1A1P04798 512 aaPredicted RBP8.87□□□□□ -0.99
PNKP-231ENST00000640501 PAEPP09466 180 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 UNGP13051 313 aaPredicted RBP8.87□□□□□ -0.99
PNKP-231ENST00000640501 ATF7P17544 494 aaPredicted RBP8.87□□□□□ -0.99
PNKP-231ENST00000640501 EIF4BP23588 611 aaKnown RBP8.87□□□□□ -0.99
PNKP-231ENST00000640501 OAS2P29728 719 aaKnown RBP8.87□□□□□ -0.99
PNKP-231ENST00000640501 AXLP30530 894 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 CTNNA1P35221 906 aaKnown RBP8.87□□□□□ -0.99
PNKP-231ENST00000640501 RGS2P41220 211 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 PLA2G4AP47712 749 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 AARSP49588 968 aaKnown RBP eCLIP8.87□□□□□ -0.99
PNKP-231ENST00000640501 CLCN3P51790 818 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 YARSP54577 528 aaKnown RBP8.87□□□□□ -0.99
PNKP-231ENST00000640501 LACTBP83111 547 aaPredicted RBP8.87□□□□□ -0.99
PNKP-231ENST00000640501 MYO1EQ12965 1108 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 MKRN3Q13064 507 aaKnown RBP8.87□□□□□ -0.99
PNKP-231ENST00000640501 MAP2K5Q13163 448 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 MKRN4PQ13434 485 aaPredicted RBP8.87□□□□□ -0.99
PNKP-231ENST00000640501 DRP2Q13474 957 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 HLTFQ14527 1009 aaKnown RBP eCLIP8.87□□□□□ -0.99
PNKP-231ENST00000640501 TAF1CQ15572 869 aaPredicted RBP8.87□□□□□ -0.99
PNKP-231ENST00000640501 LMBRD2Q68DH5 695 aaPredicted RBP8.87□□□□□ -0.99
PNKP-231ENST00000640501 PHF13Q86YI8 300 aaPredicted RBP8.87□□□□□ -0.99
PNKP-231ENST00000640501 KLHL7Q8IXQ5 586 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 MCOLN2Q8IZK6 566 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 AENQ8WTP8 325 aaKnown RBP8.87□□□□□ -0.99
PNKP-231ENST00000640501 GRK7Q8WTQ7 553 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 DDX1Q92499 740 aaKnown RBP8.87□□□□□ -0.99
PNKP-231ENST00000640501 COPS5Q92905 334 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 ARHGEF26Q96DR7 871 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 ACAP3Q96P50 834 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 MTMR12Q9C0I1 747 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 CDT1Q9H211 546 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 RNPEPQ9H4A4 650 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 PLEKHA5Q9HAU0 1116 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 CYP3A43Q9HB55 503 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 RRAGCQ9HB90 399 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 ZFYVE28Q9HCC9 887 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 EPB41L5Q9HCM4 733 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 PTPRHQ9HD43 1115 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 TAS2R14Q9NYV8 317 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 ADAM22Q9P0K1 906 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 WDR35Q9P2L0 1181 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 IP6K2Q9UHH9 426 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 ANAPC7Q9UJX3 599 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 ITGA11Q9UKX5 1188 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 KIAA1257Q9ULG3 409 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 DERAQ9Y315 318 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 C2CD2Q9Y426 696 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 PCDHA3Q9Y5H8 950 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.87□□□□□ -0.99
PNKP-231ENST00000640501 KAT6AQ92794 2004 aa8.87□□□□□ -0.99
PNKP-231ENST00000640501 A0A087WZ62 844 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 SMIM35A0A1B0GVV1 85 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 DDX3YO15523 660 aaKnown RBP8.86□□□□□ -0.99
PNKP-231ENST00000640501 SART1O43290 800 aaKnown RBP8.86□□□□□ -0.99
PNKP-231ENST00000640501 PSTPIP1O43586 416 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 FAM189A1O60320 539 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 PHF2O75151 1096 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 CAPN15O75808 1086 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 SNAI1O95863 264 aaPredicted RBP8.86□□□□□ -0.99
PNKP-231ENST00000640501 KRT19P08727 400 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 STAG3L1P0CL83 205 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 ACO1P21399 889 aaKnown RBP8.86□□□□□ -0.99
PNKP-231ENST00000640501 COMTP21964 271 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 RDXP35241 583 aaKnown RBP8.86□□□□□ -0.99
PNKP-231ENST00000640501 ZNF157P51786 506 aaPredicted RBP8.86□□□□□ -0.99
PNKP-231ENST00000640501 DR1Q01658 176 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 PTP4A2Q12974 167 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 TMEM132DQ14C87 1099 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 STILQ15468 1287 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 CFAP58Q5T655 872 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 OLFML2BQ68BL8 750 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 CHADLQ6NUI6 762 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 CEP128Q6ZU80 1094 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 SYDE1Q6ZW31 735 aaPredicted RBP8.86□□□□□ -0.99
PNKP-231ENST00000640501 SND1Q7KZF4 910 aaKnown RBP eCLIP8.86□□□□□ -0.99
PNKP-231ENST00000640501 CROCCP2Q86T23 111 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 RHOT1Q8IXI2 618 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 LINC01465Q8N7H1 131 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 OR5B17Q8NGF7 314 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 OLIG1Q8TAK6 271 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 TRAPPC12Q8WVT3 735 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 IFT81Q8WYA0 676 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 PCDHB18PQ96TA0 734 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 FDXACB1Q9BRP7 624 aaPredicted RBP8.86□□□□□ -0.99
PNKP-231ENST00000640501 C16orf70Q9BSU1 422 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 HAPLN2Q9GZV7 340 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 KATNBL1Q9H079 304 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 TSPYL1Q9H0U9 437 aa8.86□□□□□ -0.99
PNKP-231ENST00000640501 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.86□□□□□ -0.99
PNKP-231ENST00000640501 CISHQ9NSE2 258 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms