RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 TCP11L1Q9NUJ3 509 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 VPS54Q9P1Q0 977 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 WHRNQ9P202 907 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 NRBP1Q9UHY1 535 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 HPSEQ9Y251 543 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 PCDHB6Q9Y5E3 794 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 ATP6V1DQ9Y5K8 247 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 SLC12A7Q9Y666 1083 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 PMF1-BGLAPU3KQ54 211 aa6.84□□□□□ -1.31
ATM-229ENST00000639953 MKI67P46013 3256 aaKnown RBP6.84□□□□□ -1.32
ATM-229ENST00000639953 TNRC18O15417 2968 aaPredicted RBP6.84□□□□□ -1.32
ATM-229ENST00000639953 BAZ2BQ9UIF8 2168 aaKnown RBP6.84□□□□□ -1.32
ATM-229ENST00000639953 STK36Q9NRP7 1315 aa6.83□□□□□ -1.32
ATM-229ENST00000639953 TMEM232C9JQI7 657 aa6.83□□□□□ -1.32
ATM-229ENST00000639953 SPTLC2O15270 562 aa6.83□□□□□ -1.32
ATM-229ENST00000639953 CYTH3O43739 400 aa6.83□□□□□ -1.32
ATM-229ENST00000639953 SLC16A2P36021 539 aa6.83□□□□□ -1.32
ATM-229ENST00000639953 SLC1A4P43007 532 aa6.83□□□□□ -1.32
ATM-229ENST00000639953 GIPRP48546 466 aa6.83□□□□□ -1.32
ATM-229ENST00000639953 CORO7P57737 925 aa6.83□□□□□ -1.32
ATM-229ENST00000639953 NFKB2Q00653 900 aa6.83□□□□□ -1.32
ATM-229ENST00000639953 IKQ13123 557 aaPredicted RBP6.83□□□□□ -1.32
ATM-229ENST00000639953 PLS1Q14651 629 aa6.83□□□□□ -1.32
ATM-229ENST00000639953 TMEM132BQ14DG7 1078 aa6.83□□□□□ -1.32
ATM-229ENST00000639953 LBX2Q6XYB7 198 aa6.83□□□□□ -1.32
ATM-229ENST00000639953 TMTC3Q6ZXV5 915 aa6.83□□□□□ -1.32
ATM-229ENST00000639953 DHX40Q8IX18 779 aaKnown RBP6.83□□□□□ -1.32
ATM-229ENST00000639953 GRAMD1CQ8IYS0 662 aa6.83□□□□□ -1.32
ATM-229ENST00000639953 GPRC5AQ8NFJ5 357 aa6.83□□□□□ -1.32
ATM-229ENST00000639953 BICD2Q8TD16 824 aa6.83□□□□□ -1.32
ATM-229ENST00000639953 KLHL6Q8WZ60 621 aa6.83□□□□□ -1.32
ATM-229ENST00000639953 ANKS1AQ92625 1134 aa6.83□□□□□ -1.32
ATM-229ENST00000639953 ALG3Q92685 438 aa6.83□□□□□ -1.32
ATM-229ENST00000639953 ZNF396Q96N95 335 aaPredicted RBP6.83□□□□□ -1.32
ATM-229ENST00000639953 MED15Q96RN5 788 aa6.83□□□□□ -1.32
ATM-229ENST00000639953 HSD3B7Q9H2F3 369 aa6.83□□□□□ -1.32
ATM-229ENST00000639953 TNMDQ9H2S6 317 aa6.83□□□□□ -1.32
ATM-229ENST00000639953 MORF4L1Q9UBU8 362 aa6.83□□□□□ -1.32
ATM-229ENST00000639953 FBXO2Q9UK22 296 aaPredicted RBP6.83□□□□□ -1.32
ATM-229ENST00000639953 PTPN22Q9Y2R2 807 aa6.83□□□□□ -1.32
ATM-229ENST00000639953 RABGAP1Q9Y3P9 1069 aa6.83□□□□□ -1.32
ATM-229ENST00000639953 PTCH2Q9Y6C5 1203 aa6.83□□□□□ -1.32
ATM-229ENST00000639953 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.83□□□□□ -1.32
ATM-229ENST00000639953 SMCHD1A6NHR9 2005 aa6.83□□□□□ -1.32
ATM-229ENST00000639953 ZNFX1Q9P2E3 1918 aaKnown RBP6.82□□□□□ -1.32
ATM-229ENST00000639953 FAM237AA0A1B0GTK4 181 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 C2orf71A6NGG8 1288 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 VWA5AO00534 786 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 TNPO2O14787 897 aaKnown RBP6.82□□□□□ -1.32
ATM-229ENST00000639953 CPLX1O14810 134 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 PRPF3O43395 683 aaKnown RBP6.82□□□□□ -1.32
ATM-229ENST00000639953 MMP1P03956 469 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 GOLGA8HP0CJ92 632 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 PDHBP11177 359 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 TOP1P11387 765 aaKnown RBP6.82□□□□□ -1.32
ATM-229ENST00000639953 NCAM1P13591 858 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 PFKFB1P16118 471 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 ATP2B1P20020 1258 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 CASP1P29466 404 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 ME1P48163 572 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 SOX9P48436 509 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 SLC7A5Q01650 507 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 PRKCZQ05513 592 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 RTP5Q14D33 572 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 PPP2R5EQ16537 467 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 PTPN21Q16825 1174 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 CCDC96Q2M329 555 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 CCDC144BQ3MJ40 725 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 IFIT1BQ5T764 474 aaKnown RBP6.82□□□□□ -1.32
ATM-229ENST00000639953 WDR78Q5VTH9 848 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 ADALQ6DHV7 355 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 FRMD5Q7Z6J6 570 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 GGNQ86UU5 652 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 IQCA1Q86XH1 822 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 DGKHQ86XP1 1220 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 DIS3L2Q8IYB7 885 aaKnown RBP6.82□□□□□ -1.32
ATM-229ENST00000639953 C4orf32Q8N8J7 132 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 REPS2Q8NFH8 660 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 RASGRP4Q8TDF6 673 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 SH3TC2Q8TF17 1288 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 LRRC15Q8TF66 581 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 DCAF4Q8WV16 495 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 ABHD8Q96I13 439 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 NOX5Q96PH1 765 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 SLF1Q9BQI6 1058 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 UBAC1Q9BSL1 405 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 PHF20Q9BVI0 1012 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 MOV10L1Q9BXT6 1211 aaKnown RBP6.82□□□□□ -1.32
ATM-229ENST00000639953 UBA5Q9GZZ9 404 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 SPATC1LQ9H0A9 340 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 KAT14Q9H8E8 782 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 HOXC10Q9NYD6 342 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 GULP1Q9UBP9 304 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 SRRDQ9UH36 339 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 MAD2L2Q9UI95 211 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 FEM1BQ9UK73 627 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 PYCARDQ9ULZ3 195 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 ADAMTS5Q9UNA0 930 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 FAN1Q9Y2M0 1017 aa6.82□□□□□ -1.32
ATM-229ENST00000639953 MYPNQ86TC9 1320 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms