RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 EPC1Q9H2F5 836 aa13.28□□□□□ -0.28
CACNA1A-250ENST00000637809 C17orf75Q9HAS0 396 aa13.28□□□□□ -0.28
CACNA1A-250ENST00000637809 KMT5AQ9NQR1 393 aa13.28□□□□□ -0.28
CACNA1A-250ENST00000637809 CEP72Q9P209 647 aa13.28□□□□□ -0.28
CACNA1A-250ENST00000637809 DNM3Q9UQ16 869 aa13.28□□□□□ -0.28
CACNA1A-250ENST00000637809 RBM19Q9Y4C8 960 aaKnown RBP13.28□□□□□ -0.28
CACNA1A-250ENST00000637809 PCDHB6Q9Y5E3 794 aa13.28□□□□□ -0.28
CACNA1A-250ENST00000637809 NCANO14594 1321 aa13.28□□□□□ -0.28
CACNA1A-250ENST00000637809 MYH15Q9Y2K3 1946 aa13.27□□□□□ -0.28
CACNA1A-250ENST00000637809 H7C4K7 107 aa13.27□□□□□ -0.29
CACNA1A-250ENST00000637809 ZNF197O14709 1029 aa13.27□□□□□ -0.29
CACNA1A-250ENST00000637809 SLC16A4O15374 487 aa13.27□□□□□ -0.29
CACNA1A-250ENST00000637809 NCAM2O15394 837 aa13.27□□□□□ -0.29
CACNA1A-250ENST00000637809 CDC25AP30304 524 aa13.27□□□□□ -0.29
CACNA1A-250ENST00000637809 EPHA5P54756 1037 aa13.27□□□□□ -0.29
CACNA1A-250ENST00000637809 RSPO4Q2I0M5 234 aaPredicted RBP13.27□□□□□ -0.29
CACNA1A-250ENST00000637809 CTXN3Q4LDR2 81 aa13.27□□□□□ -0.29
CACNA1A-250ENST00000637809 VITQ6UXI7 678 aa13.27□□□□□ -0.29
CACNA1A-250ENST00000637809 PDZD4Q76G19 769 aaPredicted RBP13.27□□□□□ -0.29
CACNA1A-250ENST00000637809 DDX12PQ92771 950 aa13.27□□□□□ -0.29
CACNA1A-250ENST00000637809 DRC1Q96MC2 740 aa13.27□□□□□ -0.29
CACNA1A-250ENST00000637809 TBC1D32Q96NH3 1257 aa13.27□□□□□ -0.29
CACNA1A-250ENST00000637809 ZFP14Q9HCL3 533 aa13.27□□□□□ -0.29
CACNA1A-250ENST00000637809 TRPV5Q9NQA5 729 aa13.27□□□□□ -0.29
CACNA1A-250ENST00000637809 TUBGCP4Q9UGJ1 667 aa13.27□□□□□ -0.29
CACNA1A-250ENST00000637809 AFF4Q9UHB7 1163 aaKnown RBP13.27□□□□□ -0.29
CACNA1A-250ENST00000637809 NOL7Q9UMY1 257 aaKnown RBP13.27□□□□□ -0.29
CACNA1A-250ENST00000637809 SMG5Q9UPR3 1016 aaKnown RBP13.27□□□□□ -0.29
CACNA1A-250ENST00000637809 MRPS17Q9Y2R5 130 aaKnown RBP13.27□□□□□ -0.29
CACNA1A-250ENST00000637809 NUB1Q9Y5A7 615 aa13.27□□□□□ -0.29
CACNA1A-250ENST00000637809 STK24Q9Y6E0 443 aa13.27□□□□□ -0.29
CACNA1A-250ENST00000637809 SFI1A8K8P3 1242 aa13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 ARNTLO00327 626 aa13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 VNN2O95498 520 aa13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 HARSP12081 509 aaKnown RBP13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 TGM1P22735 817 aa13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 GUCY2CP25092 1073 aa13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 HMGN5P82970 282 aaKnown RBP13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 TWF1Q12792 350 aa13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 SEZ6Q53EL9 994 aa13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 KRT79Q5XKE5 535 aa13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 RNF19BQ6ZMZ0 732 aa13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 MAMSTRQ6ZN01 415 aa13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 FANCMQ8IYD8 2048 aa13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 TMEM161BQ8NDZ6 487 aa13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 BEST2Q8NFU1 509 aa13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 SPIRE2Q8WWL2 714 aa13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 SMARCD2Q92925 531 aa13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 TCHPQ9BT92 498 aa13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 TRMT61BQ9BVS5 477 aaKnown RBP13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 RAB34Q9BZG1 259 aa13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 HAPLN2Q9GZV7 340 aa13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 CHRDQ9H2X0 955 aa13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 BRD9Q9H8M2 597 aa13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 TRPV4Q9HBA0 871 aa13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 ZNF334Q9HCZ1 680 aaPredicted RBP13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 NCDNQ9UBB6 729 aa13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 MAFFQ9ULX9 164 aa13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 PCDHB8Q9UN66 801 aa13.26□□□□□ -0.29
CACNA1A-250ENST00000637809 MAN2B1O00754 1011 aa13.25□□□□□ -0.29
CACNA1A-250ENST00000637809 TOM1L1O75674 476 aa13.25□□□□□ -0.29
CACNA1A-250ENST00000637809 MAPTP10636 758 aaKnown RBP13.25□□□□□ -0.29
CACNA1A-250ENST00000637809 GJA1P17302 382 aa13.25□□□□□ -0.29
CACNA1A-250ENST00000637809 MCM4P33991 863 aa13.25□□□□□ -0.29
CACNA1A-250ENST00000637809 VIPR2P41587 438 aa13.25□□□□□ -0.29
CACNA1A-250ENST00000637809 MCL1Q07820 350 aa13.25□□□□□ -0.29
CACNA1A-250ENST00000637809 GNL2Q13823 731 aaKnown RBP13.25□□□□□ -0.29
CACNA1A-250ENST00000637809 NOLC1Q14978 699 aaKnown RBP eCLIP13.25□□□□□ -0.29
CACNA1A-250ENST00000637809 CYP4A22Q5TCH4 519 aa13.25□□□□□ -0.29
CACNA1A-250ENST00000637809 ZNF280DQ6N043 979 aa13.25□□□□□ -0.29
CACNA1A-250ENST00000637809 APPL2Q8NEU8 664 aa13.25□□□□□ -0.29
CACNA1A-250ENST00000637809 IRF7Q92985 503 aa13.25□□□□□ -0.29
CACNA1A-250ENST00000637809 TIPINQ9BVW5 301 aa13.25□□□□□ -0.29
CACNA1A-250ENST00000637809 LRRC3Q9BY71 257 aa13.25□□□□□ -0.29
CACNA1A-250ENST00000637809 FAM126AQ9BYI3 521 aaPredicted RBP13.25□□□□□ -0.29
CACNA1A-250ENST00000637809 ANKFY1Q9P2R3 1169 aa13.25□□□□□ -0.29
CACNA1A-250ENST00000637809 NDRG2Q9UN36 371 aaKnown RBP13.25□□□□□ -0.29
CACNA1A-250ENST00000637809 M0QZQ0 153 aa13.24□□□□□ -0.29
CACNA1A-250ENST00000637809 LAD1O00515 517 aa13.24□□□□□ -0.29
CACNA1A-250ENST00000637809 OAZ2O95190 189 aa13.24□□□□□ -0.29
CACNA1A-250ENST00000637809 CXCL8P10145 99 aa13.24□□□□□ -0.29
CACNA1A-250ENST00000637809 PLS3P13797 630 aa13.24□□□□□ -0.29
CACNA1A-250ENST00000637809 PSMC3P17980 439 aa13.24□□□□□ -0.29
CACNA1A-250ENST00000637809 LRPAP1P30533 357 aa13.24□□□□□ -0.29
CACNA1A-250ENST00000637809 GDI1P31150 447 aa13.24□□□□□ -0.29
CACNA1A-250ENST00000637809 PRPHP41219 470 aa13.24□□□□□ -0.29
CACNA1A-250ENST00000637809 AARSP49588 968 aaKnown RBP eCLIP13.24□□□□□ -0.29
CACNA1A-250ENST00000637809 TEAD2Q15562 447 aa13.24□□□□□ -0.29
CACNA1A-250ENST00000637809 ZBTB6Q15916 424 aa13.24□□□□□ -0.29
CACNA1A-250ENST00000637809 HYIQ5T013 277 aa13.24□□□□□ -0.29
CACNA1A-250ENST00000637809 IQCEQ6IPM2 695 aa13.24□□□□□ -0.29
CACNA1A-250ENST00000637809 ZPBP2Q6X784 338 aa13.24□□□□□ -0.29
CACNA1A-250ENST00000637809 TMC8Q8IU68 726 aa13.24□□□□□ -0.29
CACNA1A-250ENST00000637809 GPR161Q8N6U8 529 aaKnown RBP13.24□□□□□ -0.29
CACNA1A-250ENST00000637809 FAM184AQ8NB25 1140 aa13.24□□□□□ -0.29
CACNA1A-250ENST00000637809 LEMD2Q8NC56 503 aa13.24□□□□□ -0.29
CACNA1A-250ENST00000637809 SHKBP1Q8TBC3 707 aa13.24□□□□□ -0.29
CACNA1A-250ENST00000637809 ZSCAN18Q8TBC5 510 aaPredicted RBP13.24□□□□□ -0.29
CACNA1A-250ENST00000637809 DEPDC1BQ8WUY9 529 aa13.24□□□□□ -0.29
CACNA1A-250ENST00000637809 FAM3CQ92520 227 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms