RNA–Protein interactions for RNA: ENST00000636633.1

CACNA1D-216, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 4,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-216ENST00000636633 SCN11AQ9UI33 1791 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 GTPBP10A4D1E9 387 aaKnown RBP9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 FAM187AA6NFU0 413 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 ANKRD63C9JTQ0 380 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 BNIP3LO60238 219 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 ADCY3O60266 1144 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 SRGAP2BP0DMP2 458 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 CYP2C19P33261 490 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 ARL4CP56559 192 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 TBX2Q13207 712 aaPredicted RBP9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 ITGB3BPQ13352 177 aaPredicted RBP9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 SMTNL2Q2TAL5 461 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 FAM117BQ6P1L5 589 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 RAPH1Q70E73 1250 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 SLC47A2Q86VL8 602 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 VPS52Q8N1B4 723 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 RYBPQ8N488 228 aaPredicted RBP9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 SMC1BQ8NDV3 1235 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 DPP3Q9NY33 737 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 KBTBD13C9JR72 458 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 ARHGAP25P42331 645 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 PTGER2P43116 358 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 IL9RQ01113 521 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 KRT17Q04695 432 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 SEPT6Q14141 434 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 EFHC2Q5JST6 749 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 ACAD10Q6JQN1 1059 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 CCDC62Q6P9F0 684 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 GLB1LQ6UWU2 654 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 DLK2Q6UY11 383 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 LRRC55Q6ZSA7 311 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 DDX42Q86XP3 938 aaKnown RBP eCLIP9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 HOMEZQ8IX15 550 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 CYFIP2Q96F07 1278 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 OSBPL8Q9BZF1 889 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 DDX56Q9NY93 547 aaKnown RBP9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 FBXL5Q9UKA1 691 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 PRG3Q9Y2Y8 225 aaPredicted RBP9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 WDR91A4D1P6 747 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 B3GAT3O94766 335 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 MAPTP10636 758 aaKnown RBP9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 PDCLQ13371 301 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 STILQ15468 1287 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 TTC31Q49AM3 519 aaPredicted RBP9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 CBWD6Q4V339 395 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 CBWD3Q5JTY5 395 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 CBWD5Q5RIA9 395 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 C6orf118Q5T5N4 469 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 IZUMO3Q5VZ72 239 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 PCGF5Q86SE9 256 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 GSDMBQ8TAX9 411 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 SPATA20Q8TB22 786 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 RAB3IL1Q8TBN0 382 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 CGRRF1Q99675 332 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 CELF4Q9BZC1 486 aaKnown RBP9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 PRDM5Q9NQX1 630 aaPredicted RBP9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 LCMT1Q9UIC8 334 aa9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.52□□□□□ -0.89
CACNA1D-216ENST00000636633 PHRF1Q9P1Y6 1649 aaKnown RBP9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 ANKRD65E5RJM6 399 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 ARSEP51690 589 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 PMS2P54278 862 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 CDK17Q00537 523 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 HEATR6Q6AI08 1181 aaKnown RBP9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 RNF180Q86T96 592 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 ATL2Q8NHH9 583 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 ARHGEF2Q92974 986 aaKnown RBP9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 MCUR1Q96AQ8 359 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 PGBD4Q96DM1 585 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 L2HGDHQ9H9P8 463 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 VTA1Q9NP79 307 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 UBQLN1Q9UMX0 589 aaKnown RBP9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 MANSC4A6NHS7 340 aaPredicted RBP9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 TADA2AO75478 443 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 RRM1P23921 792 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 GNL1P36915 607 aaPredicted RBP9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 GARSP41250 739 aaKnown RBP9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 ADCY2Q08462 1091 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 DHX34Q14147 1143 aaKnown RBP9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 SMAD1Q15797 465 aaKnown RBP9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 GRIK4Q16099 956 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 PAN2Q504Q3 1202 aaKnown RBP9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 KIAA1755Q5JYT7 1200 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 SYCP2LQ5T4T6 812 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 BTBD8Q5XKL5 378 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 ZNF677Q86XU0 584 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 FEZF2Q8TBJ5 459 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 PPP4R1Q8TF05 950 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 MTMR8Q96EF0 704 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 IKZF4Q9H2S9 585 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 INTUQ9ULD6 942 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 KDM3BQ7LBC6 1761 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 HMGB1P1B2RPK0 211 aaPredicted RBP9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 RAD51CO43502 376 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 TRAPPC3O43617 180 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 PLA2G6O60733 806 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 CARSP49589 748 aaKnown RBP9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 EIF3EP60228 445 aaKnown RBP9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 MTM1Q13496 603 aa9.51□□□□□ -0.89
CACNA1D-216ENST00000636633 ACVR2BQ13705 512 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms