RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 CYP3A7-CYP3A51PA0A087WV96 503 aa15.36■□□□□ 0.05
SNX1-214ENST00000625244 FAM221BA6H8Z2 402 aa15.36■□□□□ 0.05
SNX1-214ENST00000625244 TMEM189-UBE2V1I3L0A0 370 aa15.36■□□□□ 0.05
SNX1-214ENST00000625244 KHNYNO15037 678 aaKnown RBP15.36■□□□□ 0.05
SNX1-214ENST00000625244 RECQL4O94761 1208 aa15.36■□□□□ 0.05
SNX1-214ENST00000625244 PRKCBP05771 671 aa15.36■□□□□ 0.05
SNX1-214ENST00000625244 CYP3A7P24462 503 aa15.36■□□□□ 0.05
SNX1-214ENST00000625244 YWHABP31946 246 aaKnown RBP15.36■□□□□ 0.05
SNX1-214ENST00000625244 IRX6P78412 446 aaPredicted RBP15.36■□□□□ 0.05
SNX1-214ENST00000625244 IRX4P78413 519 aa15.36■□□□□ 0.05
SNX1-214ENST00000625244 POU5F1BQ06416 359 aa15.36■□□□□ 0.05
SNX1-214ENST00000625244 TNK2Q07912 1038 aa15.36■□□□□ 0.05
SNX1-214ENST00000625244 TFDP1Q14186 410 aa15.36■□□□□ 0.05
SNX1-214ENST00000625244 IQCEQ6IPM2 695 aa15.36■□□□□ 0.05
SNX1-214ENST00000625244 ELMOD1Q8N336 334 aa15.36■□□□□ 0.05
SNX1-214ENST00000625244 BICD2Q8TD16 824 aa15.36■□□□□ 0.05
SNX1-214ENST00000625244 TBCKQ8TEA7 893 aa15.36■□□□□ 0.05
SNX1-214ENST00000625244 ZNF512Q96ME7 567 aaPredicted RBP15.36■□□□□ 0.05
SNX1-214ENST00000625244 ASAH2Q9NR71 780 aa15.36■□□□□ 0.05
SNX1-214ENST00000625244 ABCA7Q8IZY2 2146 aa15.35■□□□□ 0.05
SNX1-214ENST00000625244 EIF4E1BA6NMX2 242 aaKnown RBP15.35■□□□□ 0.05
SNX1-214ENST00000625244 TBX3O15119 743 aa15.35■□□□□ 0.05
SNX1-214ENST00000625244 SEC24BO95487 1268 aa15.35■□□□□ 0.05
SNX1-214ENST00000625244 P4HBP07237 508 aaKnown RBP15.35■□□□□ 0.05
SNX1-214ENST00000625244 BRCC3P46736 316 aa15.35■□□□□ 0.05
SNX1-214ENST00000625244 CLCNKBP51801 687 aa15.35■□□□□ 0.05
SNX1-214ENST00000625244 SIM1P81133 766 aaPredicted RBP15.35■□□□□ 0.05
SNX1-214ENST00000625244 TWF1Q12792 350 aa15.35■□□□□ 0.05
SNX1-214ENST00000625244 XKR9Q5GH70 373 aa15.35■□□□□ 0.05
SNX1-214ENST00000625244 CREB3L3Q68CJ9 461 aa15.35■□□□□ 0.05
SNX1-214ENST00000625244 ARID3BQ8IVW6 561 aaPredicted RBP15.35■□□□□ 0.05
SNX1-214ENST00000625244 CHCHD4Q8N4Q1 142 aa15.35■□□□□ 0.05
SNX1-214ENST00000625244 CAMKK1Q8N5S9 505 aa15.35■□□□□ 0.05
SNX1-214ENST00000625244 C3orf58Q8NDZ4 430 aa15.35■□□□□ 0.05
SNX1-214ENST00000625244 VAV3Q9UKW4 847 aa15.35■□□□□ 0.05
SNX1-214ENST00000625244 ATG2BQ96BY7 2078 aa15.35■□□□□ 0.05
SNX1-214ENST00000625244 KLF18A0A0U1RQI7 1052 aa15.34■□□□□ 0.05
SNX1-214ENST00000625244 TTLL13PA6NNM8 815 aa15.34■□□□□ 0.05
SNX1-214ENST00000625244 MEFVO15553 781 aaPredicted RBP15.34■□□□□ 0.05
SNX1-214ENST00000625244 DKC1O60832 514 aaKnown RBP eCLIP15.34■□□□□ 0.05
SNX1-214ENST00000625244 ATG13O75143 517 aa15.34■□□□□ 0.05
SNX1-214ENST00000625244 GLRA2P23416 452 aa15.34■□□□□ 0.05
SNX1-214ENST00000625244 ARL2P36404 184 aa15.34■□□□□ 0.05
SNX1-214ENST00000625244 SCAPQ12770 1279 aa15.34■□□□□ 0.05
SNX1-214ENST00000625244 UPP1Q16831 310 aa15.34■□□□□ 0.05
SNX1-214ENST00000625244 STXBP5Q5T5C0 1151 aa15.34■□□□□ 0.05
SNX1-214ENST00000625244 FSTL4Q6MZW2 842 aa15.34■□□□□ 0.05
SNX1-214ENST00000625244 C4orf19Q8IY42 314 aa15.34■□□□□ 0.05
SNX1-214ENST00000625244 LEMD2Q8NC56 503 aa15.34■□□□□ 0.05
SNX1-214ENST00000625244 TMEM209Q96SK2 561 aa15.34■□□□□ 0.05
SNX1-214ENST00000625244 LXNQ9BS40 222 aa15.34■□□□□ 0.05
SNX1-214ENST00000625244 MKNK1Q9BUB5 465 aa15.34■□□□□ 0.05
SNX1-214ENST00000625244 NFKBIZQ9BYH8 718 aa15.34■□□□□ 0.05
SNX1-214ENST00000625244 GPR88Q9GZN0 384 aa15.34■□□□□ 0.05
SNX1-214ENST00000625244 LSG1Q9H089 658 aaKnown RBP15.34■□□□□ 0.05
SNX1-214ENST00000625244 SLC32A1Q9H598 525 aa15.34■□□□□ 0.05
SNX1-214ENST00000625244 CACNA2D2Q9NY47 1150 aa15.34■□□□□ 0.05
SNX1-214ENST00000625244 A0A1W2PRU2 124 aa15.33■□□□□ 0.04
SNX1-214ENST00000625244 GBP1P32455 592 aa15.33■□□□□ 0.04
SNX1-214ENST00000625244 EXOSC10Q01780 885 aaKnown RBP15.33■□□□□ 0.04
SNX1-214ENST00000625244 CACNB1Q02641 598 aaPredicted RBP15.33■□□□□ 0.04
SNX1-214ENST00000625244 PPP2R5CQ13362 524 aa15.33■□□□□ 0.04
SNX1-214ENST00000625244 KARSQ15046 597 aaKnown RBP15.33■□□□□ 0.04
SNX1-214ENST00000625244 ARHGAP29Q52LW3 1261 aa15.33■□□□□ 0.04
SNX1-214ENST00000625244 GLRA4Q5JXX5 417 aa15.33■□□□□ 0.04
SNX1-214ENST00000625244 OTUD6AQ7L8S5 288 aa15.33■□□□□ 0.04
SNX1-214ENST00000625244 HNRNPLLQ8WVV9 542 aaKnown RBP15.33■□□□□ 0.04
SNX1-214ENST00000625244 LRRC3Q9BY71 257 aa15.33■□□□□ 0.04
SNX1-214ENST00000625244 SLKQ9H2G2 1235 aaPredicted RBP15.33■□□□□ 0.04
SNX1-214ENST00000625244 GOLGA2P5Q9HBQ8 144 aa15.33■□□□□ 0.04
SNX1-214ENST00000625244 RGL1Q9NZL6 768 aa15.33■□□□□ 0.04
SNX1-214ENST00000625244 VPS54Q9P1Q0 977 aa15.33■□□□□ 0.04
SNX1-214ENST00000625244 INVSQ9Y283 1065 aa15.33■□□□□ 0.04
SNX1-214ENST00000625244 NUP205Q92621 2012 aa15.33■□□□□ 0.04
SNX1-214ENST00000625244 PRPF3O43395 683 aaKnown RBP15.32■□□□□ 0.04
SNX1-214ENST00000625244 TRAPPC3O43617 180 aa15.32■□□□□ 0.04
SNX1-214ENST00000625244 RNF40O75150 1001 aa15.32■□□□□ 0.04
SNX1-214ENST00000625244 NECTIN1Q15223 517 aa15.32■□□□□ 0.04
SNX1-214ENST00000625244 TMEM196Q5HYL7 178 aa15.32■□□□□ 0.04
SNX1-214ENST00000625244 TPGS2Q68CL5 300 aa15.32■□□□□ 0.04
SNX1-214ENST00000625244 PMS2CLQ68D20 193 aa15.32■□□□□ 0.04
SNX1-214ENST00000625244 HAUS6Q7Z4H7 955 aa15.32■□□□□ 0.04
SNX1-214ENST00000625244 NOSTRINQ8IVI9 506 aa15.32■□□□□ 0.04
SNX1-214ENST00000625244 GLIS3Q8NEA6 775 aa15.32■□□□□ 0.04
SNX1-214ENST00000625244 PPP1R10Q96QC0 940 aaKnown RBP15.32■□□□□ 0.04
SNX1-214ENST00000625244 PDZD7Q9H5P4 517 aa15.32■□□□□ 0.04
SNX1-214ENST00000625244 FBXL5Q9UKA1 691 aa15.32■□□□□ 0.04
SNX1-214ENST00000625244 NAP1L2Q9ULW6 460 aaPredicted RBP15.32■□□□□ 0.04
SNX1-214ENST00000625244 ZNF462Q96JM2 2506 aa15.32■□□□□ 0.04
SNX1-214ENST00000625244 UNC79Q9P2D8 2635 aa15.31■□□□□ 0.04
SNX1-214ENST00000625244 SLC37A4O43826 429 aa15.31■□□□□ 0.04
SNX1-214ENST00000625244 EGFP01133 1207 aa15.31■□□□□ 0.04
SNX1-214ENST00000625244 MAPK8P45983 427 aa15.31■□□□□ 0.04
SNX1-214ENST00000625244 FAM193AP78312 1265 aa15.31■□□□□ 0.04
SNX1-214ENST00000625244 GRSF1Q12849 480 aaKnown RBP eCLIP15.31■□□□□ 0.04
SNX1-214ENST00000625244 MRPL58Q14197 206 aaKnown RBP15.31■□□□□ 0.04
SNX1-214ENST00000625244 CTTNQ14247 550 aaKnown RBP15.31■□□□□ 0.04
SNX1-214ENST00000625244 ITPRIPL2Q3MIP1 535 aa15.31■□□□□ 0.04
SNX1-214ENST00000625244 PPP4R3CPQ6ZMV5 832 aa15.31■□□□□ 0.04
SNX1-214ENST00000625244 CYP2U1Q7Z449 544 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms