RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 PCDHA13Q9Y5I0 950 aa4.94□□□□□ -1.62
ATRX-209ENST00000623242 SLC4A7Q9Y6M7 1214 aa4.94□□□□□ -1.62
ATRX-209ENST00000623242 DUSP10Q9Y6W6 482 aa4.94□□□□□ -1.62
ATRX-209ENST00000623242 CRB1P82279 1406 aa4.94□□□□□ -1.62
ATRX-209ENST00000623242 COL5A2P05997 1499 aaPredicted RBP4.94□□□□□ -1.62
ATRX-209ENST00000623242 COL22A1Q8NFW1 1626 aaPredicted RBP4.94□□□□□ -1.62
ATRX-209ENST00000623242 VSTM5A8MXK1 200 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 EXOC5O00471 708 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 B4GALT4O60513 344 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 VSIG10L2P0DP72 767 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 RIPK4P57078 832 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 BPIFB4P59827 614 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 SLFN5Q08AF3 891 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 GALEQ14376 348 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 VPS72Q15906 364 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 AMOTQ4VCS5 1084 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 CCDC181Q5TID7 509 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 ZKSCAN2Q63HK3 967 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 LCNL1Q6ZST4 164 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 ADGRE4PQ86SQ3 457 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 ANKRD53Q8N9V6 530 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.93□□□□□ -1.62
ATRX-209ENST00000623242 DIS3LQ8TF46 1054 aaKnown RBP4.93□□□□□ -1.62
ATRX-209ENST00000623242 LPPQ93052 612 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 MVB12AQ96EY5 273 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 RPL10LQ96L21 214 aaKnown RBP4.93□□□□□ -1.62
ATRX-209ENST00000623242 DMRTA2Q96SC8 542 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 ENKD1Q9H0I2 346 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 SLC6A15Q9H2J7 730 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 AGO3Q9H9G7 860 aaKnown RBP4.93□□□□□ -1.62
ATRX-209ENST00000623242 NMRK2Q9NPI5 230 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 OBP2AQ9NY56 170 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 TRPS1Q9UHF7 1281 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 LAS1LQ9Y4W2 734 aaKnown RBP4.93□□□□□ -1.62
ATRX-209ENST00000623242 PCDHB1Q9Y5F3 818 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 COL14A1Q05707 1796 aaKnown RBP4.93□□□□□ -1.62
ATRX-209ENST00000623242 IL16Q14005 1332 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 SPATA31A1Q5TZJ5 1347 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 IGSF1Q8N6C5 1336 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 KIF16BQ96L93 1317 aa4.93□□□□□ -1.62
ATRX-209ENST00000623242 CAMTA1Q9Y6Y1 1673 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 LTN1O94822 1766 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 A6NNZ2 444 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 MTSS1O43312 755 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 OFD1O75665 1012 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 MYBP10242 640 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 HSPA6P17066 643 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 SREBF1P36956 1147 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 WNT3AP56704 352 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 TBX4P57082 545 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 GJA9P57773 515 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 RBM6P78332 1123 aaKnown RBP4.92□□□□□ -1.62
ATRX-209ENST00000623242 KIAA2012Q0VF49 1180 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 BECN1Q14457 450 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 GRM3Q14832 879 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 CASC1Q6TDU7 716 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 NOL8Q76FK4 1167 aaKnown RBP4.92□□□□□ -1.62
ATRX-209ENST00000623242 SIAH1Q8IUQ4 282 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 MARCH10Q8NA82 808 aaPredicted RBP4.92□□□□□ -1.62
ATRX-209ENST00000623242 REPS2Q8NFH8 660 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 PPP1R35Q8TAP8 253 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 ZNF480Q8WV37 535 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 HDAC10Q969S8 669 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 PTPN18Q99952 460 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 PDCD2LQ9BRP1 358 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 LDAHQ9H6V9 325 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 JADE2Q9NQC1 790 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 GPRC5DQ9NZD1 345 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 GABBR1Q9UBS5 961 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 DDX19BQ9UMR2 479 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 NR2E1Q9Y466 385 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 COL3A1P02461 1466 aaPredicted RBP4.92□□□□□ -1.62
ATRX-209ENST00000623242 USP54Q70EL1 1684 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 SPATA31A5Q5VU36 1347 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 SPATA31A7Q8IWB4 1347 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 PCDH11XQ9BZA7 1347 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 PCDH11YQ9BZA8 1340 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 ABCC6O95255 1503 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 PEAK1Q9H792 1746 aa4.92□□□□□ -1.62
ATRX-209ENST00000623242 MAP2P11137 1827 aaKnown RBP4.91□□□□□ -1.62
ATRX-209ENST00000623242 FAM171A2A8MVW0 826 aa4.91□□□□□ -1.62
ATRX-209ENST00000623242 PHF2O75151 1096 aa4.91□□□□□ -1.62
ATRX-209ENST00000623242 ITGA10O75578 1167 aa4.91□□□□□ -1.62
ATRX-209ENST00000623242 AMY1AP04745 511 aa4.91□□□□□ -1.62
ATRX-209ENST00000623242 JUNP05412 331 aaKnown RBP4.91□□□□□ -1.62
ATRX-209ENST00000623242 HSP90AB1P08238 724 aaKnown RBP4.91□□□□□ -1.62
ATRX-209ENST00000623242 ECHS1P30084 290 aa4.91□□□□□ -1.62
ATRX-209ENST00000623242 GNALP38405 381 aa4.91□□□□□ -1.62
ATRX-209ENST00000623242 CASRP41180 1078 aa4.91□□□□□ -1.62
ATRX-209ENST00000623242 TMPOP42166 694 aaKnown RBP4.91□□□□□ -1.62
ATRX-209ENST00000623242 TEFQ10587 303 aa4.91□□□□□ -1.62
ATRX-209ENST00000623242 TARDBPQ13148 414 aaKnown RBP eCLIP4.91□□□□□ -1.62
ATRX-209ENST00000623242 DUSP8Q13202 625 aa4.91□□□□□ -1.62
ATRX-209ENST00000623242 MTHFSDQ2M296 383 aaKnown RBP4.91□□□□□ -1.62
ATRX-209ENST00000623242 GFOD2Q3B7J2 385 aa4.91□□□□□ -1.62
ATRX-209ENST00000623242 ALDH1L2Q3SY69 923 aa4.91□□□□□ -1.62
ATRX-209ENST00000623242 MINDY4Q4G0A6 757 aa4.91□□□□□ -1.62
ATRX-209ENST00000623242 GAGE13Q4V321 117 aa4.91□□□□□ -1.62
ATRX-209ENST00000623242 RHOT1Q8IXI2 618 aa4.91□□□□□ -1.62
ATRX-209ENST00000623242 GRAMD1CQ8IYS0 662 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms