RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-219	ENST00000622171	FOXQ1	Q9C009	403 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	SMG9	Q9H0W8	520 aa	Known RBP	4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	CRISPLD1	Q9H336	500 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	TMEM134	Q9H6X4	195 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	MRPL44	Q9H9J2	332 aa	Known RBP	4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	RPF1	Q9H9Y2	349 aa	Known RBP	4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	CYP4F11	Q9HBI6	524 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	UBN1	Q9NPG3	1134 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	TOPORS	Q9NS56	1045 aa	Predicted RBP	4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	CHST7	Q9NS84	486 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	CNTN3	Q9P232	1028 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	FBXW11	Q9UKB1	542 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	FBXL21	Q9UKT6	434 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	SLC27A5	Q9Y2P5	690 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	NR2E1	Q9Y466	385 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	NUMBL	Q9Y6R0	609 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	PTPRJ	Q12913	1337 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	GPR179	Q6PRD1	2367 aa		4.86	□□□□□ -1.63
LINC00649-219	ENST00000622171	EML5	Q05BV3	1969 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	FANCM	Q8IYD8	2048 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	MYO18A	Q92614	2054 aa	Known RBP	4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	SPAG17	Q6Q759	2223 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	DMXL1	Q9Y485	3027 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171		A0A1B0GVL5	298 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	PRR33	A8MZF0	331 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171		H0Y858	1186 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	PRRG1	O14668	218 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	SCAMP3	O14828	347 aa	Known RBP	4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	OGT	O15294	1046 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	POLR2D	O15514	142 aa	Known RBP	4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	PI15	O43692	258 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	GPR37L1	O60883	481 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	TOM1L1	O75674	476 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	ZMYND10	O75800	440 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	ADRB2	P07550	413 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	KRT19	P08727	400 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	ZSCAN22	P10073	491 aa	Predicted RBP	4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	MYL4	P12829	197 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	ALAD	P13716	330 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	HOXB8	P17481	243 aa	Predicted RBP	4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	PDC	P20941	246 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	MUT	P22033	750 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	FGFR3	P22607	806 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	RFX1	P22670	979 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	FSHR	P23945	695 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	ADSS	P30520	456 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	POLR2B	P30876	1174 aa	Known RBP	4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	HOXC13	P31276	330 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	TXLNA	P40222	546 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	CCR2	P41597	374 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	ME1	P48163	572 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	CASP4	P49662	377 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	CYP4F8	P98187	520 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	TFAM	Q00059	246 aa	Known RBP	4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	ITIH3	Q06033	890 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	MCL1	Q07820	350 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	ADCY1	Q08828	1119 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	TWF1	Q12792	350 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	BFSP1	Q12934	665 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	PLD1	Q13393	1074 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	MTMR3	Q13615	1198 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	CUL4B	Q13620	913 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	TMEM132D	Q14C87	1099 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	SLC39A14	Q15043	492 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	CWF19L1	Q69YN2	538 aa	Known RBP	4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	PARM1	Q6UWI2	310 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	ALKAL1	Q6UXT8	129 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	DSTYK	Q6XUX3	929 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	TMEM184A	Q6ZMB5	413 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	SCARA5	Q6ZMJ2	495 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	SV2B	Q7L1I2	683 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	ALYREF	Q86V81	257 aa	Known RBP	4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	MAP4K3	Q8IVH8	894 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	SUGP1	Q8IWZ8	645 aa	Known RBP	4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	SYCP3	Q8IZU3	236 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	TMEM105	Q8N8V8	129 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	RDH13	Q8NBN7	331 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	LINC00301	Q8NCQ3	95 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	OR10T2	Q8NGX3	314 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	GIPC2	Q8TF65	315 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	SPIRE2	Q8WWL2	714 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	PIK3R5	Q8WYR1	880 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	ERCC4	Q92889	916 aa	Predicted RBP	4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	ASIC4	Q96FT7	647 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	AK8	Q96MA6	479 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	SEPT5	Q99719	369 aa	Predicted RBP	4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	PYM1	Q9BRP8	204 aa	Known RBP	4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	PLA2G2F	Q9BZM2	168 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	MTMR12	Q9C0I1	747 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	MFSD1	Q9H3U5	465 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	KCNK12	Q9HB15	430 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	RXFP1	Q9HBX9	757 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	PDE11A	Q9HCR9	933 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	PANK4	Q9NVE7	773 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	LARS	Q9P2J5	1176 aa	Known RBP	4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	DNMT3B	Q9UBC3	853 aa	Known RBP	4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	MTRR	Q9UBK8	725 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	CCDC39	Q9UFE4	941 aa		4.85	□□□□□ -1.63
LINC00649-219	ENST00000622171	SERTAD1	Q9UHV2	236 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms