RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 USP33Q8TEY7 942 aa9.76□□□□□ -0.85
GGA3-223ENST00000621870 SH3BP1Q9Y3L3 701 aa9.76□□□□□ -0.85
GGA3-223ENST00000621870 CCDC78A2IDD5 438 aa9.76□□□□□ -0.85
GGA3-223ENST00000621870 EML1O00423 815 aa9.76□□□□□ -0.85
GGA3-223ENST00000621870 ATP9BO43861 1147 aa9.76□□□□□ -0.85
GGA3-223ENST00000621870 KPNA6O60684 536 aa9.76□□□□□ -0.85
GGA3-223ENST00000621870 AP1G2O75843 785 aa9.76□□□□□ -0.85
GGA3-223ENST00000621870 AKAP5P24588 427 aa9.76□□□□□ -0.85
GGA3-223ENST00000621870 ZNF720Q7Z2F6 126 aa9.76□□□□□ -0.85
GGA3-223ENST00000621870 ILDR1Q86SU0 546 aaPredicted RBP9.76□□□□□ -0.85
GGA3-223ENST00000621870 TADA2BQ86TJ2 420 aa9.76□□□□□ -0.85
GGA3-223ENST00000621870 C10orf67Q8IYJ2 551 aa9.76□□□□□ -0.85
GGA3-223ENST00000621870 MKL1Q969V6 931 aa9.76□□□□□ -0.85
GGA3-223ENST00000621870 OSBPL9Q96SU4 736 aa9.76□□□□□ -0.85
GGA3-223ENST00000621870 CYP39A1Q9NYL5 469 aa9.76□□□□□ -0.85
GGA3-223ENST00000621870 TSR3Q9UJK0 312 aaKnown RBP9.76□□□□□ -0.85
GGA3-223ENST00000621870 ASTN2O75129 1339 aaPredicted RBP9.75□□□□□ -0.85
GGA3-223ENST00000621870 SESN2P58004 480 aaPredicted RBP9.75□□□□□ -0.85
GGA3-223ENST00000621870 IL9RQ01113 521 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 MFSD10Q14728 455 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 IQSEC1Q6DN90 963 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 IL31Q6EBC2 164 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 OTOP1Q7RTM1 612 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 RIOX2Q8IUF8 465 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 CACNA2D3Q8IZS8 1091 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 PPM1NQ8N819 430 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 STKLD1Q8NE28 680 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 WDR18Q9BV38 432 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 RNF19AQ9NV58 838 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 ANO9A1A5B4 782 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 CCDC151A5D8V7 595 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 CYB561D2O14569 222 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 KRT37O76014 449 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 URODP06132 367 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 UBA1P22314 1058 aaKnown RBP9.75□□□□□ -0.85
GGA3-223ENST00000621870 FLT3LGP49771 235 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 BTG3Q14201 252 aaPredicted RBP9.75□□□□□ -0.85
GGA3-223ENST00000621870 TMEM132BQ14DG7 1078 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 Q4G0T1 1027 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 JADE1Q6IE81 842 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 ARHGAP24Q8N264 748 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 TAS1R2Q8TE23 839 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 ANKS1AQ92625 1134 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 RNPC3Q96LT9 517 aaKnown RBP9.75□□□□□ -0.85
GGA3-223ENST00000621870 DDIT4Q9NX09 232 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 EHD2Q9NZN4 543 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 NOVA2Q9UNW9 492 aaKnown RBP9.75□□□□□ -0.85
GGA3-223ENST00000621870 FAN1Q9Y2M0 1017 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 UBA6A0AVT1 1052 aaPredicted RBP9.75□□□□□ -0.85
GGA3-223ENST00000621870 PPP1R3GB7ZBB8 358 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 GOLGA8KD6RF30 607 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 SLITRK3O94933 977 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 ALDH2P05091 517 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 ODC1P11926 461 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 PAMP19021 973 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 PSEN2P49810 448 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 EIF3EP60228 445 aaKnown RBP9.75□□□□□ -0.85
GGA3-223ENST00000621870 ROR1Q01973 937 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 TAP1Q03518 808 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 MTM1Q13496 603 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 SMTNL2Q2TAL5 461 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 MMEL1Q495T6 779 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 CTXN3Q4LDR2 81 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 TRAPPC11Q7Z392 1133 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 C1orf131Q8NDD1 294 aaKnown RBP9.75□□□□□ -0.85
GGA3-223ENST00000621870 MMTAG2Q9BU76 263 aaKnown RBP9.75□□□□□ -0.85
GGA3-223ENST00000621870 MAGEB5Q9BZ81 275 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 WNT8AQ9H1J5 351 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 GOLPH3Q9H4A6 298 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 SNTG2Q9NY99 539 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 C3P01024 1663 aa9.75□□□□□ -0.85
GGA3-223ENST00000621870 F8W8V4 182 aa9.74□□□□□ -0.85
GGA3-223ENST00000621870 FOXN3O00409 490 aaPredicted RBP9.74□□□□□ -0.85
GGA3-223ENST00000621870 HOXA2O43364 376 aa9.74□□□□□ -0.85
GGA3-223ENST00000621870 AKAP3O75969 853 aa9.74□□□□□ -0.85
GGA3-223ENST00000621870 PAPOLAP51003 745 aaKnown RBP9.74□□□□□ -0.85
GGA3-223ENST00000621870 POU5F1BQ06416 359 aa9.74□□□□□ -0.85
GGA3-223ENST00000621870 GOLGA7BQ2TAP0 167 aa9.74□□□□□ -0.85
GGA3-223ENST00000621870 CYP4A22Q5TCH4 519 aa9.74□□□□□ -0.85
GGA3-223ENST00000621870 KLHDC7AQ5VTJ3 777 aa9.74□□□□□ -0.85
GGA3-223ENST00000621870 CCDC137Q6PK04 289 aaKnown RBP9.74□□□□□ -0.85
GGA3-223ENST00000621870 SV2AQ7L0J3 742 aa9.74□□□□□ -0.85
GGA3-223ENST00000621870 SLC35G2Q8TBE7 412 aa9.74□□□□□ -0.85
GGA3-223ENST00000621870 CAPS2Q9BXY5 557 aa9.74□□□□□ -0.85
GGA3-223ENST00000621870 VPS11Q9H270 941 aa9.74□□□□□ -0.85
GGA3-223ENST00000621870 ENTPD7Q9NQZ7 604 aa9.74□□□□□ -0.85
GGA3-223ENST00000621870 MYPNQ86TC9 1320 aa9.74□□□□□ -0.85
GGA3-223ENST00000621870 RIC1Q4ADV7 1423 aa9.74□□□□□ -0.85
GGA3-223ENST00000621870 SSU72P8A0A1W2PR75 194 aa9.74□□□□□ -0.85
GGA3-223ENST00000621870 USP27XA6NNY8 438 aa9.74□□□□□ -0.85
GGA3-223ENST00000621870 APRTP07741 180 aa9.74□□□□□ -0.85
GGA3-223ENST00000621870 KPNA2P52292 529 aaKnown RBP9.74□□□□□ -0.85
GGA3-223ENST00000621870 APBA1Q02410 837 aa9.74□□□□□ -0.85
GGA3-223ENST00000621870 MAPRE1Q15691 268 aaKnown RBP9.74□□□□□ -0.85
GGA3-223ENST00000621870 TAF1BQ53T94 588 aaPredicted RBP9.74□□□□□ -0.85
GGA3-223ENST00000621870 DDX50Q9BQ39 737 aaKnown RBP9.74□□□□□ -0.85
GGA3-223ENST00000621870 MED4Q9NPJ6 270 aa9.74□□□□□ -0.85
GGA3-223ENST00000621870 AMACRQ9UHK6 382 aa9.74□□□□□ -0.85
GGA3-223ENST00000621870 STK38LQ9Y2H1 464 aa9.74□□□□□ -0.85
GGA3-223ENST00000621870 TMEM88BA6NKF7 163 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms