RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 SLC38A10Q9HBR0 1119 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 SLC5A4Q9NY91 659 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 FAM53CQ9NYF3 392 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 PALM3A6NDB9 673 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 SLC26A4O43511 780 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 TNFRSF21O75509 655 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 CCDC130P13994 396 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 MTHFD1LQ6UB35 978 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 ZBTB33Q86T24 672 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 LIN28AQ9H9Z2 209 aaKnown RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 PIH1D1Q9NWS0 290 aaKnown RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 KIF24Q5T7B8 1368 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 PLEKHG1Q9ULL1 1385 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 A0A087X0T9 212 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 H0Y626 953 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 C21orf2O43822 256 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 NR3C1P04150 777 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 FAM228BP0C875 321 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 KLRC1P26715 233 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 ALDH1A3P47895 512 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 IST1P53990 364 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 GALCP54803 685 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 NR1H3Q13133 447 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 PTK7Q13308 1070 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 NCCRP1Q6ZVX7 275 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 GATAD2AQ86YP4 633 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 DNAAF3Q8N9W5 541 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 MAP3K14Q99558 947 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 EBF3Q9H4W6 596 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 PRDM16Q9HAZ2 1276 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 SHOX2O60902 331 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 HSPA8P11142 646 aaKnown RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 WLSQ5T9L3 541 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 CCSAPQ6IQ19 270 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 ZNF75CPQ92670 426 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 PABPC3Q9H361 631 aaKnown RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 LDHBP07195 334 aaKnown RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 ATF3P18847 181 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 SUN5Q8TC36 379 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 DEPDC7Q96QD5 511 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 PCDHA12Q9UN75 941 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 KIAA0586Q9BVV6 1533 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 AVPR1AP37288 418 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 USP33Q8TEY7 942 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 TATDN2Q93075 761 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 DGCR14Q96DF8 476 aaKnown RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 PPP1R16BQ96T49 567 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 UBE2OQ9C0C9 1292 aaKnown RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 MAP10Q9P2G4 905 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 COQ6Q9Y2Z9 468 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 MYO1GB0I1T2 1018 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 CCDC188H7C350 402 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 PODXLO00592 558 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 SLC5A3P53794 718 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 NKX1-1Q15270 411 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 CCDC149Q6ZUS6 474 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 BTBD10Q9BSF8 475 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 PLGRKTQ9HBL7 147 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 PPP1R1BQ9UD71 204 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 STX1BP61266 288 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 GRIK3Q13003 919 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 ARID3BQ8IVW6 561 aaPredicted RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 TLR10Q9BXR5 811 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 ENTPD7Q9NQZ7 604 aa5.29□□□□□ -1.56
VPS13D-214ENST00000620676 RSL24D1Q9UHA3 163 aaKnown RBP5.29□□□□□ -1.56
VPS13D-214ENST00000620676 ARHGAP31Q2M1Z3 1444 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 SNAP23O00161 211 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 PRPF3O43395 683 aaKnown RBP5.28□□□□□ -1.56
VPS13D-214ENST00000620676 POU5F1Q01860 360 aaKnown RBP5.28□□□□□ -1.56
VPS13D-214ENST00000620676 CNGA2Q16280 664 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 RGS21Q2M5E4 152 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 MICU2Q8IYU8 434 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 SLC20A1Q8WUM9 679 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 MCRS1Q96EZ8 462 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 EYA3Q99504 573 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 SLITRK6Q9H5Y7 841 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 GINS2Q9Y248 185 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 COMMD3-BMI1R4GMX3 469 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 IMPDH2P12268 514 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 PTPN4P29074 926 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 NSUN2Q08J23 767 aaKnown RBP eCLIP5.28□□□□□ -1.56
VPS13D-214ENST00000620676 TAGAPQ8N103 731 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 PGBD4Q96DM1 585 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 SGF29Q96ES7 293 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 COPS4Q9BT78 406 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 TRIM15Q9C019 465 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 COG4Q9H9E3 785 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 PCDHA4Q9UN74 947 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 WDR19Q8NEZ3 1342 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 USP17L5A8MUK1 530 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 PHF2O75151 1096 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 ENO2P09104 434 aaPredicted RBP5.28□□□□□ -1.56
VPS13D-214ENST00000620676 IL10P22301 178 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 DDI2Q5TDH0 399 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 CCDC134Q9H6E4 229 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 RHOBTB1O94844 696 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 CHKAP35790 457 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 HIF1AQ16665 826 aa5.28□□□□□ -1.56
VPS13D-214ENST00000620676 NARS2Q96I59 477 aaKnown RBP5.28□□□□□ -1.56
VPS13D-214ENST00000620676 YME1L1Q96TA2 773 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms