RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	TRPM4	Q8TD43	1214 aa		11.93	□□□□□ -0.5
TP53-223	ENST00000618944	RUNDC3B	Q96NL0	473 aa		11.93	□□□□□ -0.5
TP53-223	ENST00000618944	PRMT1	Q99873	361 aa	Known RBP	11.93	□□□□□ -0.5
TP53-223	ENST00000618944	TCHP	Q9BT92	498 aa		11.93	□□□□□ -0.5
TP53-223	ENST00000618944	PAGR1	Q9BTK6	254 aa		11.93	□□□□□ -0.5
TP53-223	ENST00000618944	DCLK3	Q9C098	648 aa		11.93	□□□□□ -0.5
TP53-223	ENST00000618944	AVEN	Q9NQS1	362 aa	Predicted RBP	11.93	□□□□□ -0.5
TP53-223	ENST00000618944	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
TP53-223	ENST00000618944	SRRM3	A6NNA2	597 aa	Predicted RBP	11.92	□□□□□ -0.5
TP53-223	ENST00000618944	PI4K2B	G5E9Z4	385 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	PROSC	O94903	275 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	PAEP	P09466	180 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	ARL2	P36404	184 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	TNFSF9	P41273	254 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	SLC1A1	P43005	524 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	MMP13	P45452	471 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	CENPC	Q03188	943 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	ADCY2	Q08462	1091 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	KYNU	Q16719	465 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	LIN9	Q5TKA1	542 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	KAZN	Q674X7	775 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	ZNF677	Q86XU0	584 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	ABRA	Q8N0Z2	381 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	RBBP8NL	Q8NC74	664 aa	Predicted RBP	11.92	□□□□□ -0.5
TP53-223	ENST00000618944	MGARP	Q8TDB4	240 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	KLRG1	Q96E93	195 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	CHMP6	Q96FZ7	201 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	ZNF668	Q96K58	619 aa	Predicted RBP	11.92	□□□□□ -0.5
TP53-223	ENST00000618944	MTFR1L	Q9H019	292 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	DHX33	Q9H6R0	707 aa	Known RBP	11.92	□□□□□ -0.5
TP53-223	ENST00000618944	STYXL1	Q9Y6J8	313 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944		A0A0B4J269	797 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	TLR3	O15455	904 aa	Known RBP	11.92	□□□□□ -0.5
TP53-223	ENST00000618944	MYBL1	P10243	752 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	CREB1	P16220	341 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	MARK3	P27448	753 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	NAMPT	P43490	491 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	NOP14	P78316	857 aa	Known RBP	11.92	□□□□□ -0.5
TP53-223	ENST00000618944	NCOA4	Q13772	614 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	LRRC14	Q15048	493 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	SPRED3	Q2MJR0	410 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	GKAP1	Q5VSY0	366 aa	Predicted RBP	11.92	□□□□□ -0.5
TP53-223	ENST00000618944	CCDC121	Q6ZUS5	278 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	CACNA2D3	Q8IZS8	1091 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	FAM81B	Q96LP2	452 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	C12orf42	Q96LP6	360 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	SCLT1	Q96NL6	688 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	FAM129A	Q9BZQ8	928 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	INTS9	Q9NV88	658 aa	Known RBP	11.92	□□□□□ -0.5
TP53-223	ENST00000618944	WHRN	Q9P202	907 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	CTNNAL1	Q9UBT7	734 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	ANAPC5	Q9UJX4	755 aa		11.92	□□□□□ -0.5
TP53-223	ENST00000618944	GOLGA6L7	A0A1B0GV03	622 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	AGT	P01019	485 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	CLTA	P09496	248 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	SRGAP2C	P0DJJ0	459 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	KRT10	P13645	584 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	TCF4	P15884	667 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	ITIH2	P19823	946 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	IVD	P26440	423 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	BAG6	P46379	1132 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	RPL7A	P62424	266 aa	Known RBP	11.91	□□□□□ -0.5
TP53-223	ENST00000618944	NOMO3	P69849	1222 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	TREML2	Q5T2D2	321 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	SLFN12L	Q6IEE8	588 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	ATL2	Q8NHH9	583 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	ATXN2L	Q8WWM7	1075 aa	Known RBP	11.91	□□□□□ -0.5
TP53-223	ENST00000618944	CNKSR2	Q8WXI2	1034 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	TRIM11	Q96F44	468 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	SNF8	Q96H20	258 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	PCYT2	Q99447	389 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	OSBPL7	Q9BZF2	842 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	AFG3L2	Q9Y4W6	797 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	FER1L6	Q2WGJ9	1857 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	GSTTP1	A0A1W2PQM5	241 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	ATG7	O95352	703 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	VIM	P08670	466 aa	Known RBP	11.91	□□□□□ -0.5
TP53-223	ENST00000618944	ATF2	P15336	505 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	CAPS	Q13938	189 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	GSTA5	Q7RTV2	222 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	YTHDF3	Q7Z739	585 aa	Known RBP	11.91	□□□□□ -0.5
TP53-223	ENST00000618944	EXOC3L1	Q86VI1	746 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	RHOT1	Q8IXI2	618 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	LRRC34	Q8IZ02	419 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	SLC16A10	Q8TF71	515 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	PRPF31	Q8WWY3	499 aa	Known RBP	11.91	□□□□□ -0.5
TP53-223	ENST00000618944	MLXIPL	Q9NP71	852 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	GGA3	Q9NZ52	723 aa		11.91	□□□□□ -0.5
TP53-223	ENST00000618944	CNTNAP2	Q9UHC6	1331 aa		11.9	□□□□□ -0.5
TP53-223	ENST00000618944	DNM1L	O00429	736 aa		11.9	□□□□□ -0.5
TP53-223	ENST00000618944	ATP2A1	O14983	1001 aa		11.9	□□□□□ -0.5
TP53-223	ENST00000618944	STAM2	O75886	525 aa		11.9	□□□□□ -0.5
TP53-223	ENST00000618944	POTEJ	P0CG39	1038 aa		11.9	□□□□□ -0.5
TP53-223	ENST00000618944	UBA1	P22314	1058 aa	Known RBP	11.9	□□□□□ -0.5
TP53-223	ENST00000618944	HNRNPH1	P31943	449 aa	Known RBP	11.9	□□□□□ -0.5
TP53-223	ENST00000618944	LY6K	Q17RY6	165 aa		11.9	□□□□□ -0.5
TP53-223	ENST00000618944	RHBDF2	Q6PJF5	856 aa		11.9	□□□□□ -0.5
TP53-223	ENST00000618944	TRMT10C	Q7L0Y3	403 aa	Known RBP	11.9	□□□□□ -0.5
TP53-223	ENST00000618944	TAX1BP1	Q86VP1	789 aa		11.9	□□□□□ -0.5
TP53-223	ENST00000618944	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms