RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 MKNK1Q9BUB5 465 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 SCNM1Q9BWG6 230 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 AGXT2Q9BYV1 514 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 SLC38A7Q9NVC3 462 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 HCFC1R1Q9NWW0 138 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 NDRG2Q9UN36 371 aaKnown RBP5.07□□□□□ -1.6
SNCA-213ENST00000618500 AXIN1O15169 862 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 ADAM12O43184 909 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 ZBTB43O43298 467 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 DGAT1O75907 488 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 HMGB1P09429 215 aaKnown RBP5.07□□□□□ -1.6
SNCA-213ENST00000618500 SPATA31D3P0C874 917 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 CCNE1P24864 410 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 TIE1P35590 1138 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 ROR1Q01973 937 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 BYSLQ13895 437 aaKnown RBP5.07□□□□□ -1.6
SNCA-213ENST00000618500 NECTIN1Q15223 517 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 LMBRD2Q68DH5 695 aaPredicted RBP5.07□□□□□ -1.6
SNCA-213ENST00000618500 CCNI2Q6ZMN8 369 aaPredicted RBP5.07□□□□□ -1.6
SNCA-213ENST00000618500 SPATA31D4Q6ZUB0 917 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 SHKBP1Q8TBC3 707 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 C2orf15Q8WU43 125 aaKnown RBP5.07□□□□□ -1.6
SNCA-213ENST00000618500 MCRS1Q96EZ8 462 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 LSG1Q9H089 658 aaKnown RBP5.07□□□□□ -1.6
SNCA-213ENST00000618500 ASAH2Q9NR71 780 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 SLC8A2Q9UPR5 921 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 SAMM50Q9Y512 469 aa5.07□□□□□ -1.6
SNCA-213ENST00000618500 RBM8AQ9Y5S9 174 aaKnown RBP5.07□□□□□ -1.6
SNCA-213ENST00000618500 CACNA1IQ9P0X4 2223 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 LNP1A1A4G5 178 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 DDX11L8A8MPP1 907 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 SLC27A2O14975 620 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 ZNF883P0CG24 379 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 GSPT1P15170 499 aaKnown RBP5.06□□□□□ -1.6
SNCA-213ENST00000618500 RPL17P18621 184 aaKnown RBP5.06□□□□□ -1.6
SNCA-213ENST00000618500 IBSPP21815 317 aaPredicted RBP5.06□□□□□ -1.6
SNCA-213ENST00000618500 AARSP49588 968 aaKnown RBP eCLIP5.06□□□□□ -1.6
SNCA-213ENST00000618500 CAPSQ13938 189 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 PDGFRLQ15198 375 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 ITPRIPL2Q3MIP1 535 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 FSTL4Q6MZW2 842 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 YAF2Q8IY57 180 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 ZSCAN18Q8TBC5 510 aaPredicted RBP5.06□□□□□ -1.6
SNCA-213ENST00000618500 PGBD1Q96JS3 809 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 SUSD3Q96L08 255 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 CNOT6LQ96LI5 555 aaKnown RBP5.06□□□□□ -1.6
SNCA-213ENST00000618500 PDZD7Q9H5P4 517 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 XPNPEP1Q9NQW7 623 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 THG1LQ9NWX6 298 aaKnown RBP5.06□□□□□ -1.6
SNCA-213ENST00000618500 PCDHGB2Q9Y5G2 931 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 TAF6LQ9Y6J9 622 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 CITO14578 2027 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 OR6C75A6NL08 312 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 F8W810 466 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 M0QZQ0 153 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 SEC24BO95487 1268 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 CD72P21854 359 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 OR1D2P34982 312 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 CCR2P41597 374 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 C19orf57Q0VDD7 668 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 SMARCB1Q12824 385 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 GRSF1Q12849 480 aaKnown RBP eCLIP5.06□□□□□ -1.6
SNCA-213ENST00000618500 GRM2Q14416 872 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 KRT32Q14532 448 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 CACTIN-AS1Q8N1I8 211 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 ZFP42Q96MM3 310 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 ZSWIM4Q9H7M6 989 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 RALYQ9UKM9 306 aaKnown RBP5.06□□□□□ -1.6
SNCA-213ENST00000618500 DNAH14Q0VDD8 3507 aa5.06□□□□□ -1.6
SNCA-213ENST00000618500 C4orf47A7E2U8 309 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 SNPHO15079 494 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 NPTXRO95502 500 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 CCDC192P0DO97 292 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 YWHABP31946 246 aaKnown RBP5.05□□□□□ -1.6
SNCA-213ENST00000618500 GRM5P41594 1212 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 SRSF5Q13243 272 aaKnown RBP5.05□□□□□ -1.6
SNCA-213ENST00000618500 JAKMIP3Q5VZ66 844 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 IQCEQ6IPM2 695 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 DHX32Q7L7V1 743 aaKnown RBP5.05□□□□□ -1.6
SNCA-213ENST00000618500 RNF149Q8NC42 400 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 RSPRY1Q96DX4 576 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 CEP295NLQ96MC4 621 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 ZNF512Q96ME7 567 aaPredicted RBP5.05□□□□□ -1.6
SNCA-213ENST00000618500 TMEM209Q96SK2 561 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 BMP2KQ9NSY1 1161 aaPredicted RBP5.05□□□□□ -1.6
SNCA-213ENST00000618500 CNTN3Q9P232 1028 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 PCDHA4Q9UN74 947 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 CDY1Q9Y6F8 540 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 SPAG17Q6Q759 2223 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 GOLGA8AA7E2F4 631 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 GOLGA8BA8MQT2 603 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 OAZ2O95190 189 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 SCP2P22307 547 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 ELF1P32519 619 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 KPNA1P52294 538 aaPredicted RBP5.05□□□□□ -1.6
SNCA-213ENST00000618500 ARHGAP15Q53QZ3 475 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 ZNF280DQ6N043 979 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 Q6ZS52 159 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 KRT25Q7Z3Z0 450 aa5.05□□□□□ -1.6
SNCA-213ENST00000618500 CYP2U1Q7Z449 544 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms