RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 CXCL16Q9H2A7 254 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 STARD7Q9NQZ5 370 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 SEPT11Q9NVA2 429 aaKnown RBP13.2□□□□□ -0.3
CBWD1-220ENST00000612045 WBP1LQ9NX94 342 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 DERAQ9Y315 318 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 RALGAPA2Q2PPJ7 1873 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 RECQL4O94761 1208 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 CHRNB2P17787 502 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 AKAP5P24588 427 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 NFX1Q12986 1120 aaKnown RBP13.2□□□□□ -0.3
CBWD1-220ENST00000612045 TRIM71Q2Q1W2 868 aaKnown RBP13.2□□□□□ -0.3
CBWD1-220ENST00000612045 TAF3Q5VWG9 929 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 PALB2Q86YC2 1186 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 ZMAT2Q96NC0 199 aaKnown RBP13.2□□□□□ -0.3
CBWD1-220ENST00000612045 APOL6Q9BWW8 343 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 DPP3Q9NY33 737 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 CNTN3Q9P232 1028 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 SALL4Q9UJQ4 1053 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 ITGA11Q9UKX5 1188 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 PHF24Q9UPV7 400 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 CNTN6Q9UQ52 1028 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 IPPQ9Y573 584 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 PCDHB4Q9Y5E5 795 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 ATP8B3O60423 1300 aa13.2□□□□□ -0.3
CBWD1-220ENST00000612045 TRIP11Q15643 1979 aa13.19□□□□□ -0.3
CBWD1-220ENST00000612045 A0A0U1RQG5 324 aaPredicted RBP13.19□□□□□ -0.3
CBWD1-220ENST00000612045 KBTBD13C9JR72 458 aa13.19□□□□□ -0.3
CBWD1-220ENST00000612045 GPR182O15218 404 aa13.19□□□□□ -0.3
CBWD1-220ENST00000612045 POLR2BP30876 1174 aaKnown RBP13.19□□□□□ -0.3
CBWD1-220ENST00000612045 ATICP31939 592 aa13.19□□□□□ -0.3
CBWD1-220ENST00000612045 GUCY2FP51841 1108 aa13.19□□□□□ -0.3
CBWD1-220ENST00000612045 BPIFB4P59827 614 aa13.19□□□□□ -0.3
CBWD1-220ENST00000612045 CDR2Q01850 454 aa13.19□□□□□ -0.3
CBWD1-220ENST00000612045 FBXO47Q5MNV8 452 aa13.19□□□□□ -0.3
CBWD1-220ENST00000612045 TMEM270Q6UE05 265 aa13.19□□□□□ -0.3
CBWD1-220ENST00000612045 DNAAF5Q86Y56 855 aa13.19□□□□□ -0.3
CBWD1-220ENST00000612045 RNF10Q8N5U6 811 aaKnown RBP13.19□□□□□ -0.3
CBWD1-220ENST00000612045 UBR7Q8N806 425 aa13.19□□□□□ -0.3
CBWD1-220ENST00000612045 SMG8Q8ND04 991 aaKnown RBP13.19□□□□□ -0.3
CBWD1-220ENST00000612045 DDX1Q92499 740 aaKnown RBP13.19□□□□□ -0.3
CBWD1-220ENST00000612045 TRPV6Q9H1D0 765 aa13.19□□□□□ -0.3
CBWD1-220ENST00000612045 PAK6Q9NQU5 681 aaPredicted RBP13.19□□□□□ -0.3
CBWD1-220ENST00000612045 CHST12Q9NRB3 414 aa13.19□□□□□ -0.3
CBWD1-220ENST00000612045 INTUQ9ULD6 942 aa13.19□□□□□ -0.3
CBWD1-220ENST00000612045 PCDHB2Q9Y5E7 798 aa13.19□□□□□ -0.3
CBWD1-220ENST00000612045 CTAGE9A4FU28 777 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 BTNL10A8MVZ5 291 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 TMCO5BA8MYB1 307 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 RIOK3O14730 519 aaKnown RBP13.18□□□□□ -0.3
CBWD1-220ENST00000612045 MMEP08473 750 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 H2AFZP0C0S5 128 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 ASPAP45381 313 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 RBP5P82980 135 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 FMO1Q01740 532 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 MTFR1Q15390 333 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 ZBTB6Q15916 424 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 H2AFVQ71UI9 128 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 FAXDC2Q96IV6 333 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 PCDHB18PQ96TA0 734 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 VRTNQ9H8Y1 702 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 AGO3Q9H9G7 860 aaKnown RBP13.18□□□□□ -0.3
CBWD1-220ENST00000612045 TAS2R14Q9NYV8 317 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 NXF1Q9UBU9 619 aaKnown RBP13.18□□□□□ -0.3
CBWD1-220ENST00000612045 PARP2Q9UGN5 583 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 AGAP1Q9UPQ3 857 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 ARVCFO00192 962 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 DNM1LO00429 736 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 CAND2O75155 1236 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 TACC1O75410 805 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 URI1O94763 535 aaPredicted RBP13.18□□□□□ -0.3
CBWD1-220ENST00000612045 MOCS3O95396 460 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 MYCP01106 439 aaPredicted RBP13.18□□□□□ -0.3
CBWD1-220ENST00000612045 CALCAP01258 141 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 ZNF132P52740 706 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 GALCP54803 685 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 WDR72Q3MJ13 1102 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 XKR4Q5GH76 650 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 ZNF667Q5HYK9 610 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 FAM26DQ5JW98 314 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 SCARA5Q6ZMJ2 495 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 ZNF677Q86XU0 584 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 RBBP8NLQ8NC74 664 aaPredicted RBP13.18□□□□□ -0.3
CBWD1-220ENST00000612045 TRIM58Q8NG06 486 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 HPDLQ96IR7 371 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 NOX5Q96PH1 765 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 NAPGQ99747 312 aaPredicted RBP13.18□□□□□ -0.3
CBWD1-220ENST00000612045 OSBPL7Q9BZF2 842 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 L2HGDHQ9H9P8 463 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 ERVK-5Q9HDB9 667 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 CISHQ9NSE2 258 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 PADI3Q9ULW8 664 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 POLIQ9UNA4 740 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 CAPN6Q9Y6Q1 641 aa13.18□□□□□ -0.3
CBWD1-220ENST00000612045 BUB1O43683 1085 aa13.17□□□□□ -0.3
CBWD1-220ENST00000612045 STAU1O95793 577 aaKnown RBP13.17□□□□□ -0.3
CBWD1-220ENST00000612045 WEE2P0C1S8 567 aa13.17□□□□□ -0.3
CBWD1-220ENST00000612045 GHRP10912 638 aa13.17□□□□□ -0.3
CBWD1-220ENST00000612045 GZMAP12544 262 aa13.17□□□□□ -0.3
CBWD1-220ENST00000612045 CD58P19256 250 aa13.17□□□□□ -0.3
CBWD1-220ENST00000612045 CD52P31358 61 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms