RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 ARHGEF1Q92888 912 aaKnown RBP9.61□□□□□ -0.87
COL25A1-208ENST00000610288 CEP19Q96LK0 163 aa9.61□□□□□ -0.87
COL25A1-208ENST00000610288 EHD4Q9H223 541 aa9.61□□□□□ -0.87
COL25A1-208ENST00000610288 VPS11Q9H270 941 aa9.61□□□□□ -0.87
COL25A1-208ENST00000610288 ALG13Q9NP73 1137 aaKnown RBP9.61□□□□□ -0.87
COL25A1-208ENST00000610288 ADA2Q9NZK5 511 aa9.61□□□□□ -0.87
COL25A1-208ENST00000610288 HAO1Q9UJM8 370 aa9.61□□□□□ -0.87
COL25A1-208ENST00000610288 DLC1Q96QB1 1528 aa9.61□□□□□ -0.87
COL25A1-208ENST00000610288 ESYT2A0FGR8 921 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 P4HA2O15460 535 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 COMTP21964 271 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 ITGA8P53708 1063 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 ALDH18A1P54886 795 aaKnown RBP9.6□□□□□ -0.87
COL25A1-208ENST00000610288 STX3Q13277 289 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 MAPRE2Q15555 327 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 ZNF667Q5HYK9 610 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 RC3H1Q5TC82 1133 aaKnown RBP9.6□□□□□ -0.87
COL25A1-208ENST00000610288 PATL1Q86TB9 770 aaKnown RBP9.6□□□□□ -0.87
COL25A1-208ENST00000610288 SIX6OS1Q8N1H7 587 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.6□□□□□ -0.87
COL25A1-208ENST00000610288 PLA2G12BQ9BX93 195 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 GOLPH3Q9H4A6 298 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 NGRNQ9NPE2 291 aaKnown RBP9.6□□□□□ -0.87
COL25A1-208ENST00000610288 GDF3Q9NR23 364 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 R3HDM2Q9Y2K5 976 aaKnown RBP9.6□□□□□ -0.87
COL25A1-208ENST00000610288 FIS1Q9Y3D6 152 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 A0A0G2JLW4 131 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 LRRC10BA6NIK2 292 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 SPAG6O75602 509 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 EYA4O95677 639 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 TBXAS1P24557 533 aaPredicted RBP9.6□□□□□ -0.87
COL25A1-208ENST00000610288 ELF3P78545 371 aaPredicted RBP9.6□□□□□ -0.87
COL25A1-208ENST00000610288 CENPCQ03188 943 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 TAP1Q03518 808 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 ZNF844Q08AG5 666 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 DCTN2Q13561 401 aaKnown RBP9.6□□□□□ -0.87
COL25A1-208ENST00000610288 CREG2Q8IUH2 290 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 TMCO5AQ8N6Q1 288 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 FBXO25Q8TCJ0 367 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 MAGEC3Q8TD91 643 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 EPS8L3Q8TE67 593 aaKnown RBP9.6□□□□□ -0.87
COL25A1-208ENST00000610288 HDAC7Q8WUI4 952 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 SLC10A4Q96EP9 437 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 SPATA17Q96L03 361 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 ACAP3Q96P50 834 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 MKNK1Q9BUB5 465 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 RAVER2Q9HCJ3 691 aaKnown RBP9.6□□□□□ -0.87
COL25A1-208ENST00000610288 KRT82Q9NSB4 513 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 TBC1D22BQ9NU19 505 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 CNTNAP5Q8WYK1 1306 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 ATXN2Q99700 1313 aaKnown RBP9.6□□□□□ -0.87
COL25A1-208ENST00000610288 FAM237AA0A1B0GTK4 181 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 GOLGA8RI6L899 631 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 IREB2P48200 963 aaKnown RBP9.6□□□□□ -0.87
COL25A1-208ENST00000610288 IL1RL1Q01638 556 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 KCNMA1Q12791 1236 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 MEA1Q16626 185 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 TRIM60Q495X7 471 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 SLC13A5Q86YT5 568 aaPredicted RBP9.6□□□□□ -0.87
COL25A1-208ENST00000610288 RCOR2Q8IZ40 523 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 CALML6Q8TD86 181 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 SKA2Q8WVK7 121 aaPredicted RBP9.6□□□□□ -0.87
COL25A1-208ENST00000610288 CMTM5Q96DZ9 223 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 LBHD1Q9BQE6 289 aaPredicted RBP9.6□□□□□ -0.87
COL25A1-208ENST00000610288 KBTBD4Q9NVX7 518 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 A0A0A6YYK5 440 aaPredicted RBP9.6□□□□□ -0.87
COL25A1-208ENST00000610288 H3BRJ5 948 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 LSM1O15116 133 aaKnown RBP9.6□□□□□ -0.87
COL25A1-208ENST00000610288 SLC16A4O15374 487 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 TAC1P20366 129 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 PTPN4P29074 926 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 KCNJ1P48048 391 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 NKX1-1Q15270 411 aaPredicted RBP9.6□□□□□ -0.87
COL25A1-208ENST00000610288 CDO1Q16878 200 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 SPDYCQ5MJ68 293 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 TSEN2Q8NCE0 465 aaKnown RBP9.6□□□□□ -0.87
COL25A1-208ENST00000610288 FBXL13Q8NEE6 735 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 HSPH1Q92598 858 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 MTRQ99707 1265 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 TLR10Q9BXR5 811 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 KLHL25Q9H0H3 589 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 MANSC1Q9H8J5 431 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 ASNSD1Q9NWL6 643 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 SH3GLB1Q9Y371 365 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 L3MBTL1Q9Y468 752 aa9.6□□□□□ -0.87
COL25A1-208ENST00000610288 GOLGA8CPA6NN73 597 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 GSTA4O15217 222 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 LCA5LO95447 670 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 SMARCA1P28370 1054 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 ADGRF4Q8IZF3 695 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 MREGQ8N565 214 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 PPP1R14BQ96C90 147 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 PGM2Q96G03 612 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 VPS39Q96JC1 886 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 FEM1BQ9UK73 627 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 NRXN1Q9ULB1 1477 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 ECE2O60344 883 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 ADRA2BP18089 450 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 HSPA13P48723 471 aa9.59□□□□□ -0.87
COL25A1-208ENST00000610288 EIF2B2P49770 351 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms