RNA–Protein interactions for RNA: ENST00000610149.1

CFTR-210, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

TSL 5

Gene CFTR, Length 519 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-210ENST00000610149 SNX33Q8WV41 574 aa4.35□□□□□ -1.71
CFTR-210ENST00000610149 ATXN2LQ8WWM7 1075 aaKnown RBP4.35□□□□□ -1.71
CFTR-210ENST00000610149 R3HDMLQ9H3Y0 253 aa4.35□□□□□ -1.71
CFTR-210ENST00000610149 GREM2Q9H772 168 aa4.35□□□□□ -1.71
CFTR-210ENST00000610149 DMRT3Q9NQL9 472 aa4.35□□□□□ -1.71
CFTR-210ENST00000610149 DIAPH3Q9NSV4 1193 aa4.35□□□□□ -1.71
CFTR-210ENST00000610149 DDX19BQ9UMR2 479 aa4.35□□□□□ -1.71
CFTR-210ENST00000610149 NOL7Q9UMY1 257 aaKnown RBP4.35□□□□□ -1.71
CFTR-210ENST00000610149 FZD1Q9UP38 647 aa4.35□□□□□ -1.71
CFTR-210ENST00000610149 COX11Q9Y6N1 276 aa4.35□□□□□ -1.71
CFTR-210ENST00000610149 GAPVD1Q14C86 1478 aa4.35□□□□□ -1.71
CFTR-210ENST00000610149 E9PCH4 1651 aa4.35□□□□□ -1.71
CFTR-210ENST00000610149 ITSN2Q9NZM3 1697 aa4.35□□□□□ -1.71
CFTR-210ENST00000610149 TRIM75PA6NK02 468 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 B5MCH6 92 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 APAF1O14727 1248 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 XPOTO43592 962 aaKnown RBP4.34□□□□□ -1.71
CFTR-210ENST00000610149 PCDHGA12O60330 932 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 ITGA10O75578 1167 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 RECQL4O94761 1208 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 ENDOD1O94919 500 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 CT47B1P0C2W7 299 aaPredicted RBP4.34□□□□□ -1.71
CFTR-210ENST00000610149 AGXTP21549 392 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 CRHR1P34998 444 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 PTPN7P35236 360 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 APBA1Q02410 837 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 MALLQ13021 153 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 PCBP2Q15366 365 aaKnown RBP eCLIP4.34□□□□□ -1.71
CFTR-210ENST00000610149 ATP2B3Q16720 1220 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 TIGD2Q4W5G0 525 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 DCAF17Q5H9S7 520 aaPredicted RBP4.34□□□□□ -1.71
CFTR-210ENST00000610149 RHOUQ7L0Q8 258 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 PNMA8AQ86V59 439 aaPredicted RBP4.34□□□□□ -1.71
CFTR-210ENST00000610149 ELOA2Q8IYF1 753 aaPredicted RBP4.34□□□□□ -1.71
CFTR-210ENST00000610149 PDCL2Q8N4E4 241 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 LILRA3Q8N6C8 439 aaPredicted RBP4.34□□□□□ -1.71
CFTR-210ENST00000610149 GPR156Q8NFN8 814 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 RIN2Q8WYP3 895 aaPredicted RBP4.34□□□□□ -1.71
CFTR-210ENST00000610149 FAXDC2Q96IV6 333 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 SMAD5Q99717 465 aaKnown RBP4.34□□□□□ -1.71
CFTR-210ENST00000610149 ASPSCR1Q9BZE9 553 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 ENKD1Q9H0I2 346 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 RBM12Q9NTZ6 932 aaKnown RBP4.34□□□□□ -1.71
CFTR-210ENST00000610149 GPRC5DQ9NZD1 345 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 SCOCQ9UIL1 159 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 DNM3Q9UQ16 869 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 PCDHGA9Q9Y5G4 932 aaKnown RBP4.34□□□□□ -1.71
CFTR-210ENST00000610149 PCDHGA8Q9Y5G5 932 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 PCDHGA7Q9Y5G6 932 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 PCDHGA6Q9Y5G7 932 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 PCDHGA3Q9Y5H0 932 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 PCDHGA2Q9Y5H1 932 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 GPR45Q9Y5Y3 372 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 USP19O94966 1318 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 TNKSO95271 1327 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 PIK3C2GO75747 1445 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 POLA1P09884 1462 aaPredicted RBP4.34□□□□□ -1.71
CFTR-210ENST00000610149 RAD54L2Q9Y4B4 1467 aa4.34□□□□□ -1.71
CFTR-210ENST00000610149 VIRMAQ69YN4 1812 aaKnown RBP4.34□□□□□ -1.71
CFTR-210ENST00000610149 ABCC2Q92887 1545 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 ADGRL2O95490 1459 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 NUP160Q12769 1436 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 GPRASP1Q5JY77 1395 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 PLEKHH1Q9ULM0 1364 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 KLHL33A6NCF5 533 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 FZD9O00144 591 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 HOXA3O43365 443 aaPredicted RBP4.33□□□□□ -1.72
CFTR-210ENST00000610149 RBP3P10745 1247 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 MGAT1P26572 445 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 ADSLP30566 484 aaPredicted RBP4.33□□□□□ -1.72
CFTR-210ENST00000610149 IGBP1P78318 339 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 MVPQ14764 893 aaKnown RBP4.33□□□□□ -1.72
CFTR-210ENST00000610149 NOMO1Q15155 1222 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 RABEP1Q15276 862 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 FAM214AQ32MH5 1076 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 CAVIN1Q6NZI2 390 aaKnown RBP4.33□□□□□ -1.72
CFTR-210ENST00000610149 MIGA2Q7L4E1 593 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 ITPRIPQ8IWB1 547 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 WDR63Q8IWG1 891 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 PPM1NQ8N819 430 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 SUPT20HQ8NEM7 779 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 MDGA1Q8NFP4 955 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 JADE3Q92613 823 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 NELL1Q92832 810 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 RUNDC1Q96C34 613 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 FUBP3Q96I24 572 aaKnown RBP eCLIP4.33□□□□□ -1.72
CFTR-210ENST00000610149 PDCD2LQ9BRP1 358 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 SENP6Q9GZR1 1112 aaPredicted RBP4.33□□□□□ -1.72
CFTR-210ENST00000610149 MANSC1Q9H8J5 431 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 SYNPO2LQ9H987 977 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 ZNF277Q9NRM2 450 aaPredicted RBP4.33□□□□□ -1.72
CFTR-210ENST00000610149 LANCL2Q9NS86 450 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 TMEM140Q9NV12 185 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 MOCS1Q9NZB8 636 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 EIF2B4Q9UI10 523 aaKnown RBP4.33□□□□□ -1.72
CFTR-210ENST00000610149 ZHX1Q9UKY1 873 aaPredicted RBP4.33□□□□□ -1.72
CFTR-210ENST00000610149 KIF3AQ9Y496 699 aa4.33□□□□□ -1.72
CFTR-210ENST00000610149 CDK13Q14004 1512 aaKnown RBP4.32□□□□□ -1.72
CFTR-210ENST00000610149 ASXL1Q8IXJ9 1541 aa4.32□□□□□ -1.72
CFTR-210ENST00000610149 TOPBP1Q92547 1522 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms