RNA–Protein interactions for RNA: ENST00000607388.1

RPF2-204, Transcript of ribosome production factor 2 homolog, humanhuman

TSL 1 (best)

Gene RPF2, Length 3,621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-204ENST00000607388 SNX3O60493 162 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 PPFIA2O75334 1257 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 AVILO75366 819 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 ENO1P06733 434 aaKnown RBP6.86□□□□□ -1.31
RPF2-204ENST00000607388 GJB1P08034 283 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 ADRA1DP25100 572 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 MAN1A1P33908 653 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 RPA3P35244 121 aaPredicted RBP6.86□□□□□ -1.31
RPF2-204ENST00000607388 ABCG1P45844 678 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 RAP1GAPP47736 663 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 RGS7P49802 495 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 NLRP11P59045 1033 aaKnown RBP6.86□□□□□ -1.31
RPF2-204ENST00000607388 STRN3Q13033 797 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 BIRC2Q13490 618 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 BMPR2Q13873 1038 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 PCNX4Q63HM2 1172 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 KRT39Q6A163 491 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 TXNRD3NBQ6F5E7 133 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 CAPRIN2Q6IMN6 1127 aaKnown RBP6.86□□□□□ -1.31
RPF2-204ENST00000607388 LRIG3Q6UXM1 1119 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 ZCCHC23Q6ZST2 131 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 ARHGEF18Q6ZSZ5 1173 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 LRRC71Q8N4P6 559 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 DEPTORQ8TB45 409 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 AKT1S1Q96B36 256 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 CALR3Q96L12 384 aaKnown RBP6.86□□□□□ -1.31
RPF2-204ENST00000607388 APOL6Q9BWW8 343 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 MYLK2Q9H1R3 596 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 ZNF395Q9H8N7 513 aaPredicted RBP6.86□□□□□ -1.31
RPF2-204ENST00000607388 NGRNQ9NPE2 291 aaKnown RBP6.86□□□□□ -1.31
RPF2-204ENST00000607388 PPARGC1AQ9UBK2 798 aaKnown RBP6.86□□□□□ -1.31
RPF2-204ENST00000607388 UMODL1Q5DID0 1318 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 INO80B-WBP1J3KQ70 363 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 ATP2A1O14983 1001 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 VCAM1P19320 739 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 CDH8P55286 799 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 COPS2P61201 443 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 AP3B2Q13367 1082 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 CFAP157Q5JU67 520 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 LIN9Q5TKA1 542 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 SESTD1Q86VW0 696 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 LRRC6Q86X45 466 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 LENG9Q96B70 501 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 SNF8Q96H20 258 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 FAM161BQ96MY7 647 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 INO80BQ9C086 356 aaPredicted RBP6.86□□□□□ -1.31
RPF2-204ENST00000607388 EHMT1Q9H9B1 1298 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.86□□□□□ -1.31
RPF2-204ENST00000607388 NINJ2Q9NZG7 142 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 GRHL1Q9NZI5 618 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 DLGAP2Q9P1A6 1054 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 GTF3C4Q9UKN8 822 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 PHTF1Q9UMS5 762 aa6.86□□□□□ -1.31
RPF2-204ENST00000607388 MYH14Q7Z406 1995 aaKnown RBP6.86□□□□□ -1.31
RPF2-204ENST00000607388 NUP98P52948 1817 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 NID2Q14112 1375 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 CITO14578 2027 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 CASZ1Q86V15 1759 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 TOM1L1O75674 476 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 STK10O94804 968 aaKnown RBP6.85□□□□□ -1.31
RPF2-204ENST00000607388 AGTP01019 485 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 PECAM1P16284 738 aaPredicted RBP6.85□□□□□ -1.31
RPF2-204ENST00000607388 ATP2A2P16615 1042 aaKnown RBP6.85□□□□□ -1.31
RPF2-204ENST00000607388 SREBF1P36956 1147 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 PHKA2P46019 1235 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 NCALDP61601 193 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 FMO1Q01740 532 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 ITIH3Q06033 890 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 TFDP1Q14186 410 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 TAF1BQ53T94 588 aaPredicted RBP6.85□□□□□ -1.31
RPF2-204ENST00000607388 MFSD7Q6UXD7 560 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 RINLQ6ZS11 566 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 C3orf62Q6ZUJ4 267 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 SIAH1Q8IUQ4 282 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 USP6NLQ92738 828 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 RUNDC3BQ96NL0 473 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 FAM111AQ96PZ2 611 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 SMYD2Q9NRG4 433 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 IL1RAPL1Q9NZN1 696 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 COL20A1Q9P218 1284 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 PARP2Q9UGN5 583 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 ZFP69BQ9UJL9 534 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 SLC4A7Q9Y6M7 1214 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 PITPNM2Q9BZ72 1349 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 K7ERI5 159 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 SOCS7O14512 581 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 RASSF9O75901 435 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 FAM155BO75949 473 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 NPTX2P47972 431 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 RARRES1P49788 294 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 ALDH18A1P54886 795 aaKnown RBP6.85□□□□□ -1.31
RPF2-204ENST00000607388 GABPAQ06546 454 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 SPIRE1Q08AE8 756 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 DHX34Q14147 1143 aaKnown RBP6.85□□□□□ -1.31
RPF2-204ENST00000607388 Q3C1V9 767 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 DNAJC24Q6P3W2 148 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 DAW1Q8N136 415 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 POU5F2Q8N7G0 328 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 FAM71DQ8N9W8 422 aa6.85□□□□□ -1.31
RPF2-204ENST00000607388 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms