RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 POLR3CQ9BUI4 534 aaPredicted RBP16.46■□□□□ 0.23
SSBP4-214ENST00000607020 C8orf33Q9H7E9 229 aaPredicted RBP16.46■□□□□ 0.23
SSBP4-214ENST00000607020 SLC38A7Q9NVC3 462 aa16.46■□□□□ 0.23
SSBP4-214ENST00000607020 AFF4Q9UHB7 1163 aaKnown RBP16.46■□□□□ 0.23
SSBP4-214ENST00000607020 FBXL5Q9UKA1 691 aa16.46■□□□□ 0.23
SSBP4-214ENST00000607020 ANGPTL2Q9UKU9 493 aa16.46■□□□□ 0.23
SSBP4-214ENST00000607020 USP20Q9Y2K6 914 aa16.46■□□□□ 0.23
SSBP4-214ENST00000607020 TDRD15B5MCY1 1934 aaKnown RBP16.45■□□□□ 0.22
SSBP4-214ENST00000607020 RPL9P32969 192 aaKnown RBP16.45■□□□□ 0.22
SSBP4-214ENST00000607020 KRT2P35908 639 aa16.45■□□□□ 0.22
SSBP4-214ENST00000607020 SOX4Q06945 474 aaPredicted RBP16.45■□□□□ 0.22
SSBP4-214ENST00000607020 DMWDQ09019 674 aa16.45■□□□□ 0.22
SSBP4-214ENST00000607020 DGKKQ5KSL6 1271 aa16.45■□□□□ 0.22
SSBP4-214ENST00000607020 ATF7IP2Q5U623 682 aa16.45■□□□□ 0.22
SSBP4-214ENST00000607020 PADI6Q6TGC4 694 aa16.45■□□□□ 0.22
SSBP4-214ENST00000607020 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.45■□□□□ 0.22
SSBP4-214ENST00000607020 ZSCAN18Q8TBC5 510 aaPredicted RBP16.45■□□□□ 0.22
SSBP4-214ENST00000607020 WASF1Q92558 559 aa16.45■□□□□ 0.22
SSBP4-214ENST00000607020 GOLGA2P5Q9HBQ8 144 aa16.45■□□□□ 0.22
SSBP4-214ENST00000607020 PDRG1Q9NUG6 133 aa16.45■□□□□ 0.22
SSBP4-214ENST00000607020 CEP72Q9P209 647 aa16.45■□□□□ 0.22
SSBP4-214ENST00000607020 TNFSF13BQ9Y275 285 aa16.45■□□□□ 0.22
SSBP4-214ENST00000607020 HEPACAM2A8MVW5 462 aa16.44■□□□□ 0.22
SSBP4-214ENST00000607020 PODXLO00592 558 aa16.44■□□□□ 0.22
SSBP4-214ENST00000607020 CHADO15335 359 aa16.44■□□□□ 0.22
SSBP4-214ENST00000607020 NEMFO60524 1076 aa16.44■□□□□ 0.22
SSBP4-214ENST00000607020 PFKFB2O60825 505 aa16.44■□□□□ 0.22
SSBP4-214ENST00000607020 KCNE1P15382 129 aa16.44■□□□□ 0.22
SSBP4-214ENST00000607020 GRM5P41594 1212 aa16.44■□□□□ 0.22
SSBP4-214ENST00000607020 FCHO2Q0JRZ9 810 aa16.44■□□□□ 0.22
SSBP4-214ENST00000607020 WDR5BQ86VZ2 330 aa16.44■□□□□ 0.22
SSBP4-214ENST00000607020 HS6ST3Q8IZP7 471 aa16.44■□□□□ 0.22
SSBP4-214ENST00000607020 FAM160A2Q8N612 972 aaPredicted RBP16.44■□□□□ 0.22
SSBP4-214ENST00000607020 LOXL4Q96JB6 756 aa16.44■□□□□ 0.22
SSBP4-214ENST00000607020 BRMS1Q9HCU9 246 aa16.44■□□□□ 0.22
SSBP4-214ENST00000607020 TOPORSQ9NS56 1045 aaPredicted RBP16.44■□□□□ 0.22
SSBP4-214ENST00000607020 ORC3Q9UBD5 711 aaPredicted RBP16.44■□□□□ 0.22
SSBP4-214ENST00000607020 CNOT1A5YKK6 2376 aaKnown RBP16.43■□□□□ 0.22
SSBP4-214ENST00000607020 MYBPHLA2RUH7 354 aa16.43■□□□□ 0.22
SSBP4-214ENST00000607020 MED24O75448 989 aa16.43■□□□□ 0.22
SSBP4-214ENST00000607020 CTDNEP1O95476 244 aa16.43■□□□□ 0.22
SSBP4-214ENST00000607020 MUTP22033 750 aa16.43■□□□□ 0.22
SSBP4-214ENST00000607020 RPA1P27694 616 aa16.43■□□□□ 0.22
SSBP4-214ENST00000607020 YARSP54577 528 aaKnown RBP16.43■□□□□ 0.22
SSBP4-214ENST00000607020 ARPP19P56211 112 aa16.43■□□□□ 0.22
SSBP4-214ENST00000607020 SRSF5Q13243 272 aaKnown RBP16.43■□□□□ 0.22
SSBP4-214ENST00000607020 N4BP2L1Q5TBK1 243 aaPredicted RBP16.43■□□□□ 0.22
SSBP4-214ENST00000607020 IL31Q6EBC2 164 aa16.43■□□□□ 0.22
SSBP4-214ENST00000607020 RALGPS2Q86X27 583 aaPredicted RBP16.43■□□□□ 0.22
SSBP4-214ENST00000607020 SYNPOQ8N3V7 929 aa16.43■□□□□ 0.22
SSBP4-214ENST00000607020 CSGALNACT1Q8TDX6 532 aa16.43■□□□□ 0.22
SSBP4-214ENST00000607020 SUSD3Q96L08 255 aa16.43■□□□□ 0.22
SSBP4-214ENST00000607020 PTPRHQ9HD43 1115 aa16.43■□□□□ 0.22
SSBP4-214ENST00000607020 ASAH2Q9NR71 780 aa16.43■□□□□ 0.22
SSBP4-214ENST00000607020 NCANO14594 1321 aa16.43■□□□□ 0.22
SSBP4-214ENST00000607020 WNT7AO00755 349 aa16.42■□□□□ 0.22
SSBP4-214ENST00000607020 ZNF806P0C7X5 589 aa16.42■□□□□ 0.22
SSBP4-214ENST00000607020 FDPSP14324 419 aaKnown RBP16.42■□□□□ 0.22
SSBP4-214ENST00000607020 LIG1P18858 919 aa16.42■□□□□ 0.22
SSBP4-214ENST00000607020 TWF1Q12792 350 aa16.42■□□□□ 0.22
SSBP4-214ENST00000607020 CTXN3Q4LDR2 81 aa16.42■□□□□ 0.22
SSBP4-214ENST00000607020 WDR44Q5JSH3 913 aa16.42■□□□□ 0.22
SSBP4-214ENST00000607020 APPL2Q8NEU8 664 aa16.42■□□□□ 0.22
SSBP4-214ENST00000607020 BEST2Q8NFU1 509 aa16.42■□□□□ 0.22
SSBP4-214ENST00000607020 SHKBP1Q8TBC3 707 aa16.42■□□□□ 0.22
SSBP4-214ENST00000607020 KIFAP3Q92845 792 aa16.42■□□□□ 0.22
SSBP4-214ENST00000607020 IFT74Q96LB3 600 aa16.42■□□□□ 0.22
SSBP4-214ENST00000607020 ZMAT2Q96NC0 199 aaKnown RBP16.42■□□□□ 0.22
SSBP4-214ENST00000607020 CCDC94Q9BW85 323 aaPredicted RBP16.42■□□□□ 0.22
SSBP4-214ENST00000607020 LRRC3Q9BY71 257 aa16.42■□□□□ 0.22
SSBP4-214ENST00000607020 CCDC163A0A0D9SF12 145 aa16.41■□□□□ 0.22
SSBP4-214ENST00000607020 ARHGEF35A5YM69 484 aa16.41■□□□□ 0.22
SSBP4-214ENST00000607020 K7ERI5 159 aa16.41■□□□□ 0.22
SSBP4-214ENST00000607020 MYL4P12829 197 aa16.41■□□□□ 0.22
SSBP4-214ENST00000607020 KPNA1P52294 538 aaPredicted RBP16.41■□□□□ 0.22
SSBP4-214ENST00000607020 TEAD2Q15562 447 aa16.41■□□□□ 0.22
SSBP4-214ENST00000607020 ZNF280DQ6N043 979 aa16.41■□□□□ 0.22
SSBP4-214ENST00000607020 CEP68Q76N32 757 aa16.41■□□□□ 0.22
SSBP4-214ENST00000607020 YAF2Q8IY57 180 aa16.41■□□□□ 0.22
SSBP4-214ENST00000607020 RSPRY1Q96DX4 576 aa16.41■□□□□ 0.22
SSBP4-214ENST00000607020 ACO2Q99798 780 aaKnown RBP16.41■□□□□ 0.22
SSBP4-214ENST00000607020 OXCT2Q9BYC2 517 aaPredicted RBP16.41■□□□□ 0.22
SSBP4-214ENST00000607020 CDT1Q9H211 546 aa16.41■□□□□ 0.22
SSBP4-214ENST00000607020 TMEM60Q9H2L4 133 aa16.41■□□□□ 0.22
SSBP4-214ENST00000607020 RBM12Q9NTZ6 932 aaKnown RBP16.41■□□□□ 0.22
SSBP4-214ENST00000607020 OBP2AQ9NY56 170 aa16.41■□□□□ 0.22
SSBP4-214ENST00000607020 CNTN3Q9P232 1028 aa16.41■□□□□ 0.22
SSBP4-214ENST00000607020 TPCN1Q9ULQ1 816 aa16.41■□□□□ 0.22
SSBP4-214ENST00000607020 NUB1Q9Y5A7 615 aa16.41■□□□□ 0.22
SSBP4-214ENST00000607020 BTBD18B2RXH4 712 aa16.4■□□□□ 0.22
SSBP4-214ENST00000607020 SPECC1L-ADORA2AF8WAN1 911 aa16.4■□□□□ 0.22
SSBP4-214ENST00000607020 GJA1P17302 382 aa16.4■□□□□ 0.22
SSBP4-214ENST00000607020 WEE1P30291 646 aa16.4■□□□□ 0.22
SSBP4-214ENST00000607020 CTHP32929 405 aa16.4■□□□□ 0.22
SSBP4-214ENST00000607020 RAP1GAPP47736 663 aa16.4■□□□□ 0.22
SSBP4-214ENST00000607020 CCINQ13939 588 aa16.4■□□□□ 0.22
SSBP4-214ENST00000607020 TXNDC11Q6PKC3 985 aa16.4■□□□□ 0.22
SSBP4-214ENST00000607020 Q6ZS52 159 aa16.4■□□□□ 0.22
SSBP4-214ENST00000607020 CEP120Q8N960 986 aa16.4■□□□□ 0.22
SSBP4-214ENST00000607020 DDX12PQ92771 950 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms