RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 FAM13AO94988 1023 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 OAZ2O95190 189 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 BMP15O95972 392 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 PIGRP01833 764 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 LRG1P02750 347 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 ADRB2P07550 413 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 DCNP07585 359 aaKnown RBP8.3□□□□□ -1.08
CUX1-219ENST00000606749 PLCG1P19174 1290 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 CYP3A5P20815 502 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 SCP2P22307 547 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 RFX1P22670 979 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 MARCKSP29966 332 aaPredicted RBP8.3□□□□□ -1.08
CUX1-219ENST00000606749 LRPAP1P30533 357 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 MCM4P33991 863 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 DDIT3P35638 169 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 LIG4P49917 911 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 ADCY1Q08828 1119 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 SNW1Q13573 536 aaKnown RBP8.3□□□□□ -1.08
CUX1-219ENST00000606749 CUL4AQ13619 759 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 KARSQ15046 597 aaKnown RBP8.3□□□□□ -1.08
CUX1-219ENST00000606749 KYAT1Q16773 422 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 SLC44A4Q53GD3 710 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 ZBTB41Q5SVQ8 909 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 RNF19BQ6ZMZ0 732 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 ING5Q8WYH8 240 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 RAD54LQ92698 747 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 KIF12Q96FN5 646 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 SHDQ96IW2 340 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 TSPAN18Q96SJ8 248 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 FIZ1Q96SL8 496 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 KXD1Q9BQD3 176 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 PLA2G2FQ9BZM2 168 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 CCSER1Q9C0I3 900 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 RPF1Q9H9Y2 349 aaKnown RBP8.3□□□□□ -1.08
CUX1-219ENST00000606749 PARVGQ9HBI0 331 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 CYP4F11Q9HBI6 524 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 GDE1Q9NZC3 331 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 MAFFQ9ULX9 164 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 PCDHB8Q9UN66 801 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 CFAP54Q96N23 3096 aa8.3□□□□□ -1.08
CUX1-219ENST00000606749 CITO14578 2027 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 PRR23AA6NEV1 266 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 K7ENM7 598 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 ZNF197O14709 1029 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 HNRNPDLO14979 420 aaKnown RBP8.29□□□□□ -1.08
CUX1-219ENST00000606749 OGTO15294 1046 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 ECI2O75521 394 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 MICAL2O94851 1124 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 GLULP15104 373 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 CEBPBP17676 345 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 NMT1P30419 496 aaKnown RBP8.29□□□□□ -1.08
CUX1-219ENST00000606749 AARSP49588 968 aaKnown RBP eCLIP8.29□□□□□ -1.08
CUX1-219ENST00000606749 GTF2BQ00403 316 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 PFKPQ01813 784 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 YWHAHQ04917 246 aaPredicted RBP8.29□□□□□ -1.08
CUX1-219ENST00000606749 PPP2R3AQ06190 1150 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 PTPAQ15257 358 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 ENOX2Q16206 610 aaKnown RBP8.29□□□□□ -1.08
CUX1-219ENST00000606749 PRSS36Q5K4E3 855 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 SPECC1Q5M775 1068 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 TANGO2Q6ICL3 276 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 ZNF280DQ6N043 979 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 SLC39A4Q6P5W5 647 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 USP49Q70CQ1 688 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 C1orf210Q8IVY1 113 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 HS6ST3Q8IZP7 471 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 BEST2Q8NFU1 509 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 PJA1Q8NG27 643 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 NKD2Q969F2 451 aaPredicted RBP8.29□□□□□ -1.08
CUX1-219ENST00000606749 TCEAL4Q96EI5 215 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 EPSTI1Q96J88 318 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 ZNF512Q96ME7 567 aaPredicted RBP8.29□□□□□ -1.08
CUX1-219ENST00000606749 CORO1BQ9BR76 489 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 DDX23Q9BUQ8 820 aaKnown RBP8.29□□□□□ -1.08
CUX1-219ENST00000606749 FOXQ1Q9C009 403 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 ZHX3Q9H4I2 956 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 CEP72Q9P209 647 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 AFF4Q9UHB7 1163 aaKnown RBP8.29□□□□□ -1.08
CUX1-219ENST00000606749 UBQLN1Q9UMX0 589 aaKnown RBP8.29□□□□□ -1.08
CUX1-219ENST00000606749 MTF2Q9Y483 593 aaPredicted RBP8.29□□□□□ -1.08
CUX1-219ENST00000606749 TIMM13Q9Y5L4 95 aaPredicted RBP8.29□□□□□ -1.08
CUX1-219ENST00000606749 INSL5Q9Y5Q6 135 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.29□□□□□ -1.08
CUX1-219ENST00000606749 CLIC4Q9Y696 253 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 MYH11P35749 1972 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 CACNA1HO95180 2353 aa8.29□□□□□ -1.08
CUX1-219ENST00000606749 KANSL1LA0AUZ9 987 aa8.28□□□□□ -1.08
CUX1-219ENST00000606749 VPS37CA5D8V6 355 aaPredicted RBP8.28□□□□□ -1.08
CUX1-219ENST00000606749 FAM170BA6NMN3 283 aa8.28□□□□□ -1.08
CUX1-219ENST00000606749 ANKRD63C9JTQ0 380 aa8.28□□□□□ -1.08
CUX1-219ENST00000606749 NRG2O14511 850 aaPredicted RBP8.28□□□□□ -1.08
CUX1-219ENST00000606749 XPOTO43592 962 aaKnown RBP8.28□□□□□ -1.08
CUX1-219ENST00000606749 LRRN2O75325 713 aa8.28□□□□□ -1.08
CUX1-219ENST00000606749 VNN2O95498 520 aa8.28□□□□□ -1.08
CUX1-219ENST00000606749 KRT18P05783 430 aaKnown RBP8.28□□□□□ -1.08
CUX1-219ENST00000606749 CCR2P41597 374 aa8.28□□□□□ -1.08
CUX1-219ENST00000606749 GUCY2FP51841 1108 aa8.28□□□□□ -1.08
CUX1-219ENST00000606749 LILRA4P59901 499 aa8.28□□□□□ -1.08
CUX1-219ENST00000606749 PRKCQQ04759 706 aa8.28□□□□□ -1.08
CUX1-219ENST00000606749 TWF1Q12792 350 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms