RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 BACE2Q9Y5Z0 518 aa13.36□□□□□ -0.27
CTSA-210ENST00000606000 KMT2EQ8IZD2 1858 aa13.36□□□□□ -0.27
CTSA-210ENST00000606000 BDP1A6H8Y1 2624 aa13.35□□□□□ -0.27
CTSA-210ENST00000606000 WDR27A2RRH5 827 aa13.35□□□□□ -0.27
CTSA-210ENST00000606000 GOLGA8IPA6NC78 632 aa13.35□□□□□ -0.27
CTSA-210ENST00000606000 GOLGA8JA6NMD2 632 aa13.35□□□□□ -0.27
CTSA-210ENST00000606000 TULP1O00294 542 aaPredicted RBP13.35□□□□□ -0.27
CTSA-210ENST00000606000 SPTLC1O15269 473 aa13.35□□□□□ -0.27
CTSA-210ENST00000606000 TBC1D4O60343 1298 aa13.35□□□□□ -0.27
CTSA-210ENST00000606000 PAPLNO95428 1278 aa13.35□□□□□ -0.27
CTSA-210ENST00000606000 ABCD1P33897 745 aa13.35□□□□□ -0.27
CTSA-210ENST00000606000 KYAT1Q16773 422 aa13.35□□□□□ -0.27
CTSA-210ENST00000606000 PPM1LQ5SGD2 360 aa13.35□□□□□ -0.27
CTSA-210ENST00000606000 LIN9Q5TKA1 542 aa13.35□□□□□ -0.27
CTSA-210ENST00000606000 SPATA1Q5VX52 437 aa13.35□□□□□ -0.27
CTSA-210ENST00000606000 SCARA3Q6AZY7 606 aa13.35□□□□□ -0.27
CTSA-210ENST00000606000 PDXDC1Q6P996 788 aa13.35□□□□□ -0.27
CTSA-210ENST00000606000 TRIM67Q6ZTA4 783 aa13.35□□□□□ -0.27
CTSA-210ENST00000606000 GET4Q7L5D6 327 aaPredicted RBP13.35□□□□□ -0.27
CTSA-210ENST00000606000 CCDC65Q8IXS2 484 aa13.35□□□□□ -0.27
CTSA-210ENST00000606000 ZDHHC14Q8IZN3 488 aa13.35□□□□□ -0.27
CTSA-210ENST00000606000 MYADMQ96S97 322 aa13.35□□□□□ -0.27
CTSA-210ENST00000606000 CBWD1Q9BRT8 395 aa13.35□□□□□ -0.27
CTSA-210ENST00000606000 FAM213AQ9BRX8 229 aa13.35□□□□□ -0.27
CTSA-210ENST00000606000 PCIF1Q9H4Z3 704 aa13.35□□□□□ -0.27
CTSA-210ENST00000606000 HCFC1R1Q9NWW0 138 aa13.35□□□□□ -0.27
CTSA-210ENST00000606000 DPP7Q9UHL4 492 aa13.35□□□□□ -0.27
CTSA-210ENST00000606000 FBXL5Q9UKA1 691 aa13.35□□□□□ -0.27
CTSA-210ENST00000606000 RCOR1Q9UKL0 485 aa13.35□□□□□ -0.27
CTSA-210ENST00000606000 DOCK6Q96HP0 2047 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 TMEM221A6NGB7 291 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 M0R296 226 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 SYN3O14994 580 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 PDGFBP01127 241 aaPredicted RBP13.34□□□□□ -0.27
CTSA-210ENST00000606000 OR4Q2P0C623 313 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 PDIA4P13667 645 aaKnown RBP13.34□□□□□ -0.27
CTSA-210ENST00000606000 CYP3A5P20815 502 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 GBP2P32456 591 aaPredicted RBP13.34□□□□□ -0.27
CTSA-210ENST00000606000 HOXD13P35453 343 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 AFMP43652 599 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 AARSP49588 968 aaKnown RBP eCLIP13.34□□□□□ -0.27
CTSA-210ENST00000606000 CUL4BQ13620 913 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 MRPL58Q14197 206 aaKnown RBP13.34□□□□□ -0.27
CTSA-210ENST00000606000 TMEM132DQ14C87 1099 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 CTXN3Q4LDR2 81 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 C9orf57Q5W0N0 161 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 SLFN12LQ6IEE8 588 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 SLC8B1Q6J4K2 584 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 ELMSAN1Q6PJG2 1045 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 GRASPQ7Z6J2 395 aaPredicted RBP13.34□□□□□ -0.27
CTSA-210ENST00000606000 SYCP3Q8IZU3 236 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 IQUBQ8NA54 791 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 NOC3LQ8WTT2 800 aaKnown RBP13.34□□□□□ -0.27
CTSA-210ENST00000606000 LEO1Q8WVC0 666 aaPredicted RBP13.34□□□□□ -0.27
CTSA-210ENST00000606000 RSAD2Q8WXG1 361 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 ASIC4Q96FT7 647 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 CUEDC2Q9H467 287 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 FAM13BQ9NYF5 915 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 SERTAD1Q9UHV2 236 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 CFAP45Q9UL16 551 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 PCDHB8Q9UN66 801 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 POLIQ9UNA4 740 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 EXOC7Q9UPT5 735 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 USTQ9Y2C2 406 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 TCHHQ07283 1943 aa13.34□□□□□ -0.27
CTSA-210ENST00000606000 TECTAO75443 2155 aa13.33□□□□□ -0.28
CTSA-210ENST00000606000 M0QZQ0 153 aa13.33□□□□□ -0.28
CTSA-210ENST00000606000 SEC24AO95486 1093 aa13.33□□□□□ -0.28
CTSA-210ENST00000606000 C1RP00736 705 aa13.33□□□□□ -0.28
CTSA-210ENST00000606000 CDR1P51861 262 aa13.33□□□□□ -0.28
CTSA-210ENST00000606000 ATL3Q6DD88 541 aa13.33□□□□□ -0.28
CTSA-210ENST00000606000 ZNF280DQ6N043 979 aa13.33□□□□□ -0.28
CTSA-210ENST00000606000 OTOP3Q7RTS5 596 aa13.33□□□□□ -0.28
CTSA-210ENST00000606000 BEST2Q8NFU1 509 aa13.33□□□□□ -0.28
CTSA-210ENST00000606000 C7orf25Q9BPX7 421 aa13.33□□□□□ -0.28
CTSA-210ENST00000606000 RHOBTB2Q9BYZ6 727 aa13.33□□□□□ -0.28
CTSA-210ENST00000606000 SORCS3Q9UPU3 1222 aa13.33□□□□□ -0.28
CTSA-210ENST00000606000 PCDHB13Q9Y5F0 798 aa13.33□□□□□ -0.28
CTSA-210ENST00000606000 SCN1AP35498 2009 aa13.33□□□□□ -0.28
CTSA-210ENST00000606000 NOTCH4Q99466 2003 aa13.33□□□□□ -0.28
CTSA-210ENST00000606000 DOCK8Q8NF50 2099 aa13.32□□□□□ -0.28
CTSA-210ENST00000606000 A0A1B0GVL5 298 aa13.32□□□□□ -0.28
CTSA-210ENST00000606000 PIRO00625 290 aa13.32□□□□□ -0.28
CTSA-210ENST00000606000 XPOTO43592 962 aaKnown RBP13.32□□□□□ -0.28
CTSA-210ENST00000606000 ACTN4O43707 911 aaKnown RBP13.32□□□□□ -0.28
CTSA-210ENST00000606000 HNRNPA1P09651 372 aaKnown RBP eCLIP13.32□□□□□ -0.28
CTSA-210ENST00000606000 PFKFB1P16118 471 aa13.32□□□□□ -0.28
CTSA-210ENST00000606000 LILRA4P59901 499 aa13.32□□□□□ -0.28
CTSA-210ENST00000606000 EHHADHQ08426 723 aa13.32□□□□□ -0.28
CTSA-210ENST00000606000 SIGLEC14Q08ET2 396 aa13.32□□□□□ -0.28
CTSA-210ENST00000606000 MTMR3Q13615 1198 aa13.32□□□□□ -0.28
CTSA-210ENST00000606000 ALCAMQ13740 583 aa13.32□□□□□ -0.28
CTSA-210ENST00000606000 FAM26FQ5R3K3 315 aa13.32□□□□□ -0.28
CTSA-210ENST00000606000 ARMCX5Q6P1M9 558 aa13.32□□□□□ -0.28
CTSA-210ENST00000606000 CYP26C1Q6V0L0 522 aa13.32□□□□□ -0.28
CTSA-210ENST00000606000 DSTYKQ6XUX3 929 aa13.32□□□□□ -0.28
CTSA-210ENST00000606000 RNF19BQ6ZMZ0 732 aa13.32□□□□□ -0.28
CTSA-210ENST00000606000 EPM2AIP1Q7L775 607 aaPredicted RBP13.32□□□□□ -0.28
CTSA-210ENST00000606000 BRSK2Q8IWQ3 736 aa13.32□□□□□ -0.28
CTSA-210ENST00000606000 CD302Q8IX05 232 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms