RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 EXTL3O43909 919 aa12.52□□□□□ -0.41
CCDC12-209ENST00000604164 XYLBO75191 536 aa12.52□□□□□ -0.41
CCDC12-209ENST00000604164 ZMYND10O75800 440 aa12.52□□□□□ -0.41
CCDC12-209ENST00000604164 PRPF6O94906 941 aaKnown RBP12.52□□□□□ -0.41
CCDC12-209ENST00000604164 PAPLNO95428 1278 aa12.52□□□□□ -0.41
CCDC12-209ENST00000604164 ADSSP30520 456 aa12.52□□□□□ -0.41
CCDC12-209ENST00000604164 ELF1P32519 619 aa12.52□□□□□ -0.41
CCDC12-209ENST00000604164 OR1D2P34982 312 aa12.52□□□□□ -0.41
CCDC12-209ENST00000604164 SYKP43405 635 aa12.52□□□□□ -0.41
CCDC12-209ENST00000604164 AFMP43652 599 aa12.52□□□□□ -0.41
CCDC12-209ENST00000604164 BRCC3P46736 316 aa12.52□□□□□ -0.41
CCDC12-209ENST00000604164 KCNA1Q09470 495 aa12.52□□□□□ -0.41
CCDC12-209ENST00000604164 PSMD2Q13200 908 aa12.52□□□□□ -0.41
CCDC12-209ENST00000604164 SURF1Q15526 300 aa12.52□□□□□ -0.41
CCDC12-209ENST00000604164 PPM1LQ5SGD2 360 aa12.52□□□□□ -0.41
CCDC12-209ENST00000604164 VARS2Q5ST30 1063 aaKnown RBP12.52□□□□□ -0.41
CCDC12-209ENST00000604164 ZBTB41Q5SVQ8 909 aa12.52□□□□□ -0.41
CCDC12-209ENST00000604164 ZNF280DQ6N043 979 aa12.52□□□□□ -0.41
CCDC12-209ENST00000604164 CD300LGQ6UXG3 332 aa12.52□□□□□ -0.41
CCDC12-209ENST00000604164 DSTYKQ6XUX3 929 aa12.52□□□□□ -0.41
CCDC12-209ENST00000604164 HS2ST1Q7LGA3 356 aa12.52□□□□□ -0.41
CCDC12-209ENST00000604164 USP37Q86T82 979 aa12.52□□□□□ -0.41
CCDC12-209ENST00000604164 SMG7Q92540 1137 aaKnown RBP12.52□□□□□ -0.41
CCDC12-209ENST00000604164 PRKD2Q9BZL6 878 aa12.52□□□□□ -0.41
CCDC12-209ENST00000604164 EXOC1Q9NV70 894 aa12.52□□□□□ -0.41
CCDC12-209ENST00000604164 FBXW11Q9UKB1 542 aa12.52□□□□□ -0.41
CCDC12-209ENST00000604164 DSEQ9UL01 958 aa12.52□□□□□ -0.41
CCDC12-209ENST00000604164 R3HCC1Q9Y3T6 440 aaKnown RBP12.52□□□□□ -0.41
CCDC12-209ENST00000604164 CUL9Q8IWT3 2517 aa12.51□□□□□ -0.41
CCDC12-209ENST00000604164 A0A1B0GVL5 298 aa12.51□□□□□ -0.41
CCDC12-209ENST00000604164 TISP43B9A030 160 aa12.51□□□□□ -0.41
CCDC12-209ENST00000604164 M0QZQ0 153 aa12.51□□□□□ -0.41
CCDC12-209ENST00000604164 ACTN4O43707 911 aaKnown RBP12.51□□□□□ -0.41
CCDC12-209ENST00000604164 KIF20AO95235 890 aa12.51□□□□□ -0.41
CCDC12-209ENST00000604164 POU2F2P09086 479 aa12.51□□□□□ -0.41
CCDC12-209ENST00000604164 PNPLA4P41247 253 aa12.51□□□□□ -0.41
CCDC12-209ENST00000604164 AARSP49588 968 aaKnown RBP eCLIP12.51□□□□□ -0.41
CCDC12-209ENST00000604164 YWHAHQ04917 246 aaPredicted RBP12.51□□□□□ -0.41
CCDC12-209ENST00000604164 SPAG1Q07617 926 aa12.51□□□□□ -0.41
CCDC12-209ENST00000604164 CTXN3Q4LDR2 81 aa12.51□□□□□ -0.41
CCDC12-209ENST00000604164 TMEM31Q5JXX7 168 aa12.51□□□□□ -0.41
CCDC12-209ENST00000604164 TPGS2Q68CL5 300 aa12.51□□□□□ -0.41
CCDC12-209ENST00000604164 SLC8B1Q6J4K2 584 aa12.51□□□□□ -0.41
CCDC12-209ENST00000604164 KANK3Q6NY19 840 aa12.51□□□□□ -0.41
CCDC12-209ENST00000604164 BRSK2Q8IWQ3 736 aa12.51□□□□□ -0.41
CCDC12-209ENST00000604164 ZDHHC14Q8IZN3 488 aa12.51□□□□□ -0.41
CCDC12-209ENST00000604164 GPD1LQ8N335 351 aa12.51□□□□□ -0.41
CCDC12-209ENST00000604164 ZNF461Q8TAF7 563 aa12.51□□□□□ -0.41
CCDC12-209ENST00000604164 GOLGA5Q8TBA6 731 aa12.51□□□□□ -0.41
CCDC12-209ENST00000604164 ZNF507Q8TCN5 953 aa12.51□□□□□ -0.41
CCDC12-209ENST00000604164 PAGE5Q96GU1 130 aa12.51□□□□□ -0.41
CCDC12-209ENST00000604164 ZNF560Q96MR9 790 aa12.51□□□□□ -0.41
CCDC12-209ENST00000604164 WDR6Q9NNW5 1121 aaKnown RBP12.51□□□□□ -0.41
CCDC12-209ENST00000604164 DPP3Q9NY33 737 aa12.51□□□□□ -0.41
CCDC12-209ENST00000604164 RBAKQ9NYW8 714 aaPredicted RBP12.51□□□□□ -0.41
CCDC12-209ENST00000604164 SERTAD1Q9UHV2 236 aa12.51□□□□□ -0.41
CCDC12-209ENST00000604164 HPSEQ9Y251 543 aa12.51□□□□□ -0.41
CCDC12-209ENST00000604164 CDY1Q9Y6F8 540 aa12.51□□□□□ -0.41
CCDC12-209ENST00000604164 VCANP13611 3396 aa12.51□□□□□ -0.41
CCDC12-209ENST00000604164 TRIP11Q15643 1979 aa12.5□□□□□ -0.41
CCDC12-209ENST00000604164 FAM237AA0A1B0GTK4 181 aa12.5□□□□□ -0.41
CCDC12-209ENST00000604164 ZNF233A6NK53 670 aa12.5□□□□□ -0.41
CCDC12-209ENST00000604164 OR6C75A6NL08 312 aa12.5□□□□□ -0.41
CCDC12-209ENST00000604164 I3L4J1 428 aa12.5□□□□□ -0.41
CCDC12-209ENST00000604164 GPR37L1O60883 481 aa12.5□□□□□ -0.41
CCDC12-209ENST00000604164 OAZ2O95190 189 aa12.5□□□□□ -0.41
CCDC12-209ENST00000604164 C8AP07357 584 aa12.5□□□□□ -0.41
CCDC12-209ENST00000604164 NFICP08651 508 aa12.5□□□□□ -0.41
CCDC12-209ENST00000604164 WEE2P0C1S8 567 aa12.5□□□□□ -0.41
CCDC12-209ENST00000604164 SPATA31D3P0C874 917 aa12.5□□□□□ -0.41
CCDC12-209ENST00000604164 ODC1P11926 461 aa12.5□□□□□ -0.41
CCDC12-209ENST00000604164 TYMPP19971 482 aa12.5□□□□□ -0.41
CCDC12-209ENST00000604164 LILRA4P59901 499 aa12.5□□□□□ -0.41
CCDC12-209ENST00000604164 EHHADHQ08426 723 aa12.5□□□□□ -0.41
CCDC12-209ENST00000604164 MRPL58Q14197 206 aaKnown RBP12.5□□□□□ -0.41
CCDC12-209ENST00000604164 C9orf57Q5W0N0 161 aa12.5□□□□□ -0.41
CCDC12-209ENST00000604164 CRELD2Q6UXH1 353 aaPredicted RBP12.5□□□□□ -0.41
CCDC12-209ENST00000604164 SPATA31D4Q6ZUB0 917 aa12.5□□□□□ -0.41
CCDC12-209ENST00000604164 EPM2AIP1Q7L775 607 aaPredicted RBP12.5□□□□□ -0.41
CCDC12-209ENST00000604164 METTL23Q86XA0 190 aa12.5□□□□□ -0.41
CCDC12-209ENST00000604164 FSIP1Q8NA03 581 aa12.5□□□□□ -0.41
CCDC12-209ENST00000604164 NOC3LQ8WTT2 800 aaKnown RBP12.5□□□□□ -0.41
CCDC12-209ENST00000604164 SAAL1Q96ER3 474 aa12.5□□□□□ -0.41
CCDC12-209ENST00000604164 BLZF1Q9H2G9 400 aa12.5□□□□□ -0.41
CCDC12-209ENST00000604164 EPHX3Q9H6B9 360 aa12.5□□□□□ -0.41
CCDC12-209ENST00000604164 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.5□□□□□ -0.41
CCDC12-209ENST00000604164 NCOR1O75376 2440 aa12.5□□□□□ -0.41
CCDC12-209ENST00000604164 CLUHO75153 1309 aa12.49□□□□□ -0.41
CCDC12-209ENST00000604164 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.49□□□□□ -0.41
CCDC12-209ENST00000604164 ANO9A1A5B4 782 aa12.49□□□□□ -0.41
CCDC12-209ENST00000604164 TULP1O00294 542 aaPredicted RBP12.49□□□□□ -0.41
CCDC12-209ENST00000604164 PIRO00625 290 aa12.49□□□□□ -0.41
CCDC12-209ENST00000604164 PRRG1O14668 218 aa12.49□□□□□ -0.41
CCDC12-209ENST00000604164 PRPF40AO75400 957 aaKnown RBP12.49□□□□□ -0.41
CCDC12-209ENST00000604164 ATF2P15336 505 aa12.49□□□□□ -0.41
CCDC12-209ENST00000604164 TAF6P49848 677 aa12.49□□□□□ -0.41
CCDC12-209ENST00000604164 NDUFA8P51970 172 aa12.49□□□□□ -0.41
CCDC12-209ENST00000604164 TFAMQ00059 246 aaKnown RBP12.49□□□□□ -0.41
CCDC12-209ENST00000604164 CUL4BQ13620 913 aa12.49□□□□□ -0.41
CCDC12-209ENST00000604164 KNOP1Q1ED39 458 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms