RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 ARHGAP25P42331 645 aa14.71□□□□□ -0.05
IRF3-229ENST00000601373 MYL6P60660 151 aa14.71□□□□□ -0.05
IRF3-229ENST00000601373 YWHAEP62258 255 aaKnown RBP14.71□□□□□ -0.05
IRF3-229ENST00000601373 RBP5P82980 135 aa14.71□□□□□ -0.05
IRF3-229ENST00000601373 NAB2Q15742 525 aa14.71□□□□□ -0.05
IRF3-229ENST00000601373 TRIM71Q2Q1W2 868 aaKnown RBP14.71□□□□□ -0.05
IRF3-229ENST00000601373 TWF2Q6IBS0 349 aaKnown RBP14.71□□□□□ -0.05
IRF3-229ENST00000601373 FAM43BQ6ZT52 329 aaPredicted RBP14.71□□□□□ -0.05
IRF3-229ENST00000601373 KIF12Q96FN5 646 aa14.71□□□□□ -0.05
IRF3-229ENST00000601373 SNX27Q96L92 541 aa14.71□□□□□ -0.05
IRF3-229ENST00000601373 AGPAT1Q99943 283 aa14.71□□□□□ -0.05
IRF3-229ENST00000601373 APOBEC3GQ9HC16 384 aaKnown RBP14.71□□□□□ -0.05
IRF3-229ENST00000601373 TRMT13Q9NUP7 481 aaKnown RBP14.71□□□□□ -0.05
IRF3-229ENST00000601373 INTUQ9ULD6 942 aa14.71□□□□□ -0.05
IRF3-229ENST00000601373 NUB1Q9Y5A7 615 aa14.71□□□□□ -0.05
IRF3-229ENST00000601373 CITO14578 2027 aa14.71□□□□□ -0.05
IRF3-229ENST00000601373 MEFVO15553 781 aaPredicted RBP14.7□□□□□ -0.06
IRF3-229ENST00000601373 CLSTN1O94985 981 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 TFRCP02786 760 aaKnown RBP14.7□□□□□ -0.06
IRF3-229ENST00000601373 KRT19P08727 400 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 P4HA1P13674 534 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 BMP8BP34820 402 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 GNG11P61952 73 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 NFX1Q12986 1120 aaKnown RBP14.7□□□□□ -0.06
IRF3-229ENST00000601373 ZNF699Q32M78 642 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 XKR4Q5GH76 650 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 FBXO47Q5MNV8 452 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 ALKBH5Q6P6C2 394 aaKnown RBP14.7□□□□□ -0.06
IRF3-229ENST00000601373 ALKAL1Q6UXT8 129 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 SYT10Q6XYQ8 523 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 ZNF677Q86XU0 584 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 GPIHBP1Q8IV16 184 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 C1orf127Q8N9H9 656 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 BEST2Q8NFU1 509 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 SLC30A5Q8TAD4 765 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 FAM84AQ96KN4 292 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 DEFB118Q96PH6 123 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 SYT11Q9BT88 431 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 NIF3L1Q9GZT8 377 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 FAM124BQ9H5Z6 455 aaPredicted RBP14.7□□□□□ -0.06
IRF3-229ENST00000601373 VRTNQ9H8Y1 702 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 ERVK-5Q9HDB9 667 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.7□□□□□ -0.063e-7■■■■■ 53.4
IRF3-229ENST00000601373 DPP3Q9NY33 737 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 CNTN3Q9P232 1028 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 NAGPAQ9UK23 515 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 OGDHLQ9ULD0 1010 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 CNTN6Q9UQ52 1028 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.7□□□□□ -0.06
IRF3-229ENST00000601373 FRMPD3Q5JV73 1810 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 CUL9Q8IWT3 2517 aa14.7□□□□□ -0.06
IRF3-229ENST00000601373 DDX3XO00571 662 aaKnown RBP eCLIP14.69□□□□□ -0.069e-11■□□□□ 9.6
IRF3-229ENST00000601373 CYP26A1O43174 497 aa14.69□□□□□ -0.06
IRF3-229ENST00000601373 RECQL4O94761 1208 aa14.69□□□□□ -0.06
IRF3-229ENST00000601373 ITGB3P05106 788 aa14.69□□□□□ -0.06
IRF3-229ENST00000601373 KRT5P13647 590 aa14.69□□□□□ -0.06
IRF3-229ENST00000601373 KCNE1P15382 129 aa14.69□□□□□ -0.06
IRF3-229ENST00000601373 ACO1P21399 889 aaKnown RBP14.69□□□□□ -0.06
IRF3-229ENST00000601373 CDK7P50613 346 aa14.69□□□□□ -0.06
IRF3-229ENST00000601373 PDE6CP51160 858 aa14.69□□□□□ -0.06
IRF3-229ENST00000601373 PAK2Q13177 524 aa14.69□□□□□ -0.06
IRF3-229ENST00000601373 ZBTB6Q15916 424 aa14.69□□□□□ -0.06
IRF3-229ENST00000601373 ZNF667Q5HYK9 610 aa14.69□□□□□ -0.06
IRF3-229ENST00000601373 SPOPLQ6IQ16 392 aa14.69□□□□□ -0.06
IRF3-229ENST00000601373 RNF10Q8N5U6 811 aaKnown RBP14.69□□□□□ -0.06
IRF3-229ENST00000601373 ANKLE1Q8NAG6 615 aa14.69□□□□□ -0.06
IRF3-229ENST00000601373 CAGE1Q8TC20 777 aa14.69□□□□□ -0.06
IRF3-229ENST00000601373 EPS8L1Q8TE68 723 aa14.69□□□□□ -0.06
IRF3-229ENST00000601373 ZNF592Q92610 1267 aa14.69□□□□□ -0.06
IRF3-229ENST00000601373 TRAIPQ9BWF2 469 aa14.69□□□□□ -0.06
IRF3-229ENST00000601373 XYLT2Q9H1B5 865 aa14.69□□□□□ -0.06
IRF3-229ENST00000601373 NXF3Q9H4D5 531 aaKnown RBP14.69□□□□□ -0.06
IRF3-229ENST00000601373 PARP2Q9UGN5 583 aa14.69□□□□□ -0.06
IRF3-229ENST00000601373 DNAI1Q9UI46 699 aa14.69□□□□□ -0.06
IRF3-229ENST00000601373 SIX4Q9UIU6 781 aa14.69□□□□□ -0.06
IRF3-229ENST00000601373 UBQLN1Q9UMX0 589 aaKnown RBP14.69□□□□□ -0.06
IRF3-229ENST00000601373 NENFQ9UMX5 172 aa14.69□□□□□ -0.06
IRF3-229ENST00000601373 GUCA1BQ9UMX6 200 aa14.69□□□□□ -0.06
IRF3-229ENST00000601373 IPPQ9Y573 584 aa14.69□□□□□ -0.06
IRF3-229ENST00000601373 PCDHB4Q9Y5E5 795 aa14.69□□□□□ -0.06
IRF3-229ENST00000601373 PCDHB2Q9Y5E7 798 aa14.69□□□□□ -0.06
IRF3-229ENST00000601373 BTNL10A8MVZ5 291 aa14.68□□□□□ -0.06
IRF3-229ENST00000601373 CD4P01730 458 aa14.68□□□□□ -0.06
IRF3-229ENST00000601373 H2AFZP0C0S5 128 aa14.68□□□□□ -0.06
IRF3-229ENST00000601373 SKIP12755 728 aa14.68□□□□□ -0.06
IRF3-229ENST00000601373 CYP11B1P15538 503 aa14.68□□□□□ -0.06
IRF3-229ENST00000601373 CYP3A5P20815 502 aa14.68□□□□□ -0.06
IRF3-229ENST00000601373 CASQ1P31415 396 aa14.68□□□□□ -0.06
IRF3-229ENST00000601373 RAB27AP51159 221 aa14.68□□□□□ -0.06
IRF3-229ENST00000601373 CDR2Q01850 454 aa14.68□□□□□ -0.06
IRF3-229ENST00000601373 H2AFVQ71UI9 128 aa14.68□□□□□ -0.06
IRF3-229ENST00000601373 RPUSD2Q8IZ73 545 aaKnown RBP14.68□□□□□ -0.06
IRF3-229ENST00000601373 TTC39CQ8N584 583 aa14.68□□□□□ -0.06
IRF3-229ENST00000601373 SMG8Q8ND04 991 aaKnown RBP14.68□□□□□ -0.06
IRF3-229ENST00000601373 CXorf38Q8TB03 319 aa14.68□□□□□ -0.06
IRF3-229ENST00000601373 LNX1Q8TBB1 728 aaPredicted RBP14.68□□□□□ -0.06
IRF3-229ENST00000601373 LACRTQ9GZZ8 138 aa14.68□□□□□ -0.06
IRF3-229ENST00000601373 CRISPLD2Q9H0B8 497 aa14.68□□□□□ -0.06
IRF3-229ENST00000601373 TRPV6Q9H1D0 765 aa14.68□□□□□ -0.06
IRF3-229ENST00000601373 CYP3A43Q9HB55 503 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms