RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 DAXXQ9UER7 740 aaPredicted RBP19.17■□□□□ 0.66
SHKBP1-223ENST00000600552 MTF2Q9Y483 593 aaPredicted RBP19.17■□□□□ 0.66
SHKBP1-223ENST00000600552 INSL5Q9Y5Q6 135 aa19.17■□□□□ 0.66
SHKBP1-223ENST00000600552 KANSL1LA0AUZ9 987 aa19.16■□□□□ 0.66
SHKBP1-223ENST00000600552 FAM170BA6NMN3 283 aa19.16■□□□□ 0.66
SHKBP1-223ENST00000600552 K7ENM7 598 aa19.16■□□□□ 0.66
SHKBP1-223ENST00000600552 POU2F2P09086 479 aa19.16■□□□□ 0.66
SHKBP1-223ENST00000600552 MYL4P12829 197 aa19.16■□□□□ 0.66
SHKBP1-223ENST00000600552 GLULP15104 373 aa19.16■□□□□ 0.66
SHKBP1-223ENST00000600552 ATF2P15336 505 aa19.16■□□□□ 0.66
SHKBP1-223ENST00000600552 STARD6P59095 220 aa19.16■□□□□ 0.66
SHKBP1-223ENST00000600552 MCM6Q14566 821 aa19.16■□□□□ 0.66
SHKBP1-223ENST00000600552 TMEM119Q4V9L6 283 aa19.16■□□□□ 0.66
SHKBP1-223ENST00000600552 CYP4A22Q5TCH4 519 aa19.16■□□□□ 0.66
SHKBP1-223ENST00000600552 TANGO2Q6ICL3 276 aa19.16■□□□□ 0.66
SHKBP1-223ENST00000600552 ZPBP2Q6X784 338 aa19.16■□□□□ 0.66
SHKBP1-223ENST00000600552 C1orf210Q8IVY1 113 aa19.16■□□□□ 0.66
SHKBP1-223ENST00000600552 ELMOD1Q8N336 334 aa19.16■□□□□ 0.66
SHKBP1-223ENST00000600552 REEP2Q9BRK0 252 aa19.16■□□□□ 0.66
SHKBP1-223ENST00000600552 SPATA6Q9NWH7 488 aaPredicted RBP19.16■□□□□ 0.66
SHKBP1-223ENST00000600552 ARHGEF37A1IGU5 675 aa19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 LACTBL1A8MY62 500 aa19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 H0YCG3 227 aa19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 HNRNPDLO14979 420 aaKnown RBP19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 CLTAP09496 248 aa19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 OR4Q2P0C623 313 aa19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 GJA1P17302 382 aa19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 CDR1P51861 262 aa19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 PFKPQ01813 784 aa19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 PPP2R3AQ06190 1150 aa19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 MCL1Q07820 350 aa19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 TWF1Q12792 350 aa19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 GRM2Q14416 872 aa19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 ZBTB41Q5SVQ8 909 aa19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 ARL6IP4Q66PJ3 421 aaKnown RBP19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 IQCEQ6IPM2 695 aa19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 DSTYKQ6XUX3 929 aa19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 TPRG1Q6ZUI0 275 aa19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 PDZD4Q76G19 769 aaPredicted RBP19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 RTL10Q7L3V2 364 aa19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 TCEAL8Q8IYN2 117 aa19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 ZNF512Q96ME7 567 aaPredicted RBP19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 PGLYRP2Q96PD5 576 aa19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 HINFPQ9BQA5 517 aa19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 BCO2Q9BYV7 579 aa19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 GDE1Q9NZC3 331 aa19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 PCDHB8Q9UN66 801 aa19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 MIA3Q5JRA6 1907 aa19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 CACNA1IQ9P0X4 2223 aa19.15■□□□□ 0.66
SHKBP1-223ENST00000600552 PDCD11Q14690 1871 aaKnown RBP19.14■□□□□ 0.65
SHKBP1-223ENST00000600552 TBC1D4O60343 1298 aa19.14■□□□□ 0.65
SHKBP1-223ENST00000600552 SP9P0CG40 484 aa19.14■□□□□ 0.65
SHKBP1-223ENST00000600552 NCKAP1LP55160 1127 aa19.14■□□□□ 0.65
SHKBP1-223ENST00000600552 GRIN1Q05586 938 aa19.14■□□□□ 0.65
SHKBP1-223ENST00000600552 MRPL58Q14197 206 aaKnown RBP19.14■□□□□ 0.65
SHKBP1-223ENST00000600552 KARSQ15046 597 aaKnown RBP19.14■□□□□ 0.65
SHKBP1-223ENST00000600552 TPGS2Q68CL5 300 aa19.14■□□□□ 0.65
SHKBP1-223ENST00000600552 POTEHQ6S545 545 aa19.14■□□□□ 0.65
SHKBP1-223ENST00000600552 RNF19BQ6ZMZ0 732 aa19.14■□□□□ 0.65
SHKBP1-223ENST00000600552 USP37Q86T82 979 aa19.14■□□□□ 0.65
SHKBP1-223ENST00000600552 RPF1Q9H9Y2 349 aaKnown RBP19.14■□□□□ 0.65
SHKBP1-223ENST00000600552 KCND2Q9NZV8 630 aa19.14■□□□□ 0.65
SHKBP1-223ENST00000600552 DLGAP2Q9P1A6 1054 aa19.14■□□□□ 0.65
SHKBP1-223ENST00000600552 TBX20Q9UMR3 447 aa19.14■□□□□ 0.65
SHKBP1-223ENST00000600552 VPS37CA5D8V6 355 aaPredicted RBP19.13■□□□□ 0.65
SHKBP1-223ENST00000600552 ZNF197O14709 1029 aa19.13■□□□□ 0.65
SHKBP1-223ENST00000600552 TBCAO75347 108 aaKnown RBP19.13■□□□□ 0.65
SHKBP1-223ENST00000600552 ECI2O75521 394 aa19.13■□□□□ 0.65
SHKBP1-223ENST00000600552 LMNAP02545 664 aaKnown RBP19.13■□□□□ 0.65
SHKBP1-223ENST00000600552 PLCG1P19174 1290 aa19.13■□□□□ 0.65
SHKBP1-223ENST00000600552 CCR2P41597 374 aa19.13■□□□□ 0.65
SHKBP1-223ENST00000600552 PRKCQQ04759 706 aa19.13■□□□□ 0.65
SHKBP1-223ENST00000600552 FAM78AQ5JUQ0 283 aa19.13■□□□□ 0.65
SHKBP1-223ENST00000600552 GPIHBP1Q8IV16 184 aa19.13■□□□□ 0.65
SHKBP1-223ENST00000600552 LRRC15Q8TF66 581 aa19.13■□□□□ 0.65
SHKBP1-223ENST00000600552 MSTO1Q9BUK6 570 aa19.13■□□□□ 0.65
SHKBP1-223ENST00000600552 HEBP1Q9NRV9 189 aa19.13■□□□□ 0.65
SHKBP1-223ENST00000600552 AFF4Q9UHB7 1163 aaKnown RBP19.13■□□□□ 0.65
SHKBP1-223ENST00000600552 UBQLN1Q9UMX0 589 aaKnown RBP19.13■□□□□ 0.65
SHKBP1-223ENST00000600552 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.13■□□□□ 0.65
SHKBP1-223ENST00000600552 CFAP54Q96N23 3096 aa19.13■□□□□ 0.65
SHKBP1-223ENST00000600552 TTC26A0AVF1 554 aa19.12■□□□□ 0.65
SHKBP1-223ENST00000600552 NRG2O14511 850 aaPredicted RBP19.12■□□□□ 0.65
SHKBP1-223ENST00000600552 NMT1P30419 496 aaKnown RBP19.12■□□□□ 0.65
SHKBP1-223ENST00000600552 YWHAHQ04917 246 aaPredicted RBP19.12■□□□□ 0.65
SHKBP1-223ENST00000600552 SF3A1Q15459 793 aaKnown RBP19.12■□□□□ 0.65
SHKBP1-223ENST00000600552 ENOX2Q16206 610 aaKnown RBP19.12■□□□□ 0.65
SHKBP1-223ENST00000600552 PRSS36Q5K4E3 855 aa19.12■□□□□ 0.65
SHKBP1-223ENST00000600552 KCTD17Q8N5Z5 321 aa19.12■□□□□ 0.65
SHKBP1-223ENST00000600552 AK8Q96MA6 479 aa19.12■□□□□ 0.65
SHKBP1-223ENST00000600552 ZSWIM3Q96MP5 696 aa19.12■□□□□ 0.65
SHKBP1-223ENST00000600552 SLITRK6Q9H5Y7 841 aa19.12■□□□□ 0.65
SHKBP1-223ENST00000600552 BRD9Q9H8M2 597 aa19.12■□□□□ 0.65
SHKBP1-223ENST00000600552 PLEKHA5Q9HAU0 1116 aa19.12■□□□□ 0.65
SHKBP1-223ENST00000600552 PARVGQ9HBI0 331 aa19.12■□□□□ 0.65
SHKBP1-223ENST00000600552 ZFP14Q9HCL3 533 aa19.12■□□□□ 0.65
SHKBP1-223ENST00000600552 LTB4R2Q9NPC1 389 aa19.12■□□□□ 0.65
SHKBP1-223ENST00000600552 CEP72Q9P209 647 aa19.12■□□□□ 0.65
SHKBP1-223ENST00000600552 ODF2LQ9ULJ1 636 aa19.12■□□□□ 0.65
SHKBP1-223ENST00000600552 SPTBN4Q9H254 2564 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms