RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 C11orf63Q6NUN7 778 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 RUFY4Q6ZNE9 571 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 EPS8L3Q8TE67 593 aaKnown RBP12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 NTPCRQ9BSD7 190 aaKnown RBP12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 PLVAPQ9BX97 442 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 ZNF112Q9UJU3 913 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 R3HDM2Q9Y2K5 976 aaKnown RBP12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 RGS16O15492 202 aaPredicted RBP12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 CHRNA3P32297 505 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 NAMPTP43490 491 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 MAPK6Q16659 721 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 SMTNL2Q2TAL5 461 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 CYP4F22Q6NT55 531 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 LBX2Q6XYB7 198 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 B4GALNT4Q76KP1 1039 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 ZBTB8OSQ8IWT0 167 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 PCYT2Q99447 389 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 HERPUD2Q9BSE4 406 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 C17orf75Q9HAS0 396 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 TMBIM4Q9HC24 238 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 AKT3Q9Y243 479 aa12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.28□□□□□ -0.44
ARHGEF1-220ENST00000600274 KIAA0391O15091 583 aaKnown RBP12.27□□□□□ -0.44
ARHGEF1-220ENST00000600274 ZBTB48P10074 688 aaPredicted RBP12.27□□□□□ -0.44
ARHGEF1-220ENST00000600274 TCF4P15884 667 aa12.27□□□□□ -0.44
ARHGEF1-220ENST00000600274 OAZ1P54368 228 aa12.27□□□□□ -0.44
ARHGEF1-220ENST00000600274 SYCP2LQ5T4T6 812 aa12.27□□□□□ -0.44
ARHGEF1-220ENST00000600274 CRELD2Q6UXH1 353 aaPredicted RBP12.27□□□□□ -0.44
ARHGEF1-220ENST00000600274 ZNF365Q70YC5 407 aa12.27□□□□□ -0.44
ARHGEF1-220ENST00000600274 EFCAB13Q8IY85 973 aa12.27□□□□□ -0.44
ARHGEF1-220ENST00000600274 MCEEQ96PE7 176 aa12.27□□□□□ -0.44
ARHGEF1-220ENST00000600274 DDX23Q9BUQ8 820 aaKnown RBP12.27□□□□□ -0.44
ARHGEF1-220ENST00000600274 C10orf88Q9H8K7 445 aa12.27□□□□□ -0.44
ARHGEF1-220ENST00000600274 PASKQ96RG2 1323 aa12.27□□□□□ -0.44
ARHGEF1-220ENST00000600274 HMGB1P1B2RPK0 211 aaPredicted RBP12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 H0YCG3 227 aa12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 CTNNA2P26232 953 aa12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 IREB2P48200 963 aaKnown RBP12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 PEX5P50542 639 aa12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 TAS2R40P59535 323 aa12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 ACTN3Q08043 901 aaPredicted RBP12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 LAMTOR4Q0VGL1 99 aa12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 NEDD9Q14511 834 aa12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 LRRC14Q15048 493 aa12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 LONRF1Q17RB8 773 aa12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 CHADLQ6NUI6 762 aa12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 TMEM192Q8IY95 271 aa12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 ANKRD42Q8N9B4 389 aa12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 CHST13Q8NET6 341 aa12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 GIMAP7Q8NHV1 300 aa12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 DYDC1Q8WWB3 177 aa12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 DDX1Q92499 740 aaKnown RBP12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 HVCN1Q96D96 273 aa12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 ZWILCHQ9H900 591 aa12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 IFI35P80217 286 aaPredicted RBP12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 LACTBP83111 547 aaPredicted RBP12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 PSMD6Q15008 389 aa12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 WDR72Q3MJ13 1102 aa12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 DUPD1Q68J44 220 aa12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 SLFN12LQ6IEE8 588 aa12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 CPLX4Q7Z7G2 160 aa12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 GPC2Q8N158 579 aa12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 DHX33Q9H6R0 707 aaKnown RBP12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 KCNK9Q9NPC2 374 aa12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 GINM1Q9NU53 330 aa12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 UVRAGQ9P2Y5 699 aa12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 POLIQ9UNA4 740 aa12.27□□□□□ -0.45
ARHGEF1-220ENST00000600274 TNS1Q9HBL0 1735 aaKnown RBP12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 C4BPAP04003 597 aaKnown RBP12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 MDH1P40925 334 aaKnown RBP12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 GCNT1Q02742 428 aa12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 E2F5Q15329 346 aa12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 ZNF699Q32M78 642 aa12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 KCNT1Q5JUK3 1230 aa12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 EEF1DP3Q658K8 133 aa12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 VTI1AQ96AJ9 217 aa12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 MMP19Q99542 508 aa12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 ZNF148Q9UQR1 794 aa12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 COQ4Q9Y3A0 265 aa12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 PCDHA3Q9Y5H8 950 aa12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 MAFBQ9Y5Q3 323 aaPredicted RBP12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 GRIN2DO15399 1336 aa12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 GOLGA8MH3BSY2 632 aa12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 ADCY3O60266 1144 aa12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 KRT1P04264 644 aa12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 CYP1A2P05177 515 aa12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 CLTAP09496 248 aa12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 CXCL8P10145 99 aa12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 GPAT2Q6NUI2 795 aa12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 EFCAB12Q6NXP0 572 aa12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 CPB2Q96IY4 423 aa12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 C9orf72Q96LT7 481 aa12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 FBXL18Q96ME1 805 aa12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 RPS6KC1Q96S38 1066 aa12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 PAIP2Q9BPZ3 127 aaKnown RBP12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 MRPL4Q9BYD3 311 aaKnown RBP12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 PCSK1NQ9UHG2 260 aa12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 MROH7Q68CQ1 1323 aa12.26□□□□□ -0.45
ARHGEF1-220ENST00000600274 LRRD1A4D1F6 860 aa12.25□□□□□ -0.45
ARHGEF1-220ENST00000600274 VTNP04004 478 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms