RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 NFICP08651 508 aa24.53■■□□□ 1.52
CCDC9-204ENST00000599398 RAB33AQ14088 237 aa24.53■■□□□ 1.52
CCDC9-204ENST00000599398 RSPO2Q6UXX9 243 aaPredicted RBP24.53■■□□□ 1.52
CCDC9-204ENST00000599398 LEO1Q8WVC0 666 aaPredicted RBP24.53■■□□□ 1.52
CCDC9-204ENST00000599398 HPS3Q969F9 1004 aa24.53■■□□□ 1.52
CCDC9-204ENST00000599398 ZNF707Q96C28 371 aaPredicted RBP24.53■■□□□ 1.52
CCDC9-204ENST00000599398 ACSF2Q96CM8 615 aaPredicted RBP24.53■■□□□ 1.52
CCDC9-204ENST00000599398 PYM1Q9BRP8 204 aaKnown RBP24.53■■□□□ 1.52
CCDC9-204ENST00000599398 PRKD2Q9BZL6 878 aa24.53■■□□□ 1.52
CCDC9-204ENST00000599398 TMEM206Q9H813 350 aa24.53■■□□□ 1.52
CCDC9-204ENST00000599398 KCNH3Q9ULD8 1083 aa24.53■■□□□ 1.52
CCDC9-204ENST00000599398 USTQ9Y2C2 406 aa24.53■■□□□ 1.52
CCDC9-204ENST00000599398 ATP6V1DQ9Y5K8 247 aa24.53■■□□□ 1.52
CCDC9-204ENST00000599398 H7C4K7 107 aa24.52■■□□□ 1.52
CCDC9-204ENST00000599398 C8AP07357 584 aa24.52■■□□□ 1.52
CCDC9-204ENST00000599398 ARPP19P56211 112 aa24.52■■□□□ 1.52
CCDC9-204ENST00000599398 PPM1LQ5SGD2 360 aa24.52■■□□□ 1.52
CCDC9-204ENST00000599398 SPATA1Q5VX52 437 aa24.52■■□□□ 1.52
CCDC9-204ENST00000599398 OTOP3Q7RTS5 596 aa24.52■■□□□ 1.52
CCDC9-204ENST00000599398 CEP57L1Q8IYX8 460 aa24.52■■□□□ 1.52
CCDC9-204ENST00000599398 APPL2Q8NEU8 664 aa24.52■■□□□ 1.52
CCDC9-204ENST00000599398 NOC3LQ8WTT2 800 aaKnown RBP24.52■■□□□ 1.52
CCDC9-204ENST00000599398 SAAL1Q96ER3 474 aa24.52■■□□□ 1.52
CCDC9-204ENST00000599398 C7orf25Q9BPX7 421 aa24.52■■□□□ 1.52
CCDC9-204ENST00000599398 FAM213AQ9BRX8 229 aa24.52■■□□□ 1.52
CCDC9-204ENST00000599398 BLZF1Q9H2G9 400 aa24.52■■□□□ 1.52
CCDC9-204ENST00000599398 ASB7Q9H672 318 aa24.52■■□□□ 1.52
CCDC9-204ENST00000599398 COL9A1P20849 921 aa24.51■■□□□ 1.51
CCDC9-204ENST00000599398 CASP1P29466 404 aa24.51■■□□□ 1.51
CCDC9-204ENST00000599398 AFMP43652 599 aa24.51■■□□□ 1.51
CCDC9-204ENST00000599398 PTPN21Q16825 1174 aa24.51■■□□□ 1.51
CCDC9-204ENST00000599398 CTXN3Q4LDR2 81 aa24.51■■□□□ 1.51
CCDC9-204ENST00000599398 PLCD3Q8N3E9 789 aa24.51■■□□□ 1.51
CCDC9-204ENST00000599398 GLIS3Q8NEA6 775 aa24.51■■□□□ 1.51
CCDC9-204ENST00000599398 SLC7A14Q8TBB6 771 aa24.51■■□□□ 1.51
CCDC9-204ENST00000599398 EDAQ92838 391 aa24.51■■□□□ 1.51
CCDC9-204ENST00000599398 RHOBTB2Q9BYZ6 727 aa24.51■■□□□ 1.51
CCDC9-204ENST00000599398 WDR6Q9NNW5 1121 aaKnown RBP24.51■■□□□ 1.51
CCDC9-204ENST00000599398 LIMD1Q9UGP4 676 aa24.51■■□□□ 1.51
CCDC9-204ENST00000599398 PCDHB8Q9UN66 801 aa24.51■■□□□ 1.51
CCDC9-204ENST00000599398 DERAQ9Y315 318 aa24.51■■□□□ 1.51
CCDC9-204ENST00000599398 CLUHO75153 1309 aa24.51■■□□□ 1.51
CCDC9-204ENST00000599398 PRR33A8MZF0 331 aa24.5■■□□□ 1.51
CCDC9-204ENST00000599398 GARTP22102 1010 aa24.5■■□□□ 1.51
CCDC9-204ENST00000599398 ZXDAP98168 799 aa24.5■■□□□ 1.51
CCDC9-204ENST00000599398 FAM26FQ5R3K3 315 aa24.5■■□□□ 1.51
CCDC9-204ENST00000599398 ZNF280DQ6N043 979 aa24.5■■□□□ 1.51
CCDC9-204ENST00000599398 CNNM4Q6P4Q7 775 aa24.5■■□□□ 1.51
CCDC9-204ENST00000599398 CRELD2Q6UXH1 353 aaPredicted RBP24.5■■□□□ 1.51
CCDC9-204ENST00000599398 DSTYKQ6XUX3 929 aa24.5■■□□□ 1.51
CCDC9-204ENST00000599398 ZDHHC14Q8IZN3 488 aa24.5■■□□□ 1.51
CCDC9-204ENST00000599398 PCIF1Q9H4Z3 704 aa24.5■■□□□ 1.51
CCDC9-204ENST00000599398 POLIQ9UNA4 740 aa24.5■■□□□ 1.51
CCDC9-204ENST00000599398 DOCK6Q96HP0 2047 aa24.5■■□□□ 1.51
CCDC9-204ENST00000599398 TECTAO75443 2155 aa24.49■■□□□ 1.51
CCDC9-204ENST00000599398 A0A1B0GVL5 298 aa24.49■■□□□ 1.51
CCDC9-204ENST00000599398 PPEF2O14830 753 aa24.49■■□□□ 1.51
CCDC9-204ENST00000599398 IL18RAPO95256 599 aa24.49■■□□□ 1.51
CCDC9-204ENST00000599398 LDHAP00338 332 aaKnown RBP24.49■■□□□ 1.51
CCDC9-204ENST00000599398 HNRNPA1P09651 372 aaKnown RBP eCLIP24.49■■□□□ 1.51
CCDC9-204ENST00000599398 GBP2P32456 591 aaPredicted RBP24.49■■□□□ 1.51
CCDC9-204ENST00000599398 POU5F1Q01860 360 aaKnown RBP24.49■■□□□ 1.51
CCDC9-204ENST00000599398 ROR1Q01973 937 aa24.49■■□□□ 1.51
CCDC9-204ENST00000599398 SLC8B1Q6J4K2 584 aa24.49■■□□□ 1.51
CCDC9-204ENST00000599398 ARMCX5Q6P1M9 558 aa24.49■■□□□ 1.51
CCDC9-204ENST00000599398 UNC13DQ70J99 1090 aa24.49■■□□□ 1.51
CCDC9-204ENST00000599398 ZSWIM2Q8NEG5 633 aa24.49■■□□□ 1.51
CCDC9-204ENST00000599398 CBWD1Q9BRT8 395 aa24.49■■□□□ 1.51
CCDC9-204ENST00000599398 SERTAD1Q9UHV2 236 aa24.49■■□□□ 1.51
CCDC9-204ENST00000599398 FBXL5Q9UKA1 691 aa24.49■■□□□ 1.51
CCDC9-204ENST00000599398 C2CD2Q9Y426 696 aa24.49■■□□□ 1.51
CCDC9-204ENST00000599398 TIMM13Q9Y5L4 95 aaPredicted RBP24.49■■□□□ 1.51
CCDC9-204ENST00000599398 GOLGA8IPA6NC78 632 aa24.48■■□□□ 1.51
CCDC9-204ENST00000599398 GOLGA8JA6NMD2 632 aa24.48■■□□□ 1.51
CCDC9-204ENST00000599398 M0QZQ0 153 aa24.48■■□□□ 1.51
CCDC9-204ENST00000599398 CCL16O15467 120 aa24.48■■□□□ 1.51
CCDC9-204ENST00000599398 ASGR2P07307 311 aa24.48■■□□□ 1.51
CCDC9-204ENST00000599398 PFKFB1P16118 471 aa24.48■■□□□ 1.51
CCDC9-204ENST00000599398 CMA1P23946 247 aa24.48■■□□□ 1.51
CCDC9-204ENST00000599398 MRPL58Q14197 206 aaKnown RBP24.48■■□□□ 1.51
CCDC9-204ENST00000599398 C9orf57Q5W0N0 161 aa24.48■■□□□ 1.51
CCDC9-204ENST00000599398 USP37Q86T82 979 aa24.48■■□□□ 1.51
CCDC9-204ENST00000599398 GRAMD1CQ8IYS0 662 aa24.48■■□□□ 1.51
CCDC9-204ENST00000599398 SCN1AP35498 2009 aa24.47■■□□□ 1.51
CCDC9-204ENST00000599398 XYLBO75191 536 aa24.47■■□□□ 1.51
CCDC9-204ENST00000599398 PAPLNO95428 1278 aa24.47■■□□□ 1.51
CCDC9-204ENST00000599398 SLFN14P0C7P3 912 aa24.47■■□□□ 1.51
CCDC9-204ENST00000599398 ELF1P32519 619 aa24.47■■□□□ 1.51
CCDC9-204ENST00000599398 YWHAHQ04917 246 aaPredicted RBP24.47■■□□□ 1.51
CCDC9-204ENST00000599398 CUL4BQ13620 913 aa24.47■■□□□ 1.51
CCDC9-204ENST00000599398 UVSSAQ2YD98 709 aa24.47■■□□□ 1.51
CCDC9-204ENST00000599398 ZNF461Q8TAF7 563 aa24.47■■□□□ 1.51
CCDC9-204ENST00000599398 SCAND2PQ9GZW5 306 aaPredicted RBP24.47■■□□□ 1.51
CCDC9-204ENST00000599398 DPP3Q9NY33 737 aa24.47■■□□□ 1.51
CCDC9-204ENST00000599398 RBAKQ9NYW8 714 aaPredicted RBP24.47■■□□□ 1.51
CCDC9-204ENST00000599398 WDR27A2RRH5 827 aa24.46■■□□□ 1.51
CCDC9-204ENST00000599398 PRRG1O14668 218 aa24.46■■□□□ 1.51
CCDC9-204ENST00000599398 EIF3DO15371 548 aaKnown RBP eCLIP24.46■■□□□ 1.51
CCDC9-204ENST00000599398 EXTL3O43909 919 aa24.46■■□□□ 1.51
CCDC9-204ENST00000599398 TBC1D4O60343 1298 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms