RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 PDIA4P13667 645 aaKnown RBP13.21□□□□□ -0.29
LIG1-217ENST00000599165 IDEP14735 1019 aa13.21□□□□□ -0.29
LIG1-217ENST00000599165 NTHL1P78549 312 aa13.21□□□□□ -0.29
LIG1-217ENST00000599165 PPP2R3AQ06190 1150 aa13.21□□□□□ -0.29
LIG1-217ENST00000599165 KYAT1Q16773 422 aa13.21□□□□□ -0.29
LIG1-217ENST00000599165 RESP18Q5W5W9 173 aa13.21□□□□□ -0.29
LIG1-217ENST00000599165 ADALQ6DHV7 355 aa13.21□□□□□ -0.29
LIG1-217ENST00000599165 CNNM4Q6P4Q7 775 aa13.21□□□□□ -0.29
LIG1-217ENST00000599165 PDXDC1Q6P996 788 aa13.21□□□□□ -0.29
LIG1-217ENST00000599165 POTEHQ6S545 545 aa13.21□□□□□ -0.29
LIG1-217ENST00000599165 CYP26C1Q6V0L0 522 aa13.21□□□□□ -0.29
LIG1-217ENST00000599165 ANKS3Q6ZW76 656 aa13.21□□□□□ -0.29
LIG1-217ENST00000599165 FAM84AQ96KN4 292 aa13.21□□□□□ -0.29
LIG1-217ENST00000599165 RPF1Q9H9Y2 349 aaKnown RBP13.21□□□□□ -0.29
LIG1-217ENST00000599165 PANK4Q9NVE7 773 aa13.21□□□□□ -0.29
LIG1-217ENST00000599165 FBXL5Q9UKA1 691 aa13.21□□□□□ -0.29
LIG1-217ENST00000599165 AGO2Q9UKV8 859 aaKnown RBP13.21□□□□□ -0.29
LIG1-217ENST00000599165 UBQLN1Q9UMX0 589 aaKnown RBP13.21□□□□□ -0.29
LIG1-217ENST00000599165 ANO9A1A5B4 782 aa13.2□□□□□ -0.3
LIG1-217ENST00000599165 TMEM221A6NGB7 291 aa13.2□□□□□ -0.3
LIG1-217ENST00000599165 SPDYE4A6NLX3 237 aa13.2□□□□□ -0.3
LIG1-217ENST00000599165 M0R296 226 aa13.2□□□□□ -0.3
LIG1-217ENST00000599165 NRG2O14511 850 aaPredicted RBP13.2□□□□□ -0.3
LIG1-217ENST00000599165 TRAPPC3O43617 180 aa13.2□□□□□ -0.3
LIG1-217ENST00000599165 PRPF6O94906 941 aaKnown RBP13.2□□□□□ -0.3
LIG1-217ENST00000599165 GCNT3O95395 438 aa13.2□□□□□ -0.3
LIG1-217ENST00000599165 SEC24AO95486 1093 aa13.2□□□□□ -0.3
LIG1-217ENST00000599165 PDGFBP01127 241 aaPredicted RBP13.2□□□□□ -0.3
LIG1-217ENST00000599165 ABCD1P33897 745 aa13.2□□□□□ -0.3
LIG1-217ENST00000599165 MCM4P33991 863 aa13.2□□□□□ -0.3
LIG1-217ENST00000599165 SIGLEC14Q08ET2 396 aa13.2□□□□□ -0.3
LIG1-217ENST00000599165 EPM2AIP1Q7L775 607 aaPredicted RBP13.2□□□□□ -0.3
LIG1-217ENST00000599165 BMP8AQ7Z5Y6 402 aa13.2□□□□□ -0.3
LIG1-217ENST00000599165 SLC7A14Q8TBB6 771 aa13.2□□□□□ -0.3
LIG1-217ENST00000599165 KCNG4Q8TDN1 519 aa13.2□□□□□ -0.3
LIG1-217ENST00000599165 CBWD1Q9BRT8 395 aa13.2□□□□□ -0.3
LIG1-217ENST00000599165 DPP7Q9UHL4 492 aa13.2□□□□□ -0.3
LIG1-217ENST00000599165 PCDHB8Q9UN66 801 aa13.2□□□□□ -0.3
LIG1-217ENST00000599165 SORCS3Q9UPU3 1222 aa13.2□□□□□ -0.3
LIG1-217ENST00000599165 NUB1Q9Y5A7 615 aa13.2□□□□□ -0.3
LIG1-217ENST00000599165 CACNA1HO95180 2353 aa13.19□□□□□ -0.3
LIG1-217ENST00000599165 PIRO00625 290 aa13.19□□□□□ -0.3
LIG1-217ENST00000599165 CCL16O15467 120 aa13.19□□□□□ -0.3
LIG1-217ENST00000599165 POLR2DO15514 142 aaKnown RBP13.19□□□□□ -0.3
LIG1-217ENST00000599165 POU2F2P09086 479 aa13.19□□□□□ -0.3
LIG1-217ENST00000599165 HNRNPA1P09651 372 aaKnown RBP eCLIP13.19□□□□□ -0.3
LIG1-217ENST00000599165 HOXA9P31269 272 aa13.19□□□□□ -0.3
LIG1-217ENST00000599165 C9orf57Q5W0N0 161 aa13.19□□□□□ -0.3
LIG1-217ENST00000599165 ATL3Q6DD88 541 aa13.19□□□□□ -0.3
LIG1-217ENST00000599165 SLFN12LQ6IEE8 588 aa13.19□□□□□ -0.3
LIG1-217ENST00000599165 OTOP3Q7RTS5 596 aa13.19□□□□□ -0.3
LIG1-217ENST00000599165 GRASPQ7Z6J2 395 aaPredicted RBP13.19□□□□□ -0.3
LIG1-217ENST00000599165 ZNF461Q8TAF7 563 aa13.19□□□□□ -0.3
LIG1-217ENST00000599165 CXorf38Q8TB03 319 aa13.19□□□□□ -0.3
LIG1-217ENST00000599165 RSAD2Q8WXG1 361 aa13.19□□□□□ -0.3
LIG1-217ENST00000599165 POMGNT1Q8WZA1 660 aa13.19□□□□□ -0.3
LIG1-217ENST00000599165 FAM212AQ96EL1 285 aa13.19□□□□□ -0.3
LIG1-217ENST00000599165 SAAL1Q96ER3 474 aa13.19□□□□□ -0.3
LIG1-217ENST00000599165 BORCS6Q96GS4 357 aa13.19□□□□□ -0.3
LIG1-217ENST00000599165 ACCSQ96QU6 501 aa13.19□□□□□ -0.3
LIG1-217ENST00000599165 TSPAN18Q96SJ8 248 aa13.19□□□□□ -0.3
LIG1-217ENST00000599165 C7orf25Q9BPX7 421 aa13.19□□□□□ -0.3
LIG1-217ENST00000599165 CUEDC2Q9H467 287 aa13.19□□□□□ -0.3
LIG1-217ENST00000599165 ASB7Q9H672 318 aa13.19□□□□□ -0.3
LIG1-217ENST00000599165 HCFC1R1Q9NWW0 138 aa13.19□□□□□ -0.3
LIG1-217ENST00000599165 EPS15L1Q9UBC2 864 aa13.19□□□□□ -0.3
LIG1-217ENST00000599165 TIMM13Q9Y5L4 95 aaPredicted RBP13.19□□□□□ -0.3
LIG1-217ENST00000599165 WDFY4Q6ZS81 3184 aa13.18□□□□□ -0.3
LIG1-217ENST00000599165 ARHGEF37A1IGU5 675 aa13.18□□□□□ -0.3
LIG1-217ENST00000599165 ACTN4O43707 911 aaKnown RBP13.18□□□□□ -0.3
LIG1-217ENST00000599165 OAZ2O95190 189 aa13.18□□□□□ -0.3
LIG1-217ENST00000599165 ME1P48163 572 aa13.18□□□□□ -0.3
LIG1-217ENST00000599165 LILRA4P59901 499 aa13.18□□□□□ -0.3
LIG1-217ENST00000599165 POU5F1Q01860 360 aaKnown RBP13.18□□□□□ -0.3
LIG1-217ENST00000599165 TMEM132DQ14C87 1099 aa13.18□□□□□ -0.3
LIG1-217ENST00000599165 PPM1LQ5SGD2 360 aa13.18□□□□□ -0.3
LIG1-217ENST00000599165 BRSK2Q8IWQ3 736 aa13.18□□□□□ -0.3
LIG1-217ENST00000599165 CD302Q8IX05 232 aa13.18□□□□□ -0.3
LIG1-217ENST00000599165 GRAMD1CQ8IYS0 662 aa13.18□□□□□ -0.3
LIG1-217ENST00000599165 PLCD3Q8N3E9 789 aa13.18□□□□□ -0.3
LIG1-217ENST00000599165 IQUBQ8NA54 791 aa13.18□□□□□ -0.3
LIG1-217ENST00000599165 ST13P5Q8NFI4 369 aaPredicted RBP13.18□□□□□ -0.3
LIG1-217ENST00000599165 ITFG1Q8TB96 612 aa13.18□□□□□ -0.3
LIG1-217ENST00000599165 LEO1Q8WVC0 666 aaPredicted RBP13.18□□□□□ -0.3
LIG1-217ENST00000599165 BLZF1Q9H2G9 400 aa13.18□□□□□ -0.3
LIG1-217ENST00000599165 CRISPLD1Q9H336 500 aa13.18□□□□□ -0.3
LIG1-217ENST00000599165 KCNK12Q9HB15 430 aa13.18□□□□□ -0.3
LIG1-217ENST00000599165 DNMT3BQ9UBC3 853 aaKnown RBP13.18□□□□□ -0.3
LIG1-217ENST00000599165 HPSEQ9Y251 543 aa13.18□□□□□ -0.3
LIG1-217ENST00000599165 DERAQ9Y315 318 aa13.18□□□□□ -0.3
LIG1-217ENST00000599165 C2CD2Q9Y426 696 aa13.18□□□□□ -0.3
LIG1-217ENST00000599165 PTPRJQ12913 1337 aa13.17□□□□□ -0.3
LIG1-217ENST00000599165 GOLGA8IPA6NC78 632 aa13.17□□□□□ -0.3
LIG1-217ENST00000599165 GOLGA8JA6NMD2 632 aa13.17□□□□□ -0.3
LIG1-217ENST00000599165 TGFB1I1O43294 461 aa13.17□□□□□ -0.3
LIG1-217ENST00000599165 KLRC4O43908 158 aa13.17□□□□□ -0.3
LIG1-217ENST00000599165 OR4Q2P0C623 313 aa13.17□□□□□ -0.3
LIG1-217ENST00000599165 ATF2P15336 505 aa13.17□□□□□ -0.3
LIG1-217ENST00000599165 GARTP22102 1010 aa13.17□□□□□ -0.3
LIG1-217ENST00000599165 VCPP55072 806 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms