RNA–Protein interactions for RNA: ENST00000599016.5

LTBP4-224, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-224ENST00000599016 NAB2Q15742 525 aa23.55■■□□□ 1.36
LTBP4-224ENST00000599016 PAN2Q504Q3 1202 aaKnown RBP23.55■■□□□ 1.36
LTBP4-224ENST00000599016 WDR44Q5JSH3 913 aa23.55■■□□□ 1.36
LTBP4-224ENST00000599016 DDX27Q96GQ7 796 aaKnown RBP23.55■■□□□ 1.36
LTBP4-224ENST00000599016 INTS2Q9H0H0 1204 aaKnown RBP23.55■■□□□ 1.36
LTBP4-224ENST00000599016 ATP2A2P16615 1042 aaKnown RBP23.54■■□□□ 1.36
LTBP4-224ENST00000599016 ATICP31939 592 aa23.54■■□□□ 1.36
LTBP4-224ENST00000599016 SGSM1Q2NKQ1 1148 aa23.54■■□□□ 1.36
LTBP4-224ENST00000599016 RASIP1Q5U651 963 aa23.54■■□□□ 1.36
LTBP4-224ENST00000599016 C9orf57Q5W0N0 161 aa23.54■■□□□ 1.36
LTBP4-224ENST00000599016 CMTR2Q8IYT2 770 aaKnown RBP23.54■■□□□ 1.36
LTBP4-224ENST00000599016 TAF4BQ92750 862 aa23.54■■□□□ 1.36
LTBP4-224ENST00000599016 ZNF689Q96CS4 500 aaPredicted RBP23.54■■□□□ 1.36
LTBP4-224ENST00000599016 RNPC3Q96LT9 517 aaKnown RBP23.54■■□□□ 1.36
LTBP4-224ENST00000599016 ZNF560Q96MR9 790 aa23.54■■□□□ 1.36
LTBP4-224ENST00000599016 YME1L1Q96TA2 773 aa23.54■■□□□ 1.36
LTBP4-224ENST00000599016 GOLGA2P5Q9HBQ8 144 aa23.54■■□□□ 1.36
LTBP4-224ENST00000599016 SIX4Q9UIU6 781 aa23.54■■□□□ 1.36
LTBP4-224ENST00000599016 SPTBN5Q9NRC6 3674 aaKnown RBP23.53■■□□□ 1.36
LTBP4-224ENST00000599016 ZC3H11AO75152 810 aaKnown RBP eCLIP23.53■■□□□ 1.36
LTBP4-224ENST00000599016 GJB5O95377 273 aa23.53■■□□□ 1.36
LTBP4-224ENST00000599016 CST3P01034 146 aaPredicted RBP23.53■■□□□ 1.36
LTBP4-224ENST00000599016 PNPLA4P41247 253 aa23.53■■□□□ 1.36
LTBP4-224ENST00000599016 MYO1EQ12965 1108 aa23.53■■□□□ 1.36
LTBP4-224ENST00000599016 TMCO2Q7Z6W1 182 aaPredicted RBP23.53■■□□□ 1.36
LTBP4-224ENST00000599016 HERC6Q8IVU3 1022 aa23.53■■□□□ 1.36
LTBP4-224ENST00000599016 SEMA4DQ92854 862 aa23.53■■□□□ 1.36
LTBP4-224ENST00000599016 LSM14BQ9BX40 385 aaKnown RBP23.53■■□□□ 1.36
LTBP4-224ENST00000599016 SCN1AP35498 2009 aa23.52■■□□□ 1.36
LTBP4-224ENST00000599016 ANO9A1A5B4 782 aa23.52■■□□□ 1.36
LTBP4-224ENST00000599016 CASTOR2A6NHX0 329 aa23.52■■□□□ 1.36
LTBP4-224ENST00000599016 PODXLO00592 558 aa23.52■■□□□ 1.36
LTBP4-224ENST00000599016 SLC9A1P19634 815 aa23.52■■□□□ 1.36
LTBP4-224ENST00000599016 PON1P27169 355 aa23.52■■□□□ 1.36
LTBP4-224ENST00000599016 PBX1P40424 430 aa23.52■■□□□ 1.36
LTBP4-224ENST00000599016 MYL6P60660 151 aa23.52■■□□□ 1.36
LTBP4-224ENST00000599016 DSC1Q08554 894 aa23.52■■□□□ 1.36
LTBP4-224ENST00000599016 KCNMA1Q12791 1236 aa23.52■■□□□ 1.36
LTBP4-224ENST00000599016 BTG3Q14201 252 aaPredicted RBP23.52■■□□□ 1.36
LTBP4-224ENST00000599016 ZNF699Q32M78 642 aa23.52■■□□□ 1.36
LTBP4-224ENST00000599016 C9orf50Q5SZB4 431 aa23.52■■□□□ 1.36
LTBP4-224ENST00000599016 TRIM65Q6PJ69 517 aa23.52■■□□□ 1.36
LTBP4-224ENST00000599016 ZNF280BQ86YH2 543 aa23.52■■□□□ 1.36
LTBP4-224ENST00000599016 LRRC52Q8N7C0 313 aa23.52■■□□□ 1.36
LTBP4-224ENST00000599016 NEK11Q8NG66 645 aa23.52■■□□□ 1.36
LTBP4-224ENST00000599016 NT5C1BQ96P26 610 aa23.52■■□□□ 1.36
LTBP4-224ENST00000599016 SIK3Q9Y2K2 1263 aa23.52■■□□□ 1.36
LTBP4-224ENST00000599016 INSL6Q9Y581 213 aa23.52■■□□□ 1.36
LTBP4-224ENST00000599016 PIRO00625 290 aa23.51■■□□□ 1.35
LTBP4-224ENST00000599016 DDHD2O94830 711 aa23.51■■□□□ 1.35
LTBP4-224ENST00000599016 SHHQ15465 462 aa23.51■■□□□ 1.35
LTBP4-224ENST00000599016 VSTM4Q8IW00 320 aa23.51■■□□□ 1.35
LTBP4-224ENST00000599016 DRC7Q8IY82 874 aa23.51■■□□□ 1.35
LTBP4-224ENST00000599016 COLGALT2Q8IYK4 626 aa23.51■■□□□ 1.35
LTBP4-224ENST00000599016 LMO3Q8TAP4 145 aa23.51■■□□□ 1.35
LTBP4-224ENST00000599016 CXorf38Q8TB03 319 aa23.51■■□□□ 1.35
LTBP4-224ENST00000599016 HPDLQ96IR7 371 aa23.51■■□□□ 1.35
LTBP4-224ENST00000599016 TMEM175Q9BSA9 504 aa23.51■■□□□ 1.35
LTBP4-224ENST00000599016 NRDE2Q9H7Z3 1164 aa23.51■■□□□ 1.35
LTBP4-224ENST00000599016 RC3H2Q9HBD1 1191 aaKnown RBP23.51■■□□□ 1.35
LTBP4-224ENST00000599016 PLCB1Q9NQ66 1216 aa23.51■■□□□ 1.35
LTBP4-224ENST00000599016 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.51■■□□□ 1.356e-8■□□□□ 9.4
LTBP4-224ENST00000599016 CARNS1A5YM72 827 aa23.5■■□□□ 1.35
LTBP4-224ENST00000599016 STAU1O95793 577 aaKnown RBP23.5■■□□□ 1.35
LTBP4-224ENST00000599016 ASS1P00966 412 aaKnown RBP23.5■■□□□ 1.35
LTBP4-224ENST00000599016 P4HA1P13674 534 aa23.5■■□□□ 1.35
LTBP4-224ENST00000599016 PAX3P23760 479 aa23.5■■□□□ 1.35
LTBP4-224ENST00000599016 CDC25BP30305 580 aa23.5■■□□□ 1.35
LTBP4-224ENST00000599016 OR1G1P47890 313 aa23.5■■□□□ 1.35
LTBP4-224ENST00000599016 TAF6P49848 677 aa23.5■■□□□ 1.35
LTBP4-224ENST00000599016 CLCNKBP51801 687 aa23.5■■□□□ 1.35
LTBP4-224ENST00000599016 HTRA4P83105 476 aaPredicted RBP23.5■■□□□ 1.35
LTBP4-224ENST00000599016 LRMPQ12912 555 aa23.5■■□□□ 1.35
LTBP4-224ENST00000599016 PTPN21Q16825 1174 aa23.5■■□□□ 1.35
LTBP4-224ENST00000599016 UPP1Q16831 310 aa23.5■■□□□ 1.35
LTBP4-224ENST00000599016 SV2CQ496J9 727 aa23.5■■□□□ 1.35
LTBP4-224ENST00000599016 ZNF667Q5HYK9 610 aa23.5■■□□□ 1.35
LTBP4-224ENST00000599016 SPOUT1Q5T280 376 aaKnown RBP23.5■■□□□ 1.35
LTBP4-224ENST00000599016 SPECC1LQ69YQ0 1117 aa23.5■■□□□ 1.35
LTBP4-224ENST00000599016 FAM109BQ6ICB4 259 aaPredicted RBP23.5■■□□□ 1.35
LTBP4-224ENST00000599016 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.5■■□□□ 1.35
LTBP4-224ENST00000599016 TMEM130Q8N3G9 435 aa23.5■■□□□ 1.35
LTBP4-224ENST00000599016 IQCDQ96DY2 449 aa23.5■■□□□ 1.35
LTBP4-224ENST00000599016 RAD9AQ99638 391 aa23.5■■□□□ 1.35
LTBP4-224ENST00000599016 PI4K2AQ9BTU6 479 aa23.5■■□□□ 1.35
LTBP4-224ENST00000599016 NUP58Q9BVL2 599 aa23.5■■□□□ 1.35
LTBP4-224ENST00000599016 DAAM1Q9Y4D1 1078 aa23.5■■□□□ 1.35
LTBP4-224ENST00000599016 ITIH6Q6UXX5 1313 aa23.5■■□□□ 1.35
LTBP4-224ENST00000599016 COL4A6Q14031 1691 aa23.5■■□□□ 1.35
LTBP4-224ENST00000599016 EYSQ5T1H1 3165 aa23.49■■□□□ 1.35
LTBP4-224ENST00000599016 TLL1O43897 1013 aa23.49■■□□□ 1.35
LTBP4-224ENST00000599016 ALDH2P05091 517 aa23.49■■□□□ 1.35
LTBP4-224ENST00000599016 KLK7P49862 253 aa23.49■■□□□ 1.35
LTBP4-224ENST00000599016 NOP14P78316 857 aaKnown RBP23.49■■□□□ 1.35
LTBP4-224ENST00000599016 DCLRE1AQ6PJP8 1040 aa23.49■■□□□ 1.35
LTBP4-224ENST00000599016 FAM81BQ96LP2 452 aa23.49■■□□□ 1.35
LTBP4-224ENST00000599016 COLEC11Q9BWP8 271 aa23.49■■□□□ 1.35
LTBP4-224ENST00000599016 VRTNQ9H8Y1 702 aa23.49■■□□□ 1.35
LTBP4-224ENST00000599016 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.49■■□□□ 1.356e-7■■■■■ 39.4
LTBP4-224ENST00000599016 FAM207AQ9NSI2 230 aaPredicted RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms