RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 ACO2Q99798 780 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-215ENST00000597649 CDT1Q9H211 546 aa18.04■□□□□ 0.48
SHKBP1-215ENST00000597649 FBXL5Q9UKA1 691 aa18.04■□□□□ 0.48
SHKBP1-215ENST00000597649 CDV3Q9UKY7 258 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-215ENST00000597649 SMC3Q9UQE7 1217 aa18.04■□□□□ 0.48
SHKBP1-215ENST00000597649 KIF3AQ9Y496 699 aa18.04■□□□□ 0.48
SHKBP1-215ENST00000597649 CNOT1A5YKK6 2376 aaKnown RBP18.04■□□□□ 0.48
SHKBP1-215ENST00000597649 USP24Q9UPU5 2620 aa18.03■□□□□ 0.48
SHKBP1-215ENST00000597649 GJA1P17302 382 aa18.03■□□□□ 0.48
SHKBP1-215ENST00000597649 GUCY1B3Q02153 619 aa18.03■□□□□ 0.48
SHKBP1-215ENST00000597649 SPEM2Q0P670 501 aa18.03■□□□□ 0.48
SHKBP1-215ENST00000597649 CUL4AQ13619 759 aa18.03■□□□□ 0.48
SHKBP1-215ENST00000597649 TAS1R3Q7RTX0 852 aa18.03■□□□□ 0.48
SHKBP1-215ENST00000597649 IFT74Q96LB3 600 aa18.03■□□□□ 0.48
SHKBP1-215ENST00000597649 CEP72Q9P209 647 aa18.03■□□□□ 0.48
SHKBP1-215ENST00000597649 INSL5Q9Y5Q6 135 aa18.03■□□□□ 0.48
SHKBP1-215ENST00000597649 K7ERI5 159 aa18.02■□□□□ 0.48
SHKBP1-215ENST00000597649 ZNF197O14709 1029 aa18.02■□□□□ 0.48
SHKBP1-215ENST00000597649 CHRNB1P11230 501 aa18.02■□□□□ 0.48
SHKBP1-215ENST00000597649 GDI1P31150 447 aa18.02■□□□□ 0.48
SHKBP1-215ENST00000597649 ANP32AP39687 249 aaKnown RBP18.02■□□□□ 0.48
SHKBP1-215ENST00000597649 DMWDQ09019 674 aa18.02■□□□□ 0.48
SHKBP1-215ENST00000597649 TRIM29Q14134 588 aa18.02■□□□□ 0.48
SHKBP1-215ENST00000597649 PDZD4Q76G19 769 aaPredicted RBP18.02■□□□□ 0.48
SHKBP1-215ENST00000597649 TMEM130Q8N3G9 435 aa18.02■□□□□ 0.48
SHKBP1-215ENST00000597649 FAM3CQ92520 227 aa18.02■□□□□ 0.48
SHKBP1-215ENST00000597649 SMARCD2Q92925 531 aa18.02■□□□□ 0.48
SHKBP1-215ENST00000597649 IRF7Q92985 503 aa18.02■□□□□ 0.48
SHKBP1-215ENST00000597649 RTKNQ9BST9 563 aa18.02■□□□□ 0.48
SHKBP1-215ENST00000597649 BHMT2Q9H2M3 363 aa18.02■□□□□ 0.48
SHKBP1-215ENST00000597649 TRPV5Q9NQA5 729 aa18.02■□□□□ 0.48
SHKBP1-215ENST00000597649 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.02■□□□□ 0.48
SHKBP1-215ENST00000597649 PIAS3Q9Y6X2 628 aa18.02■□□□□ 0.48
SHKBP1-215ENST00000597649 ARNTLO00327 626 aa18.01■□□□□ 0.47
SHKBP1-215ENST00000597649 ABLIM1O14639 778 aa18.01■□□□□ 0.47
SHKBP1-215ENST00000597649 SYN3O14994 580 aa18.01■□□□□ 0.47
SHKBP1-215ENST00000597649 HRO43593 1189 aa18.01■□□□□ 0.47
SHKBP1-215ENST00000597649 KCNE1P15382 129 aa18.01■□□□□ 0.47
SHKBP1-215ENST00000597649 PSMC3P17980 439 aa18.01■□□□□ 0.47
SHKBP1-215ENST00000597649 NPTX2P47972 431 aa18.01■□□□□ 0.47
SHKBP1-215ENST00000597649 NRLP54845 237 aa18.01■□□□□ 0.47
SHKBP1-215ENST00000597649 SATB1Q01826 763 aa18.01■□□□□ 0.47
SHKBP1-215ENST00000597649 WDR44Q5JSH3 913 aa18.01■□□□□ 0.47
SHKBP1-215ENST00000597649 TPGS2Q68CL5 300 aa18.01■□□□□ 0.47
SHKBP1-215ENST00000597649 DAW1Q8N136 415 aa18.01■□□□□ 0.47
SHKBP1-215ENST00000597649 CELF5Q8N6W0 485 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-215ENST00000597649 C4orf32Q8N8J7 132 aa18.01■□□□□ 0.47
SHKBP1-215ENST00000597649 ERMNQ8TAM6 284 aa18.01■□□□□ 0.47
SHKBP1-215ENST00000597649 KIFAP3Q92845 792 aa18.01■□□□□ 0.47
SHKBP1-215ENST00000597649 RSPRY1Q96DX4 576 aa18.01■□□□□ 0.47
SHKBP1-215ENST00000597649 CCDC94Q9BW85 323 aaPredicted RBP18.01■□□□□ 0.47
SHKBP1-215ENST00000597649 TARS2Q9BW92 718 aaKnown RBP18.01■□□□□ 0.47
SHKBP1-215ENST00000597649 TRPV4Q9HBA0 871 aa18.01■□□□□ 0.47
SHKBP1-215ENST00000597649 FOXD4L1Q9NU39 408 aa18.01■□□□□ 0.47
SHKBP1-215ENST00000597649 GMEB2Q9UKD1 530 aa18.01■□□□□ 0.47
SHKBP1-215ENST00000597649 SDK1Q7Z5N4 2213 aa18■□□□□ 0.47
SHKBP1-215ENST00000597649 CEP295Q9C0D2 2601 aa18■□□□□ 0.47
SHKBP1-215ENST00000597649 H7C4K7 107 aa18■□□□□ 0.47
SHKBP1-215ENST00000597649 VNN2O95498 520 aa18■□□□□ 0.47
SHKBP1-215ENST00000597649 OR52Z1P0C646 297 aa18■□□□□ 0.47
SHKBP1-215ENST00000597649 PROZP22891 400 aa18■□□□□ 0.47
SHKBP1-215ENST00000597649 CCNE1P24864 410 aa18■□□□□ 0.47
SHKBP1-215ENST00000597649 GJB2P29033 226 aa18■□□□□ 0.47
SHKBP1-215ENST00000597649 HOXC13P31276 330 aa18■□□□□ 0.47
SHKBP1-215ENST00000597649 YARSP54577 528 aaKnown RBP18■□□□□ 0.47
SHKBP1-215ENST00000597649 EPHA5P54756 1037 aa18■□□□□ 0.47
SHKBP1-215ENST00000597649 PEX3P56589 373 aa18■□□□□ 0.47
SHKBP1-215ENST00000597649 TWF1Q12792 350 aa18■□□□□ 0.47
SHKBP1-215ENST00000597649 CTXN3Q4LDR2 81 aa18■□□□□ 0.47
SHKBP1-215ENST00000597649 CYP4A22Q5TCH4 519 aa18■□□□□ 0.47
SHKBP1-215ENST00000597649 RNF19BQ6ZMZ0 732 aa18■□□□□ 0.47
SHKBP1-215ENST00000597649 INTS4Q96HW7 963 aaKnown RBP18■□□□□ 0.47
SHKBP1-215ENST00000597649 ZBTB45Q96K62 511 aaPredicted RBP18■□□□□ 0.47
SHKBP1-215ENST00000597649 SUSD3Q96L08 255 aa18■□□□□ 0.47
SHKBP1-215ENST00000597649 TOPORSQ9NS56 1045 aaPredicted RBP18■□□□□ 0.47
SHKBP1-215ENST00000597649 SLC38A7Q9NVC3 462 aa18■□□□□ 0.47
SHKBP1-215ENST00000597649 DAXXQ9UER7 740 aaPredicted RBP18■□□□□ 0.47
SHKBP1-215ENST00000597649 KIAA1024Q9UPX6 916 aa18■□□□□ 0.47
SHKBP1-215ENST00000597649 CCDC169A6NNP5 214 aa17.99■□□□□ 0.47
SHKBP1-215ENST00000597649 MYL4P12829 197 aa17.99■□□□□ 0.47
SHKBP1-215ENST00000597649 MUTP22033 750 aa17.99■□□□□ 0.47
SHKBP1-215ENST00000597649 RPL9P32969 192 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-215ENST00000597649 CCT6AP40227 531 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-215ENST00000597649 SRSF5Q13243 272 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-215ENST00000597649 TEAD2Q15562 447 aa17.99■□□□□ 0.47
SHKBP1-215ENST00000597649 ZNF568Q3ZCX4 644 aa17.99■□□□□ 0.47
SHKBP1-215ENST00000597649 LAIR1Q6GTX8 287 aa17.99■□□□□ 0.47
SHKBP1-215ENST00000597649 GPIHBP1Q8IV16 184 aa17.99■□□□□ 0.47
SHKBP1-215ENST00000597649 MFSD6LQ8IWD5 586 aa17.99■□□□□ 0.47
SHKBP1-215ENST00000597649 SHKBP1Q8TBC3 707 aa17.99■□□□□ 0.47
SHKBP1-215ENST00000597649 ZSCAN18Q8TBC5 510 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-215ENST00000597649 ZNF512Q96ME7 567 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-215ENST00000597649 LRRC3Q9BY71 257 aa17.99■□□□□ 0.47
SHKBP1-215ENST00000597649 TMEM134Q9H6X4 195 aa17.99■□□□□ 0.47
SHKBP1-215ENST00000597649 RBM12Q9NTZ6 932 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-215ENST00000597649 C2orf42Q9NWW7 574 aa17.99■□□□□ 0.47
SHKBP1-215ENST00000597649 CNTN3Q9P232 1028 aa17.99■□□□□ 0.47
SHKBP1-215ENST00000597649 AFF4Q9UHB7 1163 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-215ENST00000597649 COL4A2P08572 1712 aa17.98■□□□□ 0.47
SHKBP1-215ENST00000597649 HEPACAM2A8MVW5 462 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms