RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 DDX12PQ92771 950 aa16.52■□□□□ 0.24
TGFB1-202ENST00000597453 KCNN1Q92952 543 aa16.52■□□□□ 0.24
TGFB1-202ENST00000597453 BICD1Q96G01 975 aa16.52■□□□□ 0.24
TGFB1-202ENST00000597453 CALML4Q96GE6 196 aa16.52■□□□□ 0.24
TGFB1-202ENST00000597453 KXD1Q9BQD3 176 aa16.52■□□□□ 0.24
TGFB1-202ENST00000597453 KCNH3Q9ULD8 1083 aa16.52■□□□□ 0.24
TGFB1-202ENST00000597453 MRPS23Q9Y3D9 190 aaKnown RBP16.52■□□□□ 0.24
TGFB1-202ENST00000597453 GVINP1Q7Z2Y8 2422 aa16.52■□□□□ 0.24
TGFB1-202ENST00000597453 SPTBN4Q9H254 2564 aa16.52■□□□□ 0.23
TGFB1-202ENST00000597453 TTC26A0AVF1 554 aa16.51■□□□□ 0.23
TGFB1-202ENST00000597453 PRR23AA6NEV1 266 aa16.51■□□□□ 0.23
TGFB1-202ENST00000597453 H7C4K7 107 aa16.51■□□□□ 0.23
TGFB1-202ENST00000597453 K7ENM7 598 aa16.51■□□□□ 0.23
TGFB1-202ENST00000597453 FAM189A1O60320 539 aa16.51■□□□□ 0.23
TGFB1-202ENST00000597453 CLTAP09496 248 aa16.51■□□□□ 0.23
TGFB1-202ENST00000597453 ATF2P15336 505 aa16.51■□□□□ 0.23
TGFB1-202ENST00000597453 ZNF131P52739 623 aa16.51■□□□□ 0.23
TGFB1-202ENST00000597453 MCM6Q14566 821 aa16.51■□□□□ 0.23
TGFB1-202ENST00000597453 CTXN3Q4LDR2 81 aa16.51■□□□□ 0.23
TGFB1-202ENST00000597453 SPECC1Q5M775 1068 aa16.51■□□□□ 0.23
TGFB1-202ENST00000597453 PHLDB3Q6NSJ2 640 aa16.51■□□□□ 0.23
TGFB1-202ENST00000597453 MYCT1Q8N699 235 aa16.51■□□□□ 0.23
TGFB1-202ENST00000597453 RAD54LQ92698 747 aa16.51■□□□□ 0.23
TGFB1-202ENST00000597453 FOXQ1Q9C009 403 aa16.51■□□□□ 0.23
TGFB1-202ENST00000597453 CYP4F11Q9HBI6 524 aa16.51■□□□□ 0.23
TGFB1-202ENST00000597453 DLGAP2Q9P1A6 1054 aa16.51■□□□□ 0.23
TGFB1-202ENST00000597453 TBX20Q9UMR3 447 aa16.51■□□□□ 0.23
TGFB1-202ENST00000597453 CACNA1IQ9P0X4 2223 aa16.51■□□□□ 0.23
TGFB1-202ENST00000597453 TSC2P49815 1807 aa16.5■□□□□ 0.23
TGFB1-202ENST00000597453 H0YCG3 227 aa16.5■□□□□ 0.23
TGFB1-202ENST00000597453 NRG2O14511 850 aaPredicted RBP16.5■□□□□ 0.23
TGFB1-202ENST00000597453 PRRG1O14668 218 aa16.5■□□□□ 0.23
TGFB1-202ENST00000597453 HNRNPDLO14979 420 aaKnown RBP16.5■□□□□ 0.23
TGFB1-202ENST00000597453 FAM13AO94988 1023 aa16.5■□□□□ 0.23
TGFB1-202ENST00000597453 PIGRP01833 764 aa16.5■□□□□ 0.23
TGFB1-202ENST00000597453 LRG1P02750 347 aa16.5■□□□□ 0.23
TGFB1-202ENST00000597453 DCNP07585 359 aaKnown RBP16.5■□□□□ 0.23
TGFB1-202ENST00000597453 CEBPBP17676 345 aa16.5■□□□□ 0.23
TGFB1-202ENST00000597453 ELF1P32519 619 aa16.5■□□□□ 0.23
TGFB1-202ENST00000597453 LONP1P36776 959 aaKnown RBP16.5■□□□□ 0.23
TGFB1-202ENST00000597453 LIG4P49917 911 aa16.5■□□□□ 0.23
TGFB1-202ENST00000597453 GUCY2FP51841 1108 aa16.5■□□□□ 0.23
TGFB1-202ENST00000597453 BECN1Q14457 450 aa16.5■□□□□ 0.23
TGFB1-202ENST00000597453 ZBTB6Q15916 424 aa16.5■□□□□ 0.23
TGFB1-202ENST00000597453 ZNF280DQ6N043 979 aa16.5■□□□□ 0.23
TGFB1-202ENST00000597453 FAM173BQ6P4H8 233 aa16.5■□□□□ 0.23
TGFB1-202ENST00000597453 SLC39A4Q6P5W5 647 aa16.5■□□□□ 0.23
TGFB1-202ENST00000597453 TCEAL8Q8IYN2 117 aa16.5■□□□□ 0.23
TGFB1-202ENST00000597453 SPRYD3Q8NCJ5 442 aa16.5■□□□□ 0.23
TGFB1-202ENST00000597453 MCRS1Q96EZ8 462 aa16.5■□□□□ 0.23
TGFB1-202ENST00000597453 KIF12Q96FN5 646 aa16.5■□□□□ 0.23
TGFB1-202ENST00000597453 FIZ1Q96SL8 496 aa16.5■□□□□ 0.23
TGFB1-202ENST00000597453 PLEKHA5Q9HAU0 1116 aa16.5■□□□□ 0.23
TGFB1-202ENST00000597453 PARVGQ9HBI0 331 aa16.5■□□□□ 0.23
TGFB1-202ENST00000597453 AVENQ9NQS1 362 aaPredicted RBP16.5■□□□□ 0.23
TGFB1-202ENST00000597453 PCDHB8Q9UN66 801 aa16.5■□□□□ 0.23
TGFB1-202ENST00000597453 INSL5Q9Y5Q6 135 aa16.5■□□□□ 0.23
TGFB1-202ENST00000597453 CLIC4Q9Y696 253 aa16.5■□□□□ 0.23
TGFB1-202ENST00000597453 MORC2Q9Y6X9 1032 aaPredicted RBP16.5■□□□□ 0.23
TGFB1-202ENST00000597453 LACTBL1A8MY62 500 aa16.49■□□□□ 0.23
TGFB1-202ENST00000597453 LRRN2O75325 713 aa16.49■□□□□ 0.23
TGFB1-202ENST00000597453 ZSCAN22P10073 491 aaPredicted RBP16.49■□□□□ 0.23
TGFB1-202ENST00000597453 GLULP15104 373 aa16.49■□□□□ 0.23
TGFB1-202ENST00000597453 PTPN2P17706 415 aa16.49■□□□□ 0.23
TGFB1-202ENST00000597453 LRPAP1P30533 357 aa16.49■□□□□ 0.23
TGFB1-202ENST00000597453 STARD6P59095 220 aa16.49■□□□□ 0.23
TGFB1-202ENST00000597453 PPP2R3AQ06190 1150 aa16.49■□□□□ 0.23
TGFB1-202ENST00000597453 SNW1Q13573 536 aaKnown RBP16.49■□□□□ 0.23
TGFB1-202ENST00000597453 PTPAQ15257 358 aa16.49■□□□□ 0.23
TGFB1-202ENST00000597453 ENOX2Q16206 610 aaKnown RBP16.49■□□□□ 0.23
TGFB1-202ENST00000597453 PRSS36Q5K4E3 855 aa16.49■□□□□ 0.23
TGFB1-202ENST00000597453 USP49Q70CQ1 688 aa16.49■□□□□ 0.23
TGFB1-202ENST00000597453 APPL2Q8NEU8 664 aa16.49■□□□□ 0.23
TGFB1-202ENST00000597453 RASSF8Q8NHQ8 419 aa16.49■□□□□ 0.23
TGFB1-202ENST00000597453 TCEAL4Q96EI5 215 aa16.49■□□□□ 0.23
TGFB1-202ENST00000597453 CORO1BQ9BR76 489 aa16.49■□□□□ 0.23
TGFB1-202ENST00000597453 PLA2G2FQ9BZM2 168 aa16.49■□□□□ 0.23
TGFB1-202ENST00000597453 ZHX3Q9H4I2 956 aa16.49■□□□□ 0.23
TGFB1-202ENST00000597453 UBQLN1Q9UMX0 589 aaKnown RBP16.49■□□□□ 0.23
TGFB1-202ENST00000597453 SIT1Q9Y3P8 196 aa16.49■□□□□ 0.23
TGFB1-202ENST00000597453 TIMM13Q9Y5L4 95 aaPredicted RBP16.49■□□□□ 0.23
TGFB1-202ENST00000597453 FANCMQ8IYD8 2048 aa16.48■□□□□ 0.23
TGFB1-202ENST00000597453 PATJQ8NI35 1801 aa16.48■□□□□ 0.23
TGFB1-202ENST00000597453 M0QZQ0 153 aa16.48■□□□□ 0.23
TGFB1-202ENST00000597453 PPEF2O14830 753 aa16.48■□□□□ 0.23
TGFB1-202ENST00000597453 OGTO15294 1046 aa16.48■□□□□ 0.23
TGFB1-202ENST00000597453 TRAK2O60296 914 aa16.48■□□□□ 0.23
TGFB1-202ENST00000597453 F13A1P00488 732 aa16.48■□□□□ 0.23
TGFB1-202ENST00000597453 KRT18P05783 430 aaKnown RBP16.48■□□□□ 0.23
TGFB1-202ENST00000597453 CYP3A5P20815 502 aa16.48■□□□□ 0.23
TGFB1-202ENST00000597453 NMT1P30419 496 aaKnown RBP16.48■□□□□ 0.23
TGFB1-202ENST00000597453 CCR2P41597 374 aa16.48■□□□□ 0.23
TGFB1-202ENST00000597453 AARSP49588 968 aaKnown RBP eCLIP16.48■□□□□ 0.23
TGFB1-202ENST00000597453 ADCY1Q08828 1119 aa16.48■□□□□ 0.23
TGFB1-202ENST00000597453 TPGS2Q68CL5 300 aa16.48■□□□□ 0.23
TGFB1-202ENST00000597453 RNF19BQ6ZMZ0 732 aa16.48■□□□□ 0.23
TGFB1-202ENST00000597453 PJA1Q8NG27 643 aa16.48■□□□□ 0.23
TGFB1-202ENST00000597453 LARP4BQ92615 738 aaKnown RBP16.48■□□□□ 0.23
TGFB1-202ENST00000597453 NKD2Q969F2 451 aaPredicted RBP16.48■□□□□ 0.23
TGFB1-202ENST00000597453 USP28Q96RU2 1077 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms