RNA–Protein interactions for RNA: ENST00000596957.1

ARHGEF1-214, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-214ENST00000596957 C11orf84Q9BUA3 381 aaPredicted RBP16.13■□□□□ 0.17
ARHGEF1-214ENST00000596957 PLVAPQ9BX97 442 aa16.13■□□□□ 0.17
ARHGEF1-214ENST00000596957 IMPG2Q9BZV3 1241 aa16.13■□□□□ 0.17
ARHGEF1-214ENST00000596957 TAB2Q9NYJ8 693 aa16.13■□□□□ 0.17
ARHGEF1-214ENST00000596957 PUF60Q9UHX1 559 aaKnown RBP16.13■□□□□ 0.17
ARHGEF1-214ENST00000596957 TRAPPC3O43617 180 aa16.12■□□□□ 0.17
ARHGEF1-214ENST00000596957 FGF18O76093 207 aa16.12■□□□□ 0.17
ARHGEF1-214ENST00000596957 PNPLA4P41247 253 aa16.12■□□□□ 0.17
ARHGEF1-214ENST00000596957 ERVK-21P61565 698 aa16.12■□□□□ 0.17
ARHGEF1-214ENST00000596957 KCNH2Q12809 1159 aa16.12■□□□□ 0.17
ARHGEF1-214ENST00000596957 NCOA4Q13772 614 aa16.12■□□□□ 0.17
ARHGEF1-214ENST00000596957 IQCB1Q15051 598 aa16.12■□□□□ 0.17
ARHGEF1-214ENST00000596957 MAN2A1Q16706 1144 aa16.12■□□□□ 0.17
ARHGEF1-214ENST00000596957 SV2CQ496J9 727 aa16.12■□□□□ 0.17
ARHGEF1-214ENST00000596957 C1orf220Q5T0J3 134 aa16.12■□□□□ 0.17
ARHGEF1-214ENST00000596957 DSTYKQ6XUX3 929 aa16.12■□□□□ 0.17
ARHGEF1-214ENST00000596957 SV2AQ7L0J3 742 aa16.12■□□□□ 0.17
ARHGEF1-214ENST00000596957 SLC39A11Q8N1S5 342 aa16.12■□□□□ 0.17
ARHGEF1-214ENST00000596957 KLHL23Q8NBE8 558 aa16.12■□□□□ 0.17
ARHGEF1-214ENST00000596957 IGSF21Q96ID5 467 aa16.12■□□□□ 0.17
ARHGEF1-214ENST00000596957 ADAM28Q9UKQ2 775 aa16.12■□□□□ 0.17
ARHGEF1-214ENST00000596957 F8W810 466 aa16.11■□□□□ 0.17
ARHGEF1-214ENST00000596957 PPEF2O14830 753 aa16.11■□□□□ 0.17
ARHGEF1-214ENST00000596957 CSPG5O95196 566 aa16.11■□□□□ 0.17
ARHGEF1-214ENST00000596957 C4BPAP04003 597 aaKnown RBP16.11■□□□□ 0.17
ARHGEF1-214ENST00000596957 RB1P06400 928 aa16.11■□□□□ 0.17
ARHGEF1-214ENST00000596957 CA8P35219 290 aa16.11■□□□□ 0.17
ARHGEF1-214ENST00000596957 FMO5P49326 533 aa16.11■□□□□ 0.17
ARHGEF1-214ENST00000596957 TAF6P49848 677 aa16.11■□□□□ 0.17
ARHGEF1-214ENST00000596957 KRT31Q15323 416 aa16.11■□□□□ 0.17
ARHGEF1-214ENST00000596957 ZACNQ401N2 412 aa16.11■□□□□ 0.17
ARHGEF1-214ENST00000596957 VWA3BQ502W6 1294 aa16.11■□□□□ 0.17
ARHGEF1-214ENST00000596957 SPRED2Q7Z698 418 aa16.11■□□□□ 0.17
ARHGEF1-214ENST00000596957 LRRC52Q8N7C0 313 aa16.11■□□□□ 0.17
ARHGEF1-214ENST00000596957 FBXL13Q8NEE6 735 aa16.11■□□□□ 0.17
ARHGEF1-214ENST00000596957 HPDLQ96IR7 371 aa16.11■□□□□ 0.17
ARHGEF1-214ENST00000596957 VPS16Q9H269 839 aa16.11■□□□□ 0.17
ARHGEF1-214ENST00000596957 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.11■□□□□ 0.173e-6■■■■■ 133.4
ARHGEF1-214ENST00000596957 SF3B1O75533 1304 aaKnown RBP eCLIP16.11■□□□□ 0.172e-10■■■■■ 68.9
ARHGEF1-214ENST00000596957 COL4A6Q14031 1691 aa16.11■□□□□ 0.17
ARHGEF1-214ENST00000596957 ANO9A1A5B4 782 aa16.1■□□□□ 0.17
ARHGEF1-214ENST00000596957 PIRO00625 290 aa16.1■□□□□ 0.17
ARHGEF1-214ENST00000596957 SERPINC1P01008 464 aa16.1■□□□□ 0.17
ARHGEF1-214ENST00000596957 HLA-DRAP01903 254 aa16.1■□□□□ 0.17
ARHGEF1-214ENST00000596957 ATP1A3P13637 1013 aa16.1■□□□□ 0.17
ARHGEF1-214ENST00000596957 MYL6P60660 151 aa16.1■□□□□ 0.17
ARHGEF1-214ENST00000596957 TNNC1P63316 161 aa16.1■□□□□ 0.17
ARHGEF1-214ENST00000596957 ELAVL2Q12926 359 aaKnown RBP16.1■□□□□ 0.17
ARHGEF1-214ENST00000596957 GPM6BQ13491 265 aa16.1■□□□□ 0.17
ARHGEF1-214ENST00000596957 ZNF699Q32M78 642 aa16.1■□□□□ 0.17
ARHGEF1-214ENST00000596957 FILIP1LQ4L180 1135 aa16.1■□□□□ 0.17
ARHGEF1-214ENST00000596957 CBWD6Q4V339 395 aa16.1■□□□□ 0.17
ARHGEF1-214ENST00000596957 WDR44Q5JSH3 913 aa16.1■□□□□ 0.17
ARHGEF1-214ENST00000596957 CBWD3Q5JTY5 395 aa16.1■□□□□ 0.17
ARHGEF1-214ENST00000596957 CBWD5Q5RIA9 395 aa16.1■□□□□ 0.17
ARHGEF1-214ENST00000596957 ZNF697Q5TEC3 545 aa16.1■□□□□ 0.17
ARHGEF1-214ENST00000596957 KIAA1841Q6NSI8 718 aa16.1■□□□□ 0.17
ARHGEF1-214ENST00000596957 TMEM173Q86WV6 379 aaPredicted RBP16.1■□□□□ 0.17
ARHGEF1-214ENST00000596957 C3orf58Q8NDZ4 430 aa16.1■□□□□ 0.17
ARHGEF1-214ENST00000596957 TAS1R2Q8TE23 839 aa16.1■□□□□ 0.17
ARHGEF1-214ENST00000596957 NDST4Q9H3R1 872 aa16.1■□□□□ 0.17
ARHGEF1-214ENST00000596957 ZNF576Q9H609 170 aa16.1■□□□□ 0.17
ARHGEF1-214ENST00000596957 MARCH5Q9NX47 278 aa16.1■□□□□ 0.17
ARHGEF1-214ENST00000596957 SIX4Q9UIU6 781 aa16.1■□□□□ 0.17
ARHGEF1-214ENST00000596957 ARHGEF37A1IGU5 675 aa16.09■□□□□ 0.17
ARHGEF1-214ENST00000596957 TMEM189-UBE2V1I3L0A0 370 aa16.09■□□□□ 0.17
ARHGEF1-214ENST00000596957 I3L4J1 428 aa16.09■□□□□ 0.17
ARHGEF1-214ENST00000596957 SOX1O00570 391 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF1-214ENST00000596957 CST3P01034 146 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF1-214ENST00000596957 ITGB1P05556 798 aa16.09■□□□□ 0.17
ARHGEF1-214ENST00000596957 LINC00271P0C7V0 271 aa16.09■□□□□ 0.17
ARHGEF1-214ENST00000596957 ZNF18P17022 549 aa16.09■□□□□ 0.17
ARHGEF1-214ENST00000596957 PAX3P23760 479 aa16.09■□□□□ 0.17
ARHGEF1-214ENST00000596957 ATICP31939 592 aa16.09■□□□□ 0.17
ARHGEF1-214ENST00000596957 BRCC3P46736 316 aa16.09■□□□□ 0.17
ARHGEF1-214ENST00000596957 COPB1P53618 953 aaKnown RBP16.09■□□□□ 0.17
ARHGEF1-214ENST00000596957 BMS1Q14692 1282 aaKnown RBP16.09■□□□□ 0.17
ARHGEF1-214ENST00000596957 SGSM1Q2NKQ1 1148 aa16.09■□□□□ 0.17
ARHGEF1-214ENST00000596957 HABP4Q5JVS0 413 aaKnown RBP16.09■□□□□ 0.17
ARHGEF1-214ENST00000596957 FKBP15Q5T1M5 1219 aa16.09■□□□□ 0.17
ARHGEF1-214ENST00000596957 FUT10Q6P4F1 479 aa16.09■□□□□ 0.17
ARHGEF1-214ENST00000596957 CEP57Q86XR8 500 aa16.09■□□□□ 0.17
ARHGEF1-214ENST00000596957 BCL7CQ8WUZ0 217 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF1-214ENST00000596957 LRCH3Q96II8 777 aa16.09■□□□□ 0.17
ARHGEF1-214ENST00000596957 ALG13Q9NP73 1137 aaKnown RBP16.09■□□□□ 0.17
ARHGEF1-214ENST00000596957 RAB20Q9NX57 234 aa16.09■□□□□ 0.17
ARHGEF1-214ENST00000596957 NXF1Q9UBU9 619 aaKnown RBP16.09■□□□□ 0.17
ARHGEF1-214ENST00000596957 STK39Q9UEW8 545 aa16.09■□□□□ 0.17
ARHGEF1-214ENST00000596957 LIMA1Q9UHB6 759 aaKnown RBP16.09■□□□□ 0.17
ARHGEF1-214ENST00000596957 PTPRSQ13332 1948 aa16.09■□□□□ 0.17
ARHGEF1-214ENST00000596957 TMEM265A0A087WTH1 108 aa16.08■□□□□ 0.16
ARHGEF1-214ENST00000596957 KPNA7A9QM74 516 aa16.08■□□□□ 0.16
ARHGEF1-214ENST00000596957 C5orf67F2Z3F1 127 aa16.08■□□□□ 0.16
ARHGEF1-214ENST00000596957 P4HA2O15460 535 aa16.08■□□□□ 0.16
ARHGEF1-214ENST00000596957 LPXNO60711 386 aa16.08■□□□□ 0.16
ARHGEF1-214ENST00000596957 VNN1O95497 513 aa16.08■□□□□ 0.16
ARHGEF1-214ENST00000596957 ODC1P11926 461 aa16.08■□□□□ 0.16
ARHGEF1-214ENST00000596957 P4HA1P13674 534 aa16.08■□□□□ 0.16
ARHGEF1-214ENST00000596957 LILRA4P59901 499 aa16.08■□□□□ 0.16
ARHGEF1-214ENST00000596957 PLCB2Q00722 1185 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms