RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 UVSSAQ2YD98 709 aa14.18□□□□□ -0.14
USE1-207ENST00000596136 VARS2Q5ST30 1063 aaKnown RBP14.18□□□□□ -0.14
USE1-207ENST00000596136 EPM2AIP1Q7L775 607 aaPredicted RBP14.18□□□□□ -0.14
USE1-207ENST00000596136 PLCD3Q8N3E9 789 aa14.18□□□□□ -0.14
USE1-207ENST00000596136 POMGNT1Q8WZA1 660 aa14.18□□□□□ -0.14
USE1-207ENST00000596136 EDAQ92838 391 aa14.18□□□□□ -0.14
USE1-207ENST00000596136 TMEM206Q9H813 350 aa14.18□□□□□ -0.14
USE1-207ENST00000596136 WDR6Q9NNW5 1121 aaKnown RBP14.18□□□□□ -0.14
USE1-207ENST00000596136 KCNH3Q9ULD8 1083 aa14.18□□□□□ -0.14
USE1-207ENST00000596136 C2CD2Q9Y426 696 aa14.18□□□□□ -0.14
USE1-207ENST00000596136 NUB1Q9Y5A7 615 aa14.18□□□□□ -0.14
USE1-207ENST00000596136 DOCK6Q96HP0 2047 aa14.18□□□□□ -0.14
USE1-207ENST00000596136 DOCK8Q8NF50 2099 aa14.18□□□□□ -0.14
USE1-207ENST00000596136 FAM237AA0A1B0GTK4 181 aa14.17□□□□□ -0.14
USE1-207ENST00000596136 ANO9A1A5B4 782 aa14.17□□□□□ -0.14
USE1-207ENST00000596136 SPDYE4A6NLX3 237 aa14.17□□□□□ -0.14
USE1-207ENST00000596136 PRR33A8MZF0 331 aa14.17□□□□□ -0.14
USE1-207ENST00000596136 PIRO00625 290 aa14.17□□□□□ -0.14
USE1-207ENST00000596136 ABLIM3O94929 683 aa14.17□□□□□ -0.14
USE1-207ENST00000596136 HNRNPA1P09651 372 aaKnown RBP eCLIP14.17□□□□□ -0.14
USE1-207ENST00000596136 SLFN14P0C7P3 912 aa14.17□□□□□ -0.14
USE1-207ENST00000596136 KRT85P78386 507 aa14.17□□□□□ -0.14
USE1-207ENST00000596136 JADE1Q6IE81 842 aa14.17□□□□□ -0.14
USE1-207ENST00000596136 CCDC149Q6ZUS6 474 aa14.17□□□□□ -0.14
USE1-207ENST00000596136 UNC13DQ70J99 1090 aa14.17□□□□□ -0.14
USE1-207ENST00000596136 NT5DC4Q86YG4 428 aa14.17□□□□□ -0.14
USE1-207ENST00000596136 TMEM130Q8N3G9 435 aa14.17□□□□□ -0.14
USE1-207ENST00000596136 APPL2Q8NEU8 664 aa14.17□□□□□ -0.14
USE1-207ENST00000596136 BEST2Q8NFU1 509 aa14.17□□□□□ -0.14
USE1-207ENST00000596136 ZNF507Q8TCN5 953 aa14.17□□□□□ -0.14
USE1-207ENST00000596136 SMG7Q92540 1137 aaKnown RBP14.17□□□□□ -0.14
USE1-207ENST00000596136 PCDHB8Q9UN66 801 aa14.17□□□□□ -0.14
USE1-207ENST00000596136 HPSEQ9Y251 543 aa14.17□□□□□ -0.14
USE1-207ENST00000596136 ATP6V1DQ9Y5K8 247 aa14.17□□□□□ -0.14
USE1-207ENST00000596136 CDY1Q9Y6F8 540 aa14.17□□□□□ -0.14
USE1-207ENST00000596136 SCN1AP35498 2009 aa14.16□□□□□ -0.14
USE1-207ENST00000596136 PVALEFA0A1B0GWK0 134 aa14.16□□□□□ -0.14
USE1-207ENST00000596136 H7C4K7 107 aa14.16□□□□□ -0.14
USE1-207ENST00000596136 KIAA0391O15091 583 aaKnown RBP14.16□□□□□ -0.14
USE1-207ENST00000596136 EIF3DO15371 548 aaKnown RBP eCLIP14.16□□□□□ -0.14
USE1-207ENST00000596136 PRPF6O94906 941 aaKnown RBP14.16□□□□□ -0.14
USE1-207ENST00000596136 OAZ2O95190 189 aa14.16□□□□□ -0.14
USE1-207ENST00000596136 IL18RAPO95256 599 aa14.16□□□□□ -0.14
USE1-207ENST00000596136 LDHAP00338 332 aaKnown RBP14.16□□□□□ -0.14
USE1-207ENST00000596136 NFICP08651 508 aa14.16□□□□□ -0.14
USE1-207ENST00000596136 MCM4P33991 863 aa14.16□□□□□ -0.14
USE1-207ENST00000596136 HOXD13P35453 343 aa14.16□□□□□ -0.14
USE1-207ENST00000596136 ASIC1P78348 528 aa14.16□□□□□ -0.14
USE1-207ENST00000596136 ZXDAP98168 799 aa14.16□□□□□ -0.14
USE1-207ENST00000596136 BECN1Q14457 450 aa14.16□□□□□ -0.14
USE1-207ENST00000596136 TMEM132DQ14C87 1099 aa14.16□□□□□ -0.14
USE1-207ENST00000596136 PTPN21Q16825 1174 aa14.16□□□□□ -0.14
USE1-207ENST00000596136 STXBP4Q6ZWJ1 553 aa14.16□□□□□ -0.14
USE1-207ENST00000596136 OTOP3Q7RTS5 596 aa14.16□□□□□ -0.14
USE1-207ENST00000596136 GLIS3Q8NEA6 775 aa14.16□□□□□ -0.14
USE1-207ENST00000596136 ZNF461Q8TAF7 563 aa14.16□□□□□ -0.14
USE1-207ENST00000596136 SPATA32Q96LK8 384 aa14.16□□□□□ -0.14
USE1-207ENST00000596136 TSHZ2Q9NRE2 1034 aa14.16□□□□□ -0.14
USE1-207ENST00000596136 USP25Q9UHP3 1055 aa14.16□□□□□ -0.14
USE1-207ENST00000596136 FAM86C2PA6NEL3 165 aa14.15□□□□□ -0.14
USE1-207ENST00000596136 PPEF2O14830 753 aa14.15□□□□□ -0.14
USE1-207ENST00000596136 ACTN4O43707 911 aaKnown RBP14.15□□□□□ -0.14
USE1-207ENST00000596136 N4BP1O75113 896 aaKnown RBP14.15□□□□□ -0.14
USE1-207ENST00000596136 C8AP07357 584 aa14.15□□□□□ -0.14
USE1-207ENST00000596136 GUCY2FP51841 1108 aa14.15□□□□□ -0.14
USE1-207ENST00000596136 LILRA4P59901 499 aa14.15□□□□□ -0.14
USE1-207ENST00000596136 ROR1Q01973 937 aa14.15□□□□□ -0.14
USE1-207ENST00000596136 FAM26FQ5R3K3 315 aa14.15□□□□□ -0.14
USE1-207ENST00000596136 C9orf57Q5W0N0 161 aa14.15□□□□□ -0.14
USE1-207ENST00000596136 TPGS2Q68CL5 300 aa14.15□□□□□ -0.14
USE1-207ENST00000596136 BRSK2Q8IWQ3 736 aa14.15□□□□□ -0.14
USE1-207ENST00000596136 SYCP3Q8IZU3 236 aa14.15□□□□□ -0.14
USE1-207ENST00000596136 TDRD5Q8NAT2 981 aaKnown RBP14.15□□□□□ -0.14
USE1-207ENST00000596136 ZSWIM2Q8NEG5 633 aa14.15□□□□□ -0.14
USE1-207ENST00000596136 HPS3Q969F9 1004 aa14.15□□□□□ -0.14
USE1-207ENST00000596136 ACSF2Q96CM8 615 aaPredicted RBP14.15□□□□□ -0.14
USE1-207ENST00000596136 FAM212AQ96EL1 285 aa14.15□□□□□ -0.14
USE1-207ENST00000596136 CHAMP1Q96JM3 812 aa14.15□□□□□ -0.14
USE1-207ENST00000596136 CBWD1Q9BRT8 395 aa14.15□□□□□ -0.14
USE1-207ENST00000596136 OXCT2Q9BYC2 517 aaPredicted RBP14.15□□□□□ -0.14
USE1-207ENST00000596136 SCAND2PQ9GZW5 306 aaPredicted RBP14.15□□□□□ -0.14
USE1-207ENST00000596136 FBXL5Q9UKA1 691 aa14.15□□□□□ -0.14
USE1-207ENST00000596136 MAFFQ9ULX9 164 aa14.15□□□□□ -0.14
USE1-207ENST00000596136 CLUHO75153 1309 aa14.15□□□□□ -0.15
USE1-207ENST00000596136 NOTCH4Q99466 2003 aa14.14□□□□□ -0.15
USE1-207ENST00000596136 ARHGEF37A1IGU5 675 aa14.14□□□□□ -0.15
USE1-207ENST00000596136 WDR27A2RRH5 827 aa14.14□□□□□ -0.15
USE1-207ENST00000596136 EXTL3O43909 919 aa14.14□□□□□ -0.15
USE1-207ENST00000596136 ATF2P15336 505 aa14.14□□□□□ -0.15
USE1-207ENST00000596136 PFKFB1P16118 471 aa14.14□□□□□ -0.15
USE1-207ENST00000596136 TYMPP19971 482 aa14.14□□□□□ -0.15
USE1-207ENST00000596136 SP100P23497 879 aaPredicted RBP14.14□□□□□ -0.15
USE1-207ENST00000596136 SNRPFP62306 86 aaKnown RBP14.14□□□□□ -0.15
USE1-207ENST00000596136 CUL4BQ13620 913 aa14.14□□□□□ -0.15
USE1-207ENST00000596136 BMT2Q1RMZ1 405 aa14.14□□□□□ -0.15
USE1-207ENST00000596136 PPM1LQ5SGD2 360 aa14.14□□□□□ -0.15
USE1-207ENST00000596136 LIN9Q5TKA1 542 aa14.14□□□□□ -0.15
USE1-207ENST00000596136 ZNF280DQ6N043 979 aa14.14□□□□□ -0.15
USE1-207ENST00000596136 TRIM67Q6ZTA4 783 aa14.14□□□□□ -0.15
USE1-207ENST00000596136 BMP8AQ7Z5Y6 402 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms