RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 EIF4BP23588 611 aaKnown RBP3.48□□□□□ -1.85
VRK3-204ENST00000593912 OR1D2P34982 312 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 DPP6P42658 865 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 VASPP50552 380 aaPredicted RBP3.48□□□□□ -1.85
VRK3-204ENST00000593912 GALK1P51570 392 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 OXCT1P55809 520 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 CTDSPL2Q05D32 466 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 SRSF6Q13247 344 aaKnown RBP3.48□□□□□ -1.85
VRK3-204ENST00000593912 RALBP1Q15311 655 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 ITPRIPL2Q3MIP1 535 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 ZSCAN23Q3MJ62 389 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 CCDC81Q6ZN84 652 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 MAMDC2Q7Z304 686 aaPredicted RBP3.48□□□□□ -1.85
VRK3-204ENST00000593912 AACSQ86V21 672 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 ADGRF4Q8IZF3 695 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 RGL4Q8IZJ4 473 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 LRRC71Q8N4P6 559 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 SMARCC2Q8TAQ2 1214 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 LNX1Q8TBB1 728 aaPredicted RBP3.48□□□□□ -1.85
VRK3-204ENST00000593912 HMGB4Q8WW32 186 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 SSH1Q8WYL5 1049 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 ACDQ96AP0 544 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 VCPIP1Q96JH7 1222 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 ZFRQ96KR1 1074 aaKnown RBP3.48□□□□□ -1.85
VRK3-204ENST00000593912 HSPA12BQ96MM6 686 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 STRBPQ96SI9 672 aaKnown RBP3.48□□□□□ -1.85
VRK3-204ENST00000593912 SENP7Q9BQF6 1050 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 POLR3CQ9BUI4 534 aaPredicted RBP3.48□□□□□ -1.85
VRK3-204ENST00000593912 BCL11AQ9H165 835 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 RSAD1Q9HA92 442 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 ZNF287Q9HBT7 754 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 VAT1LQ9HCJ6 419 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 ZDHHC4Q9NPG8 344 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 HPS4Q9NQG7 708 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 FAM105AQ9NUU6 356 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 MIOSQ9NXC5 875 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 DACT1Q9NYF0 836 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 BCCIPQ9P287 314 aaKnown RBP eCLIP3.48□□□□□ -1.85
VRK3-204ENST00000593912 DKK3Q9UBP4 350 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 PIN4Q9Y237 131 aaKnown RBP3.48□□□□□ -1.85
VRK3-204ENST00000593912 AKT3Q9Y243 479 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 PCDHB1Q9Y5F3 818 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 STAB1Q9NY15 2570 aa3.48□□□□□ -1.85
VRK3-204ENST00000593912 UBE4BO95155 1302 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 PHLPP2Q6ZVD8 1323 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 RP1L1Q8IWN7 2480 aaPredicted RBP3.47□□□□□ -1.85
VRK3-204ENST00000593912 A0A1W2PQD8 194 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 KCNK3O14649 394 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 ZNF197O14709 1029 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 EFSO43281 561 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 MTSS1O43312 755 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 RANBP6O60518 1105 aaKnown RBP3.47□□□□□ -1.85
VRK3-204ENST00000593912 PPFIA2O75334 1257 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 SURF6O75683 361 aaKnown RBP3.47□□□□□ -1.85
VRK3-204ENST00000593912 BCAR3O75815 825 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 PRAMEF12O95522 483 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 SNHG28P0DPA3 235 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 TOP1P11387 765 aaKnown RBP3.47□□□□□ -1.85
VRK3-204ENST00000593912 DARSP14868 501 aaKnown RBP3.47□□□□□ -1.85
VRK3-204ENST00000593912 ARSAP15289 507 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 MATKP42679 507 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 NOVP48745 357 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 SCNN1GP51170 649 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 STAT5BP51692 787 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 FOSBP53539 338 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 IL9RQ01113 521 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 GHRHRQ02643 423 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 CREMQ03060 361 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 PPARAQ07869 468 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 DSC1Q08554 894 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 CLCA4Q14CN2 919 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 HLA-BQ31612 363 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 ARHGAP29Q52LW3 1261 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 FHL5Q5TD97 284 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 FAM171A1Q5VUB5 890 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 FBXL19Q6PCT2 694 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 KDM7AQ6ZMT4 941 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 DBX2Q6ZNG2 339 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 FAM43BQ6ZT52 329 aaPredicted RBP3.47□□□□□ -1.85
VRK3-204ENST00000593912 HAUS6Q7Z4H7 955 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 RABEPKQ7Z6M1 372 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 SFTPA1Q8IWL2 248 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 PGBD3Q8N328 593 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 ZCCHC9Q8N567 271 aaKnown RBP3.47□□□□□ -1.85
VRK3-204ENST00000593912 TRIML1Q8N9V2 468 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 SHKBP1Q8TBC3 707 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 ZNF564Q8TBZ8 553 aaPredicted RBP3.47□□□□□ -1.85
VRK3-204ENST00000593912 MIB2Q96AX9 1013 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 ERLEC1Q96DZ1 483 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 SCLT1Q96NL6 688 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 PAAF1Q9BRP4 392 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 AMNQ9BXJ7 453 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 UNKQ9C0B0 810 aaKnown RBP3.47□□□□□ -1.85
VRK3-204ENST00000593912 MAF1Q9H063 256 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 SMG9Q9H0W8 520 aaKnown RBP3.47□□□□□ -1.85
VRK3-204ENST00000593912 SLC25A18Q9H1K4 315 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 EBF3Q9H4W6 596 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 AZI2Q9H6S1 392 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 CD93Q9NPY3 652 aa3.47□□□□□ -1.85
VRK3-204ENST00000593912 GKN1Q9NS71 199 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms