RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 ZBTB6Q15916 424 aa20.56■□□□□ 0.88
CCDC43-205ENST00000592333 CTXN3Q4LDR2 81 aa20.56■□□□□ 0.88
CCDC43-205ENST00000592333 FRMD5Q7Z6J6 570 aa20.56■□□□□ 0.88
CCDC43-205ENST00000592333 PJA1Q8NG27 643 aa20.56■□□□□ 0.88
CCDC43-205ENST00000592333 DDX12PQ92771 950 aa20.56■□□□□ 0.88
CCDC43-205ENST00000592333 C18orf25Q96B23 403 aaPredicted RBP20.56■□□□□ 0.88
CCDC43-205ENST00000592333 TBC1D32Q96NH3 1257 aa20.56■□□□□ 0.88
CCDC43-205ENST00000592333 NELL2Q99435 816 aa20.56■□□□□ 0.88
CCDC43-205ENST00000592333 RPP25Q9BUL9 199 aaKnown RBP20.56■□□□□ 0.88
CCDC43-205ENST00000592333 PARVGQ9HBI0 331 aa20.56■□□□□ 0.88
CCDC43-205ENST00000592333 HCFC1R1Q9NWW0 138 aa20.56■□□□□ 0.88
CCDC43-205ENST00000592333 AFF4Q9UHB7 1163 aaKnown RBP20.56■□□□□ 0.88
CCDC43-205ENST00000592333 DOCK6Q96HP0 2047 aa20.55■□□□□ 0.88
CCDC43-205ENST00000592333 NOTCH4Q99466 2003 aa20.55■□□□□ 0.88
CCDC43-205ENST00000592333 KANSL1LA0AUZ9 987 aa20.55■□□□□ 0.88
CCDC43-205ENST00000592333 AARSP49588 968 aaKnown RBP eCLIP20.55■□□□□ 0.88
CCDC43-205ENST00000592333 POU5F1Q01860 360 aaKnown RBP20.55■□□□□ 0.88
CCDC43-205ENST00000592333 ELMOD1Q8N336 334 aa20.55■□□□□ 0.88
CCDC43-205ENST00000592333 ELSPBP1Q96BH3 223 aa20.55■□□□□ 0.88
CCDC43-205ENST00000592333 BICD1Q96G01 975 aa20.55■□□□□ 0.88
CCDC43-205ENST00000592333 CYP4F11Q9HBI6 524 aa20.55■□□□□ 0.88
CCDC43-205ENST00000592333 TBX20Q9UMR3 447 aa20.55■□□□□ 0.88
CCDC43-205ENST00000592333 RIF1Q5UIP0 2472 aaKnown RBP20.54■□□□□ 0.88
CCDC43-205ENST00000592333 PDCD11Q14690 1871 aaKnown RBP20.54■□□□□ 0.88
CCDC43-205ENST00000592333 CXCL8P10145 99 aa20.54■□□□□ 0.88
CCDC43-205ENST00000592333 HARSP12081 509 aaKnown RBP20.54■□□□□ 0.88
CCDC43-205ENST00000592333 MATR3P43243 847 aaKnown RBP eCLIP20.54■□□□□ 0.88
CCDC43-205ENST00000592333 LIG4P49917 911 aa20.54■□□□□ 0.88
CCDC43-205ENST00000592333 PPP2R3AQ06190 1150 aa20.54■□□□□ 0.88
CCDC43-205ENST00000592333 MLF2Q15773 248 aaPredicted RBP20.54■□□□□ 0.88
CCDC43-205ENST00000592333 SLC44A4Q53GD3 710 aa20.54■□□□□ 0.88
CCDC43-205ENST00000592333 PRSS36Q5K4E3 855 aa20.54■□□□□ 0.88
CCDC43-205ENST00000592333 ZC3H14Q6PJT7 736 aaKnown RBP20.54■□□□□ 0.88
CCDC43-205ENST00000592333 C1orf210Q8IVY1 113 aa20.54■□□□□ 0.88
CCDC43-205ENST00000592333 BEST2Q8NFU1 509 aa20.54■□□□□ 0.88
CCDC43-205ENST00000592333 PLIN2Q99541 437 aa20.54■□□□□ 0.88
CCDC43-205ENST00000592333 REEP2Q9BRK0 252 aa20.54■□□□□ 0.88
CCDC43-205ENST00000592333 INSL5Q9Y5Q6 135 aa20.54■□□□□ 0.88
CCDC43-205ENST00000592333 MYH15Q9Y2K3 1946 aa20.54■□□□□ 0.88
CCDC43-205ENST00000592333 HNRNPDLO14979 420 aaKnown RBP20.53■□□□□ 0.88
CCDC43-205ENST00000592333 OGTO15294 1046 aa20.53■□□□□ 0.88
CCDC43-205ENST00000592333 TRAK2O60296 914 aa20.53■□□□□ 0.88
CCDC43-205ENST00000592333 CD2BP2O95400 341 aaKnown RBP20.53■□□□□ 0.88
CCDC43-205ENST00000592333 GTF2BQ00403 316 aa20.53■□□□□ 0.88
CCDC43-205ENST00000592333 YWHAHQ04917 246 aaPredicted RBP20.53■□□□□ 0.88
CCDC43-205ENST00000592333 CYP4A22Q5TCH4 519 aa20.53■□□□□ 0.88
CCDC43-205ENST00000592333 IQCEQ6IPM2 695 aa20.53■□□□□ 0.88
CCDC43-205ENST00000592333 GPBP1Q86WP2 473 aa20.53■□□□□ 0.88
CCDC43-205ENST00000592333 MYCT1Q8N699 235 aa20.53■□□□□ 0.88
CCDC43-205ENST00000592333 DNASE1L2Q92874 299 aa20.53■□□□□ 0.88
CCDC43-205ENST00000592333 ZNF512Q96ME7 567 aaPredicted RBP20.53■□□□□ 0.88
CCDC43-205ENST00000592333 CCSER1Q9C0I3 900 aa20.53■□□□□ 0.88
CCDC43-205ENST00000592333 GPR88Q9GZN0 384 aa20.53■□□□□ 0.88
CCDC43-205ENST00000592333 ST6GALNAC4Q9H4F1 302 aa20.53■□□□□ 0.88
CCDC43-205ENST00000592333 CFAP54Q96N23 3096 aa20.53■□□□□ 0.88
CCDC43-205ENST00000592333 PTPRZ1P23471 2315 aaPredicted RBP20.53■□□□□ 0.88
CCDC43-205ENST00000592333 DMDP11532 3685 aa20.52■□□□□ 0.88
CCDC43-205ENST00000592333 A0A0B4J269 797 aa20.52■□□□□ 0.88
CCDC43-205ENST00000592333 OR6C75A6NL08 312 aa20.52■□□□□ 0.88
CCDC43-205ENST00000592333 FAM189A1O60320 539 aa20.52■□□□□ 0.88
CCDC43-205ENST00000592333 FAM13AO94988 1023 aa20.52■□□□□ 0.88
CCDC43-205ENST00000592333 TYMPP19971 482 aa20.52■□□□□ 0.88
CCDC43-205ENST00000592333 PDCP20941 246 aa20.52■□□□□ 0.88
CCDC43-205ENST00000592333 EPHA5P54756 1037 aa20.52■□□□□ 0.88
CCDC43-205ENST00000592333 PLD1Q13393 1074 aa20.52■□□□□ 0.88
CCDC43-205ENST00000592333 SLC5A9Q2M3M2 681 aa20.52■□□□□ 0.88
CCDC43-205ENST00000592333 ZNF528Q3MIS6 628 aa20.52■□□□□ 0.88
CCDC43-205ENST00000592333 PDZD4Q76G19 769 aaPredicted RBP20.52■□□□□ 0.88
CCDC43-205ENST00000592333 RAD54LQ92698 747 aa20.52■□□□□ 0.88
CCDC43-205ENST00000592333 KIF12Q96FN5 646 aa20.52■□□□□ 0.88
CCDC43-205ENST00000592333 BCO2Q9BYV7 579 aa20.52■□□□□ 0.88
CCDC43-205ENST00000592333 HAPLN2Q9GZV7 340 aa20.52■□□□□ 0.88
CCDC43-205ENST00000592333 RPF1Q9H9Y2 349 aaKnown RBP20.52■□□□□ 0.88
CCDC43-205ENST00000592333 TRPV5Q9NQA5 729 aa20.52■□□□□ 0.88
CCDC43-205ENST00000592333 BLOC1S4Q9NUP1 217 aa20.52■□□□□ 0.88
CCDC43-205ENST00000592333 HSFX1Q9UBD0 423 aa20.52■□□□□ 0.88
CCDC43-205ENST00000592333 TUBGCP4Q9UGJ1 667 aa20.52■□□□□ 0.88
CCDC43-205ENST00000592333 DERAQ9Y315 318 aa20.52■□□□□ 0.88
CCDC43-205ENST00000592333 FAM186AA6NE01 2351 aa20.52■□□□□ 0.88
CCDC43-205ENST00000592333 NPHP3-ACAD11A0A0J9YXS1 232 aa20.51■□□□□ 0.87
CCDC43-205ENST00000592333 NCAM2O15394 837 aa20.51■□□□□ 0.87
CCDC43-205ENST00000592333 SEC24AO95486 1093 aa20.51■□□□□ 0.87
CCDC43-205ENST00000592333 DCNP07585 359 aaKnown RBP20.51■□□□□ 0.87
CCDC43-205ENST00000592333 DDIT3P35638 169 aa20.51■□□□□ 0.87
CCDC43-205ENST00000592333 ARPP19P56211 112 aa20.51■□□□□ 0.87
CCDC43-205ENST00000592333 ADCY1Q08828 1119 aa20.51■□□□□ 0.87
CCDC43-205ENST00000592333 SNW1Q13573 536 aaKnown RBP20.51■□□□□ 0.87
CCDC43-205ENST00000592333 SEZ6Q53EL9 994 aa20.51■□□□□ 0.87
CCDC43-205ENST00000592333 SLFN12LQ6IEE8 588 aa20.51■□□□□ 0.87
CCDC43-205ENST00000592333 MAP4K3Q8IVH8 894 aa20.51■□□□□ 0.87
CCDC43-205ENST00000592333 MCRS1Q96EZ8 462 aa20.51■□□□□ 0.87
CCDC43-205ENST00000592333 KXD1Q9BQD3 176 aa20.51■□□□□ 0.87
CCDC43-205ENST00000592333 CORO1BQ9BR76 489 aa20.51■□□□□ 0.87
CCDC43-205ENST00000592333 ZFP14Q9HCL3 533 aa20.51■□□□□ 0.87
CCDC43-205ENST00000592333 MRPS17Q9Y2R5 130 aaKnown RBP20.51■□□□□ 0.87
CCDC43-205ENST00000592333 VPS13AQ96RL7 3174 aa20.51■□□□□ 0.87
CCDC43-205ENST00000592333 LACTBL1A8MY62 500 aa20.5■□□□□ 0.87
CCDC43-205ENST00000592333 K7ENM7 598 aa20.5■□□□□ 0.87
CCDC43-205ENST00000592333 TBCAO75347 108 aaKnown RBP20.5■□□□□ 0.87
CCDC43-205ENST00000592333 KRT18P05783 430 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms