RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 PAN2Q504Q3 1202 aaKnown RBP7□□□□□ -1.29
VPS4B-205ENST00000591383 ZC2HC1CQ53FD0 456 aaPredicted RBP7□□□□□ -1.29
VPS4B-205ENST00000591383 ATF7IP2Q5U623 682 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7□□□□□ -1.29
VPS4B-205ENST00000591383 C16orf59Q7L2K0 433 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 NELFCDQ8IXH7 590 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 TDHQ8IZJ6 230 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 SYCP3Q8IZU3 236 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 SLC17A8Q8NDX2 589 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 C3orf58Q8NDZ4 430 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 ENGASEQ8NFI3 743 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 GPT2Q8TD30 523 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 HERVK_113Q902F9 699 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 VWCEQ96DN2 955 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 CCDC51Q96ER9 411 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 ADPGKQ9BRR6 497 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 CRISPLD1Q9H336 500 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 CLSTN2Q9H4D0 955 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 NXF3Q9H4D5 531 aaKnown RBP7□□□□□ -1.29
VPS4B-205ENST00000591383 PDZD7Q9H5P4 517 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 RUBCNLQ9H714 662 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 SLC39A2Q9NP94 309 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 OLFML3Q9NRN5 406 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 C1orf112Q9NSG2 853 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 SQORQ9Y6N5 450 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 NLRC5Q86WI3 1866 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 UBE4BO95155 1302 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 COL4A6Q14031 1691 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 CITO14578 2027 aa7□□□□□ -1.29
VPS4B-205ENST00000591383 PDCD11Q14690 1871 aaKnown RBP6.99□□□□□ -1.29
VPS4B-205ENST00000591383 FNDC1Q4ZHG4 1894 aaPredicted RBP6.99□□□□□ -1.29
VPS4B-205ENST00000591383 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.99□□□□□ -1.29
VPS4B-205ENST00000591383 TLDC2A0PJX2 215 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 TISP43B9A030 160 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 BIN1O00499 593 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 PRPF6O94906 941 aaKnown RBP6.99□□□□□ -1.29
VPS4B-205ENST00000591383 FGFR1P11362 822 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 SARSP49591 514 aaKnown RBP6.99□□□□□ -1.29
VPS4B-205ENST00000591383 GATMP50440 423 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 RAB27AP51159 221 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 POU5F1BQ06416 359 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 ALCAMQ13740 583 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 NOLC1Q14978 699 aaKnown RBP eCLIP6.99□□□□□ -1.29
VPS4B-205ENST00000591383 PCBP1Q15365 356 aaKnown RBP eCLIP6.99□□□□□ -1.29
VPS4B-205ENST00000591383 DCAF4L1Q3SXM0 396 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 PEAR1Q5VY43 1037 aaPredicted RBP6.99□□□□□ -1.29
VPS4B-205ENST00000591383 EEF1DP3Q658K8 133 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 FAM109BQ6ICB4 259 aaPredicted RBP6.99□□□□□ -1.29
VPS4B-205ENST00000591383 MRPL14Q6P1L8 145 aaKnown RBP6.99□□□□□ -1.29
VPS4B-205ENST00000591383 CNNM4Q6P4Q7 775 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 SLC27A1Q6PCB7 646 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 APBB1IPQ7Z5R6 666 aaPredicted RBP6.99□□□□□ -1.29
VPS4B-205ENST00000591383 MAP4K3Q8IVH8 894 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 SMYD4Q8IYR2 804 aaPredicted RBP6.99□□□□□ -1.29
VPS4B-205ENST00000591383 HACE1Q8IYU2 909 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 LPPQ93052 612 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 HVCN1Q96D96 273 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 TIGD1Q96MW7 591 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 ACCSQ96QU6 501 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 FIZ1Q96SL8 496 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 SLC9A7Q96T83 725 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 YME1L1Q96TA2 773 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 TCHPQ9BT92 498 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 SPON2Q9BUD6 331 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 TARS2Q9BW92 718 aaKnown RBP6.99□□□□□ -1.29
VPS4B-205ENST00000591383 EIF2AQ9BY44 585 aaKnown RBP6.99□□□□□ -1.29
VPS4B-205ENST00000591383 CDT1Q9H211 546 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 IKZF4Q9H2S9 585 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 GPAMQ9HCL2 828 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 LATS2Q9NRM7 1088 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 FAM105AQ9NUU6 356 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 RMND1Q9NWS8 449 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 KCNG1Q9UIX4 513 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 TBX20Q9UMR3 447 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 EXOC7Q9UPT5 735 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 GDAQ9Y2T3 454 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 HES2Q9Y543 173 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 TTC3P53804 2025 aa6.99□□□□□ -1.29
VPS4B-205ENST00000591383 TDRD15B5MCY1 1934 aaKnown RBP6.99□□□□□ -1.29
VPS4B-205ENST00000591383 PVALEFA0A1B0GWK0 134 aa6.98□□□□□ -1.29
VPS4B-205ENST00000591383 FIGNL2A6NMB9 653 aa6.98□□□□□ -1.29
VPS4B-205ENST00000591383 TTLL8A6PVC2 850 aa6.98□□□□□ -1.29
VPS4B-205ENST00000591383 ACKR2O00590 384 aa6.98□□□□□ -1.29
VPS4B-205ENST00000591383 EIF3DO15371 548 aaKnown RBP eCLIP6.98□□□□□ -1.29
VPS4B-205ENST00000591383 KLRC4O43908 158 aa6.98□□□□□ -1.29
VPS4B-205ENST00000591383 SASH3O75995 380 aa6.98□□□□□ -1.29
VPS4B-205ENST00000591383 STAG3L1P0CL83 205 aa6.98□□□□□ -1.29
VPS4B-205ENST00000591383 ITGA4P13612 1032 aa6.98□□□□□ -1.29
VPS4B-205ENST00000591383 EDN3P14138 238 aa6.98□□□□□ -1.29
VPS4B-205ENST00000591383 PTMSP20962 102 aa6.98□□□□□ -1.29
VPS4B-205ENST00000591383 SCP2P22307 547 aa6.98□□□□□ -1.29
VPS4B-205ENST00000591383 AXLP30530 894 aa6.98□□□□□ -1.29
VPS4B-205ENST00000591383 ABCD1P33897 745 aa6.98□□□□□ -1.29
VPS4B-205ENST00000591383 RABGGTBP53611 331 aa6.98□□□□□ -1.29
VPS4B-205ENST00000591383 OSTNP61366 133 aa6.98□□□□□ -1.29
VPS4B-205ENST00000591383 FAM187BQ17R55 369 aa6.98□□□□□ -1.29
VPS4B-205ENST00000591383 NT5DC1Q5TFE4 455 aa6.98□□□□□ -1.29
VPS4B-205ENST00000591383 SAMD5Q5TGI4 173 aa6.98□□□□□ -1.29
VPS4B-205ENST00000591383 ISM2Q6H9L7 571 aa6.98□□□□□ -1.29
VPS4B-205ENST00000591383 CAVIN1Q6NZI2 390 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms