RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 ALG13Q9NP73 1137 aaKnown RBP16.73■□□□□ 0.27
MBD1-222ENST00000590208 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.73■□□□□ 0.27
MBD1-222ENST00000590208 MROH7Q68CQ1 1323 aa16.72■□□□□ 0.27
MBD1-222ENST00000590208 A0A0G2JND7 137 aa16.72■□□□□ 0.27
MBD1-222ENST00000590208 C2CD2LO14523 706 aa16.72■□□□□ 0.27
MBD1-222ENST00000590208 TBX3O15119 743 aa16.72■□□□□ 0.27
MBD1-222ENST00000590208 GSC2O15499 205 aa16.72■□□□□ 0.27
MBD1-222ENST00000590208 LMNAP02545 664 aaKnown RBP16.72■□□□□ 0.27
MBD1-222ENST00000590208 BMP3P12645 472 aa16.72■□□□□ 0.27
MBD1-222ENST00000590208 CAV1Q03135 178 aa16.72■□□□□ 0.27
MBD1-222ENST00000590208 PDCD2Q16342 344 aaPredicted RBP16.72■□□□□ 0.27
MBD1-222ENST00000590208 P3H1Q32P28 736 aa16.72■□□□□ 0.27
MBD1-222ENST00000590208 SH3TC2Q8TF17 1288 aa16.72■□□□□ 0.27
MBD1-222ENST00000590208 HSD17B14Q9BPX1 270 aa16.72■□□□□ 0.27
MBD1-222ENST00000590208 WRAP73Q9P2S5 460 aaPredicted RBP16.72■□□□□ 0.27
MBD1-222ENST00000590208 LNPEPQ9UIQ6 1025 aa16.72■□□□□ 0.27
MBD1-222ENST00000590208 WASF2Q9Y6W5 498 aa16.72■□□□□ 0.27
MBD1-222ENST00000590208 PRPF4O43172 522 aaKnown RBP eCLIP16.72■□□□□ 0.275e-14■■■■□ 26.3
MBD1-222ENST00000590208 ZCCHC18P0CG32 403 aa16.72■□□□□ 0.27
MBD1-222ENST00000590208 MAPK4P31152 587 aa16.72■□□□□ 0.27
MBD1-222ENST00000590208 ZNF76P36508 570 aa16.72■□□□□ 0.27
MBD1-222ENST00000590208 OCRLQ01968 901 aa16.72■□□□□ 0.27
MBD1-222ENST00000590208 C1orf220Q5T0J3 134 aa16.72■□□□□ 0.27
MBD1-222ENST00000590208 MOXD1Q6UVY6 613 aa16.72■□□□□ 0.27
MBD1-222ENST00000590208 RGS9BPQ6ZS82 235 aa16.72■□□□□ 0.27
MBD1-222ENST00000590208 APLFQ8IW19 511 aaPredicted RBP16.72■□□□□ 0.27
MBD1-222ENST00000590208 FAM71AQ8IYT1 594 aa16.72■□□□□ 0.27
MBD1-222ENST00000590208 DRAXINQ8NBI3 349 aaPredicted RBP16.72■□□□□ 0.27
MBD1-222ENST00000590208 GRK7Q8WTQ7 553 aa16.72■□□□□ 0.27
MBD1-222ENST00000590208 FAM20AQ96MK3 541 aa16.72■□□□□ 0.27
MBD1-222ENST00000590208 CBWD1Q9BRT8 395 aa16.72■□□□□ 0.27
MBD1-222ENST00000590208 PLVAPQ9BX97 442 aa16.72■□□□□ 0.27
MBD1-222ENST00000590208 MAK16Q9BXY0 300 aaKnown RBP16.72■□□□□ 0.27
MBD1-222ENST00000590208 ZSCAN5DPP0CG00 497 aa16.71■□□□□ 0.27
MBD1-222ENST00000590208 RFX1P22670 979 aa16.71■□□□□ 0.27
MBD1-222ENST00000590208 ADRA1DP25100 572 aa16.71■□□□□ 0.27
MBD1-222ENST00000590208 PIK3CAP42336 1068 aa16.71■□□□□ 0.27
MBD1-222ENST00000590208 VAMP7P51809 220 aa16.71■□□□□ 0.27
MBD1-222ENST00000590208 DDB1Q16531 1140 aa16.71■□□□□ 0.27
MBD1-222ENST00000590208 SCYL3Q8IZE3 742 aa16.71■□□□□ 0.27
MBD1-222ENST00000590208 FBXO6Q9NRD1 293 aaPredicted RBP16.71■□□□□ 0.27
MBD1-222ENST00000590208 PSMG1O95456 288 aa16.71■□□□□ 0.27
MBD1-222ENST00000590208 PLS3P13797 630 aa16.71■□□□□ 0.27
MBD1-222ENST00000590208 CYP11B1P15538 503 aa16.71■□□□□ 0.27
MBD1-222ENST00000590208 SHMT1P34896 483 aa16.71■□□□□ 0.27
MBD1-222ENST00000590208 NEK3P51956 506 aa16.71■□□□□ 0.27
MBD1-222ENST00000590208 SLC34A1Q06495 639 aa16.71■□□□□ 0.27
MBD1-222ENST00000590208 CUL3Q13618 768 aa16.71■□□□□ 0.27
MBD1-222ENST00000590208 TBC1D10BQ4KMP7 808 aaPredicted RBP16.71■□□□□ 0.27
MBD1-222ENST00000590208 SYDE2Q5VT97 1194 aa16.71■□□□□ 0.27
MBD1-222ENST00000590208 SYDE1Q6ZW31 735 aaPredicted RBP16.71■□□□□ 0.27
MBD1-222ENST00000590208 ANKS1BQ7Z6G8 1248 aa16.71■□□□□ 0.27
MBD1-222ENST00000590208 DHX38Q92620 1227 aaKnown RBP16.71■□□□□ 0.27
MBD1-222ENST00000590208 GATA6Q92908 595 aa16.71■□□□□ 0.27
MBD1-222ENST00000590208 BTBD10Q9BSF8 475 aa16.71■□□□□ 0.27
MBD1-222ENST00000590208 UVRAGQ9P2Y5 699 aa16.71■□□□□ 0.27
MBD1-222ENST00000590208 SERPINB13Q9UIV8 391 aa16.71■□□□□ 0.27
MBD1-222ENST00000590208 DAGLAQ9Y4D2 1042 aa16.71■□□□□ 0.27
MBD1-222ENST00000590208 C2orf71A6NGG8 1288 aa16.7■□□□□ 0.26
MBD1-222ENST00000590208 GYG2O15488 501 aa16.7■□□□□ 0.26
MBD1-222ENST00000590208 CCDC22O60826 627 aa16.7■□□□□ 0.26
MBD1-222ENST00000590208 ADRA2BP18089 450 aa16.7■□□□□ 0.26
MBD1-222ENST00000590208 GJC1P36383 396 aa16.7■□□□□ 0.26
MBD1-222ENST00000590208 AP3B2Q13367 1082 aa16.7■□□□□ 0.26
MBD1-222ENST00000590208 GSTA5Q7RTV2 222 aa16.7■□□□□ 0.26
MBD1-222ENST00000590208 GJD4Q96KN9 370 aaPredicted RBP16.7■□□□□ 0.26
MBD1-222ENST00000590208 NYXQ9GZU5 481 aa16.7■□□□□ 0.26
MBD1-222ENST00000590208 VPS37BQ9H9H4 285 aa16.7■□□□□ 0.26
MBD1-222ENST00000590208 KRT82Q9NSB4 513 aa16.7■□□□□ 0.26
MBD1-222ENST00000590208 HEY2Q9UBP5 337 aa16.7■□□□□ 0.26
MBD1-222ENST00000590208 RXRBP28702 533 aa16.7■□□□□ 0.26
MBD1-222ENST00000590208 CETN1Q12798 172 aa16.7■□□□□ 0.26
MBD1-222ENST00000590208 RINLQ6ZS11 566 aa16.7■□□□□ 0.26
MBD1-222ENST00000590208 FHDC1Q9C0D6 1143 aaPredicted RBP16.7■□□□□ 0.26
MBD1-222ENST00000590208 OCEL1Q9H607 264 aa16.7■□□□□ 0.26
MBD1-222ENST00000590208 SBF2Q86WG5 1849 aa16.7■□□□□ 0.26
MBD1-222ENST00000590208 PLSCR1O15162 318 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 TYROBPO43914 113 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 BANF1O75531 89 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 ETS1P14921 441 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 KRT4P19013 534 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 TPTE2Q6XPS3 522 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 CCDC89Q8N998 374 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 SEMA4DQ92854 862 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 DDX27Q96GQ7 796 aaKnown RBP16.69■□□□□ 0.26
MBD1-222ENST00000590208 CFAP57Q96MR6 1250 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 TRAPPC9Q96Q05 1148 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 KLF6Q99612 283 aaPredicted RBP16.69■□□□□ 0.26
MBD1-222ENST00000590208 UBE2OQ9C0C9 1292 aaKnown RBP16.69■□□□□ 0.26
MBD1-222ENST00000590208 SAR1AQ9NR31 198 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 RPL26L1Q9UNX3 145 aaKnown RBP16.69■□□□□ 0.26
MBD1-222ENST00000590208 GOLGA8IPA6NC78 632 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 GOLGA8JA6NMD2 632 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 GOLGA8RI6L899 631 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 FDX1P10109 184 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 SREBF1P36956 1147 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 RANBP1P43487 201 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 VPS72Q15906 364 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 ARHGAP22Q7Z5H3 698 aa16.69■□□□□ 0.26
MBD1-222ENST00000590208 VPS52Q8N1B4 723 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms