RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 VAV2P52735 878 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 MYL6P60660 151 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 NOP14P78316 857 aaKnown RBP11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 PTK2Q05397 1052 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 PAK2Q13177 524 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 CUL2Q13617 745 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 MTFR1Q15390 333 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 XKR4Q5GH76 650 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 ALKAL1Q6UXT8 129 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 NYAP1Q6ZVC0 841 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 EFCAB13Q8IY85 973 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 TTC39CQ8N584 583 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 WNT8BQ93098 351 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 PGBD4Q96DM1 585 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 KREMEN1Q96MU8 473 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 AGPAT1Q99943 283 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 PI4K2AQ9BTU6 479 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 EIF2AQ9BY44 585 aaKnown RBP11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 MTMR12Q9C0I1 747 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 TRPV6Q9H1D0 765 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 UBN1Q9NPG3 1134 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 DPP3Q9NY33 737 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 MYO1AQ9UBC5 1043 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 ADAMTS1Q9UHI8 967 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 AJAP1Q9UKB5 411 aaPredicted RBP11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 PADI3Q9ULW8 664 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 UBQLN1Q9UMX0 589 aaKnown RBP11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 PCDHA13Q9Y5I0 950 aa11.28□□□□□ -0.6
CHMP1B-202ENST00000588284 TNRC18O15417 2968 aaPredicted RBP11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 USP27XA6NNY8 438 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 KIF5CO60282 957 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 LRRN2O75325 713 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 CLSTN1O94985 981 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 PARNO95453 639 aaKnown RBP11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 KRT19P08727 400 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 CKBP12277 381 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 ITGA4P13612 1032 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 ATF7P17544 494 aaPredicted RBP11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 CYP3A5P20815 502 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 CTCFP49711 727 aaPredicted RBP11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 ETF1P62495 437 aaKnown RBP11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 MYO1EQ12965 1108 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 NAB2Q15742 525 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 ZBTB6Q15916 424 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 ZNF699Q32M78 642 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 ZNF667Q5HYK9 610 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 ZNF618Q5T7W0 954 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 ZNF571Q7Z3V5 609 aaPredicted RBP11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 MRPL10Q7Z7H8 261 aaKnown RBP11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 ZNF677Q86XU0 584 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 ACRBPQ8NEB7 543 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 SNX27Q96L92 541 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 IFIH1Q9BYX4 1025 aaKnown RBP11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 GPR88Q9GZN0 384 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 NIF3L1Q9GZT8 377 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 CRISPLD2Q9H0B8 497 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 VRTNQ9H8Y1 702 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 CYP3A43Q9HB55 503 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 FAM105AQ9NUU6 356 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 CNTN3Q9P232 1028 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 INTUQ9ULD6 942 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 AGAP1Q9UPQ3 857 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 GIT1Q9Y2X7 761 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 IPPQ9Y573 584 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 NUB1Q9Y5A7 615 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 PAXBP1Q9Y5B6 917 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 PCDHB2Q9Y5E7 798 aa11.27□□□□□ -0.61
CHMP1B-202ENST00000588284 A0A087X0T9 212 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 PJA2O43164 708 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 CYP26A1O43174 497 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 RECQL4O94761 1208 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 NFICP08651 508 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 FAM228BP0C875 321 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 GHRP10912 638 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 HSPA8P11142 646 aaKnown RBP11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 KRT5P13647 590 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 SELPP16109 830 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 CD52P31358 61 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 CYP27A1Q02318 531 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 GFPT1Q06210 699 aaPredicted RBP11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 LPIN1Q14693 890 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 CCDC122Q5T0U0 273 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 PPP1R2P3Q6NXS1 205 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 ALKBH5Q6P6C2 394 aaKnown RBP11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 MAMSTRQ6ZN01 415 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 RNF10Q8N5U6 811 aaKnown RBP11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 C1orf127Q8N9H9 656 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 ANKLE1Q8NAG6 615 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 SMG8Q8ND04 991 aaKnown RBP11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 KIF18AQ8NI77 898 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 KAT5Q92993 513 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 ARMC5Q96C12 935 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 HPDLQ96IR7 371 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 C16orf45Q96MC5 204 aaPredicted RBP11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 APOL6Q9BWW8 343 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 FTHL17Q9BXU8 183 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 DNAI2Q9GZS0 605 aa11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 AGO3Q9H9G7 860 aaKnown RBP11.26□□□□□ -0.61
CHMP1B-202ENST00000588284 APOBEC3GQ9HC16 384 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms