RNA–Protein interactions for RNA: ENST00000585956.5

PTBP1-208, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-208ENST00000585956 RSPO4Q2I0M5 234 aaPredicted RBP21.39■■□□□ 1.01
PTBP1-208ENST00000585956 ZBTB41Q5SVQ8 909 aa21.39■■□□□ 1.01
PTBP1-208ENST00000585956 MPZL3Q6UWV2 235 aa21.39■■□□□ 1.01
PTBP1-208ENST00000585956 RNF19BQ6ZMZ0 732 aa21.39■■□□□ 1.01
PTBP1-208ENST00000585956 PNMA5Q96PV4 448 aa21.39■■□□□ 1.01
PTBP1-208ENST00000585956 KMT5AQ9NQR1 393 aa21.39■■□□□ 1.01
PTBP1-208ENST00000585956 NDRG2Q9UN36 371 aaKnown RBP21.39■■□□□ 1.01
PTBP1-208ENST00000585956 MYH11P35749 1972 aa21.38■■□□□ 1.01
PTBP1-208ENST00000585956 NPHP3-ACAD11A0A0J9YXS1 232 aa21.38■■□□□ 1.01
PTBP1-208ENST00000585956 TRAPPC3O43617 180 aa21.38■■□□□ 1.01
PTBP1-208ENST00000585956 TGM1P22735 817 aa21.38■■□□□ 1.01
PTBP1-208ENST00000585956 U2AF2P26368 475 aaKnown RBP eCLIP21.38■■□□□ 1.011e-39■■■■□ 25.2
PTBP1-208ENST00000585956 ADCY1Q08828 1119 aa21.38■■□□□ 1.01
PTBP1-208ENST00000585956 TWF1Q12792 350 aa21.38■■□□□ 1.01
PTBP1-208ENST00000585956 CTXN3Q4LDR2 81 aa21.38■■□□□ 1.01
PTBP1-208ENST00000585956 RTL10Q7L3V2 364 aa21.38■■□□□ 1.01
PTBP1-208ENST00000585956 GPIHBP1Q8IV16 184 aa21.38■■□□□ 1.01
PTBP1-208ENST00000585956 LRRC15Q8TF66 581 aa21.38■■□□□ 1.01
PTBP1-208ENST00000585956 DDX12PQ92771 950 aa21.38■■□□□ 1.01
PTBP1-208ENST00000585956 SUSD3Q96L08 255 aa21.38■■□□□ 1.01
PTBP1-208ENST00000585956 TBC1D32Q96NH3 1257 aa21.38■■□□□ 1.01
PTBP1-208ENST00000585956 ACAP3Q96P50 834 aa21.38■■□□□ 1.01
PTBP1-208ENST00000585956 PLIN2Q99541 437 aa21.38■■□□□ 1.01
PTBP1-208ENST00000585956 LLPHQ9BRT6 129 aaKnown RBP21.38■■□□□ 1.01
PTBP1-208ENST00000585956 TOPORSQ9NS56 1045 aaPredicted RBP21.38■■□□□ 1.01
PTBP1-208ENST00000585956 ANKFY1Q9P2R3 1169 aa21.38■■□□□ 1.01
PTBP1-208ENST00000585956 TIMM13Q9Y5L4 95 aaPredicted RBP21.38■■□□□ 1.01
PTBP1-208ENST00000585956 SYN3O14994 580 aa21.37■■□□□ 1.01
PTBP1-208ENST00000585956 CXCL8P10145 99 aa21.37■■□□□ 1.01
PTBP1-208ENST00000585956 TRAPPC10P48553 1259 aa21.37■■□□□ 1.01
PTBP1-208ENST00000585956 CACNB1Q02641 598 aaPredicted RBP21.37■■□□□ 1.01
PTBP1-208ENST00000585956 DMP1Q13316 513 aaPredicted RBP21.37■■□□□ 1.01
PTBP1-208ENST00000585956 PDIA5Q14554 519 aa21.37■■□□□ 1.01
PTBP1-208ENST00000585956 MAP4K3Q8IVH8 894 aa21.37■■□□□ 1.01
PTBP1-208ENST00000585956 TMEM161BQ8NDZ6 487 aa21.37■■□□□ 1.01
PTBP1-208ENST00000585956 LRRC3Q9BY71 257 aa21.37■■□□□ 1.01
PTBP1-208ENST00000585956 PARD6AQ9NPB6 346 aa21.37■■□□□ 1.01
PTBP1-208ENST00000585956 SMG5Q9UPR3 1016 aaKnown RBP21.37■■□□□ 1.01
PTBP1-208ENST00000585956 ZFHX4Q86UP3 3567 aa21.37■■□□□ 1.01
PTBP1-208ENST00000585956 ANK1P16157 1881 aa21.37■■□□□ 1.01
PTBP1-208ENST00000585956 ARNTLO00327 626 aa21.36■■□□□ 1.01
PTBP1-208ENST00000585956 PPEF2O14830 753 aa21.36■■□□□ 1.01
PTBP1-208ENST00000585956 ELF1P32519 619 aa21.36■■□□□ 1.01
PTBP1-208ENST00000585956 TNFSF9P41273 254 aa21.36■■□□□ 1.01
PTBP1-208ENST00000585956 RPS9P46781 194 aaKnown RBP21.36■■□□□ 1.01
PTBP1-208ENST00000585956 CDR1P51861 262 aa21.36■■□□□ 1.01
PTBP1-208ENST00000585956 GAS6Q14393 721 aa21.36■■□□□ 1.01
PTBP1-208ENST00000585956 TEAD2Q15562 447 aa21.36■■□□□ 1.01
PTBP1-208ENST00000585956 STXBP5Q5T5C0 1151 aa21.36■■□□□ 1.01
PTBP1-208ENST00000585956 ZNF852Q6ZMS4 543 aa21.36■■□□□ 1.01
PTBP1-208ENST00000585956 SHKBP1Q8TBC3 707 aa21.36■■□□□ 1.01
PTBP1-208ENST00000585956 TCHPQ9BT92 498 aa21.36■■□□□ 1.01
PTBP1-208ENST00000585956 DNAJC25Q9H1X3 360 aa21.36■■□□□ 1.01
PTBP1-208ENST00000585956 EPC1Q9H2F5 836 aa21.36■■□□□ 1.01
PTBP1-208ENST00000585956 SLC38A7Q9NVC3 462 aa21.36■■□□□ 1.01
PTBP1-208ENST00000585956 ZSCAN32Q9NX65 697 aa21.36■■□□□ 1.01
PTBP1-208ENST00000585956 DNM3Q9UQ16 869 aa21.36■■□□□ 1.01
PTBP1-208ENST00000585956 PCDHGA2Q9Y5H1 932 aa21.36■■□□□ 1.01
PTBP1-208ENST00000585956 MAPTP10636 758 aaKnown RBP21.35■■□□□ 1.01
PTBP1-208ENST00000585956 MYL4P12829 197 aa21.35■■□□□ 1.01
PTBP1-208ENST00000585956 MCM4P33991 863 aa21.35■■□□□ 1.01
PTBP1-208ENST00000585956 PUM1Q14671 1186 aaKnown RBP eCLIP21.35■■□□□ 1.019e-10■□□□□ 11
PTBP1-208ENST00000585956 ZRSR1Q15695 479 aaKnown RBP21.35■■□□□ 1.01
PTBP1-208ENST00000585956 PDZD4Q76G19 769 aaPredicted RBP21.35■■□□□ 1.01
PTBP1-208ENST00000585956 TMC8Q8IU68 726 aa21.35■■□□□ 1.01
PTBP1-208ENST00000585956 TTC9BQ8N6N2 239 aa21.35■■□□□ 1.01
PTBP1-208ENST00000585956 LRRC3BQ96PB8 259 aa21.35■■□□□ 1.01
PTBP1-208ENST00000585956 PGLYRP2Q96PD5 576 aa21.35■■□□□ 1.01
PTBP1-208ENST00000585956 BRD9Q9H8M2 597 aa21.35■■□□□ 1.01
PTBP1-208ENST00000585956 ZFP14Q9HCL3 533 aa21.35■■□□□ 1.01
PTBP1-208ENST00000585956 ZNF334Q9HCZ1 680 aaPredicted RBP21.35■■□□□ 1.01
PTBP1-208ENST00000585956 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.35■■□□□ 1.01
PTBP1-208ENST00000585956 C2orf42Q9NWW7 574 aa21.35■■□□□ 1.01
PTBP1-208ENST00000585956 NUB1Q9Y5A7 615 aa21.35■■□□□ 1.01
PTBP1-208ENST00000585956 TSC2P49815 1807 aa21.34■■□□□ 1.01
PTBP1-208ENST00000585956 SPTLC1O15269 473 aa21.34■■□□□ 1.01
PTBP1-208ENST00000585956 GDI1P31150 447 aa21.34■■□□□ 1.01
PTBP1-208ENST00000585956 RPL9P32969 192 aaKnown RBP21.34■■□□□ 1.01
PTBP1-208ENST00000585956 EPHA5P54756 1037 aa21.34■■□□□ 1.01
PTBP1-208ENST00000585956 DMWDQ09019 674 aa21.34■■□□□ 1.01
PTBP1-208ENST00000585956 GNL2Q13823 731 aaKnown RBP21.34■■□□□ 1.01
PTBP1-208ENST00000585956 NOLC1Q14978 699 aaKnown RBP eCLIP21.34■■□□□ 1.01
PTBP1-208ENST00000585956 LPAL2Q16609 132 aa21.34■■□□□ 1.01
PTBP1-208ENST00000585956 BEST2Q8NFU1 509 aa21.34■■□□□ 1.01
PTBP1-208ENST00000585956 DNASE1L2Q92874 299 aa21.34■■□□□ 1.01
PTBP1-208ENST00000585956 DRC1Q96MC2 740 aa21.34■■□□□ 1.01
PTBP1-208ENST00000585956 TMEM209Q96SK2 561 aa21.34■■□□□ 1.01
PTBP1-208ENST00000585956 NTPCRQ9BSD7 190 aaKnown RBP21.34■■□□□ 1.01
PTBP1-208ENST00000585956 TRMT61BQ9BVS5 477 aaKnown RBP21.34■■□□□ 1.01
PTBP1-208ENST00000585956 NCDNQ9UBB6 729 aa21.34■■□□□ 1.01
PTBP1-208ENST00000585956 AFF4Q9UHB7 1163 aaKnown RBP21.34■■□□□ 1.01
PTBP1-208ENST00000585956 NOL7Q9UMY1 257 aaKnown RBP21.34■■□□□ 1.01
PTBP1-208ENST00000585956 PCDHB8Q9UN66 801 aa21.34■■□□□ 1.01
PTBP1-208ENST00000585956 YIPF1Q9Y548 306 aa21.34■■□□□ 1.01
PTBP1-208ENST00000585956 EPG5Q9HCE0 2579 aa21.33■■□□□ 1.01
PTBP1-208ENST00000585956 H7C4K7 107 aa21.33■■□□□ 1.01
PTBP1-208ENST00000585956 FAM189A1O60320 539 aa21.33■■□□□ 1.01
PTBP1-208ENST00000585956 SOAT2O75908 522 aa21.33■■□□□ 1.01
PTBP1-208ENST00000585956 GUCY2CP25092 1073 aa21.33■■□□□ 1.01
PTBP1-208ENST00000585956 SOX9P48436 509 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms