RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 SLC7A14Q8TBB6 771 aa2.26□□□□□ -2.05
SMCHD1-211ENST00000584897 ZNF384Q8TF68 577 aa2.26□□□□□ -2.05
SMCHD1-211ENST00000584897 CAPNS2Q96L46 248 aa2.26□□□□□ -2.05
SMCHD1-211ENST00000584897 ADOQ96SZ5 270 aa2.26□□□□□ -2.05
SMCHD1-211ENST00000584897 MYD88Q99836 296 aa2.26□□□□□ -2.05
SMCHD1-211ENST00000584897 KCNK12Q9HB15 430 aa2.26□□□□□ -2.05
SMCHD1-211ENST00000584897 BCCIPQ9P287 314 aaKnown RBP eCLIP2.26□□□□□ -2.05
SMCHD1-211ENST00000584897 SNX13Q9Y5W8 968 aa2.26□□□□□ -2.05
SMCHD1-211ENST00000584897 COL3A1P02461 1466 aaPredicted RBP2.26□□□□□ -2.05
SMCHD1-211ENST00000584897 A0A0G2JNJ9 132 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 ZNF839A8K0R7 811 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 NEMP1O14524 444 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 MGEA5O60502 916 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 DNAJC8O75937 253 aaPredicted RBP2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 HMGCRP04035 888 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 FBLN1P23142 703 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 PTGS1P23219 599 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 STAT5AP42229 794 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 TRAPPC10P48553 1259 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 SLC16A1P53985 500 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 NFYCQ13952 458 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 FHL2Q14192 279 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 WDR43Q15061 677 aaKnown RBP eCLIP2.25□□□□□ -2.054e-6■□□□□ 9.3
SMCHD1-211ENST00000584897 SAFBQ15424 915 aaKnown RBP eCLIP2.25□□□□□ -2.056e-7■□□□□ 8.9
SMCHD1-211ENST00000584897 UAP1L1Q3KQV9 507 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 FAM102BQ5T8I3 360 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 LHFPL2Q6ZUX7 228 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 TOM1L2Q6ZVM7 507 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 USP30Q70CQ3 517 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 TPH2Q8IWU9 490 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 GRAMD1CQ8IYS0 662 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 RTF1Q92541 710 aaKnown RBP2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 HAS1Q92839 578 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 CRAMP1Q96RY5 1269 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 MAP3K14Q99558 947 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 SLC6A15Q9H2J7 730 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 ADAM7Q9H2U9 754 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 RNF181Q9P0P0 153 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 Q9UFV3 132 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 hCG_1642624A0A1W2PR95 340 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 PTPDC1A2A3K4 754 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 KLHL33A6NCF5 533 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 ZNF891A8MT65 544 aaPredicted RBP2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 DIRC3C9JPN6 131 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 ERC2O15083 957 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 FYB1O15117 783 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 SOD2P04179 222 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 RPLP2P05387 115 aaKnown RBP2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 ACRV1P26436 265 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 LSP1P33241 339 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 MECP2P51608 486 aaKnown RBP2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 IFIT5Q13325 482 aaKnown RBP2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 DGKDQ16760 1214 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 GAGE13Q4V321 117 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 GRAMD4Q6IC98 578 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 DENND5AQ6IQ26 1287 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 CLEC4GQ6UXB4 293 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 KCTD1Q719H9 257 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 FGD2Q7Z6J4 655 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 DGKHQ86XP1 1220 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 FAM186BQ8IYM0 893 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 CHST14Q8NCH0 376 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 PARD3BQ8TEW8 1205 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 ERCC4Q92889 916 aaPredicted RBP2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 SLC5A5Q92911 643 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 TCF25Q9BQ70 676 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 HEPHQ9BQS7 1158 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 PAGR1Q9BTK6 254 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 NYXQ9GZU5 481 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 KCNH7Q9NS40 1196 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 TFCP2L1Q9NZI6 479 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 ANAPC4Q9UJX5 808 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 PNMA8BQ9ULN7 279 aaPredicted RBP2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 MAGED2Q9UNF1 606 aaPredicted RBP2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 COQ6Q9Y2Z9 468 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 CAPN14A8MX76 684 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 STARD3NLO95772 234 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 MAN2A2P49641 1150 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 NPEPPSP55786 919 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 GNAI1P63096 354 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 MCL1Q07820 350 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 TRIM14Q14142 442 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 FBXO46Q6PJ61 603 aaPredicted RBP2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 TMC5Q6UXY8 1006 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 MAGEB6Q8N7X4 407 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 SYT8Q8NBV8 401 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 OSBP2Q969R2 916 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 RUNDC1Q96C34 613 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 FUBP3Q96I24 572 aaKnown RBP eCLIP2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 NOX5Q96PH1 765 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 LRRC37BQ96QE4 947 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 ELAC2Q9BQ52 826 aaKnown RBP2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 ASPSCR1Q9BZE9 553 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 C14orf119Q9NWQ9 140 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 DNAJC28Q9NX36 388 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 SLC30A1Q9Y6M5 507 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 COL15A1P39059 1388 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 UBR2Q8IWV8 1755 aa2.25□□□□□ -2.05
SMCHD1-211ENST00000584897 DDX58O95786 925 aaKnown RBP2.24□□□□□ -2.05
SMCHD1-211ENST00000584897 PLA2G1BP04054 148 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms